Wall clock time and date at job start Mon Mar 8 2021 10:39:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.32565 * 1 3 3 C 1.47818 * 119.99971 * 2 1 4 4 C 1.39551 * 120.10328 * 132.82762 * 3 2 1 5 5 C 1.38044 * 120.00404 * 180.02562 * 4 3 2 6 6 C 1.38193 * 120.22439 * 359.97438 * 5 4 3 7 7 C 1.50691 * 119.89430 * 179.97438 * 6 5 4 8 8 O 1.42899 * 109.47338 * 255.00053 * 7 6 5 9 9 Si 1.86303 * 109.47382 * 15.00010 * 7 6 5 10 10 H 1.48492 * 109.47136 * 299.99935 * 9 7 6 11 11 H 1.48501 * 109.47097 * 179.97438 * 9 7 6 12 12 H 1.48500 * 109.46842 * 60.00097 * 9 7 6 13 13 C 1.39030 * 120.20890 * 0.23433 * 6 5 4 14 14 N 1.39688 * 120.00178 * 179.72485 * 13 6 5 15 15 C 1.47017 * 110.99996 * 243.63337 * 14 13 6 16 16 C 1.53098 * 109.26022 * 177.61063 * 15 14 13 17 17 O 1.43013 * 109.25757 * 56.84835 * 16 15 14 18 18 C 1.43021 * 113.74119 * 301.33267 * 17 16 15 19 19 C 1.47015 * 111.00202 * 120.00317 * 14 13 6 20 20 C 1.38650 * 119.98797 * 359.51143 * 13 6 5 21 21 Si 1.86795 * 119.99755 * 180.02562 * 2 1 3 22 22 C 1.86306 * 109.46954 * 174.67911 * 21 2 1 23 23 C 1.86299 * 109.47264 * 294.67626 * 21 2 1 24 24 C 1.86295 * 109.47484 * 54.67770 * 21 2 1 25 25 H 1.08004 * 119.99796 * 179.97438 * 1 2 3 26 26 H 1.07999 * 120.00112 * 0.02562 * 1 2 3 27 27 H 1.08001 * 119.99950 * 359.97438 * 4 3 2 28 28 H 1.08007 * 119.88875 * 179.97438 * 5 4 3 29 29 H 1.09004 * 109.47359 * 134.99983 * 7 6 5 30 30 H 0.96692 * 114.00020 * 59.99960 * 8 7 6 31 31 H 1.08998 * 109.50967 * 297.54530 * 15 14 13 32 32 H 1.09001 * 109.50388 * 57.67763 * 15 14 13 33 33 H 1.09008 * 109.50226 * 296.91716 * 16 15 14 34 34 H 1.08995 * 109.50509 * 176.78685 * 16 15 14 35 35 H 1.09005 * 109.49956 * 298.73740 * 18 17 16 36 36 H 1.09001 * 109.54131 * 178.62915 * 18 17 16 37 37 H 1.09001 * 109.50388 * 302.32791 * 19 14 13 38 38 H 1.09007 * 109.50762 * 62.40616 * 19 14 13 39 39 H 1.08000 * 120.10422 * 180.22995 * 20 13 6 40 40 H 1.08998 * 109.46970 * 68.25640 * 22 21 2 41 41 H 1.09004 * 109.47062 * 188.25996 * 22 21 2 42 42 H 1.09000 * 109.46853 * 308.25386 * 22 21 2 43 43 H 1.08998 * 109.47308 * 60.00048 * 23 21 2 44 44 H 1.08999 * 109.47548 * 180.02562 * 23 21 2 45 45 H 1.09010 * 109.47146 * 300.00183 * 23 21 2 46 46 H 1.08997 * 109.47190 * 59.99774 * 24 21 2 47 47 H 1.08997 * 109.47318 * 179.97438 * 24 21 2 48 48 H 1.08997 * 109.47124 * 300.00159 * 24 21 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.3256 0.0000 0.0000 3 6 2.0647 1.2801 0.0000 4 6 3.1254 1.4760 0.8854 5 6 3.8139 2.6725 0.8840 6 6 3.4570 3.6794 0.0074 7 6 4.2133 4.9828 0.0127 8 8 3.4205 5.9910 0.6427 9 14 5.8090 4.7712 0.9507 10 1 5.5117 4.3659 2.3480 11 1 6.5545 6.0555 0.9553 12 1 6.6329 3.7235 0.2959 13 6 2.3990 3.4957 -0.8756 14 7 2.0382 4.5186 -1.7559 15 6 0.6788 5.0017 -1.4734 16 6 0.3473 6.1589 -2.4194 17 8 0.4955 5.7195 -3.7722 18 6 1.8078 5.2428 -4.0823 19 6 2.1540 4.0764 -3.1532 20 6 1.7049 2.2955 -0.8853 21 14 2.2596 -1.6177 -0.0007 22 6 4.0847 -1.2810 -0.1635 23 6 1.9350 -2.5229 1.5949 24 6 1.6906 -2.6627 -1.4342 25 1 -0.5400 -0.9354 -0.0004 26 1 -0.5400 0.9353 -0.0004 27 1 3.4072 0.6917 1.5724 28 1 4.6343 2.8222 1.5704 29 1 4.4316 5.2804 -1.0130 30 1 3.1880 5.7924 1.5600 31 1 -0.0344 4.1916 -1.6256 32 1 0.6227 5.3478 -0.4413 33 1 1.0271 6.9898 -2.2301 34 1 -0.6799 6.4828 -2.2523 35 1 2.5299 6.0471 -3.9413 36 1 1.8375 4.9044 -5.1181 37 1 3.1747 3.7470 -3.3473 38 1 1.4649 3.2509 -3.3320 39 1 0.8850 2.1494 -1.5730 40 1 4.4472 -0.7975 0.7436 41 1 4.6159 -2.2214 -0.3112 42 1 4.2587 -0.6273 -1.0181 43 1 0.8672 -2.7199 1.6902 44 1 2.4803 -3.4667 1.5947 45 1 2.2679 -1.9115 2.4337 46 1 1.8805 -2.1331 -2.3678 47 1 2.2359 -3.6065 -1.4349 48 1 0.6228 -2.8597 -1.3390 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_271570_14761194_12419860.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 10:39:14 Heat of formation + Delta-G solvation = -62.778207 kcal Electronic energy + Delta-G solvation = -26223.920170 eV Core-core repulsion = 22788.798750 eV Total energy + Delta-G solvation = -3435.121420 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 321.167 amu Computer time = 0.81 seconds Orbital eigenvalues (eV) -41.53955 -39.75734 -37.64001 -36.70882 -34.77723 -32.15113 -31.32138 -31.19240 -29.60000 -28.49282 -28.45526 -27.65293 -26.29663 -24.95872 -23.77664 -22.72030 -21.24133 -20.37277 -18.45985 -17.86679 -17.08860 -17.02789 -16.56038 -16.31008 -16.09602 -15.93820 -15.64798 -15.53836 -15.25317 -14.79724 -14.60996 -14.38055 -14.24095 -14.06415 -13.93847 -13.68915 -13.53110 -13.39877 -13.34659 -13.20760 -13.14125 -13.01263 -12.62392 -12.47631 -12.34375 -12.12297 -11.97449 -11.69743 -11.47946 -11.36980 -10.98963 -10.93788 -10.66503 -10.48680 -10.25846 -9.78691 -9.46806 -9.23466 0.03337 0.30085 1.08231 1.21936 1.43215 1.55026 1.65596 1.80213 1.95234 2.03043 2.47513 2.65252 2.75687 2.95339 3.60567 3.76892 3.83423 3.91946 3.95091 4.00790 4.16727 4.22946 4.24314 4.26999 4.46524 4.53850 4.59707 4.63071 4.64275 4.67263 4.68429 4.69305 4.70693 4.71158 4.73978 4.78276 4.81799 4.90323 4.95283 5.02571 5.14090 5.34435 5.39242 5.41993 5.47026 5.51588 5.53789 5.68425 5.81338 5.85128 6.20193 6.36867 6.68669 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.125 4.125 2 C -0.374 4.374 3 C -0.018 4.018 4 C -0.112 4.112 5 C -0.120 4.120 6 C -0.103 4.103 7 C -0.059 4.059 8 O -0.529 6.529 9 Si 0.938 3.062 10 H -0.253 1.253 11 H -0.254 1.254 12 H -0.250 1.250 13 C 0.116 3.884 14 N -0.492 5.492 15 C 0.029 3.971 16 C 0.064 3.936 17 O -0.385 6.385 18 C 0.064 3.936 19 C 0.019 3.981 20 C -0.145 4.145 21 Si 1.048 2.952 22 C -0.447 4.447 23 C -0.448 4.448 24 C -0.448 4.448 25 H 0.104 0.896 26 H 0.092 0.908 27 H 0.129 0.871 28 H 0.126 0.874 29 H 0.118 0.882 30 H 0.369 0.631 31 H 0.043 0.957 32 H 0.090 0.910 33 H 0.064 0.936 34 H 0.099 0.901 35 H 0.062 0.938 36 H 0.100 0.900 37 H 0.088 0.912 38 H 0.047 0.953 39 H 0.120 0.880 40 H 0.071 0.929 41 H 0.070 0.930 42 H 0.070 0.930 43 H 0.069 0.931 44 H 0.072 0.928 45 H 0.070 0.930 46 H 0.070 0.930 47 H 0.072 0.928 48 H 0.069 0.931 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.310 -2.540 1.183 2.819 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.162 4.162 2 C -0.415 4.415 3 C -0.018 4.018 4 C -0.130 4.130 5 C -0.138 4.138 6 C -0.104 4.104 7 C -0.171 4.171 8 O -0.333 6.333 9 Si 0.761 3.239 10 H -0.177 1.177 11 H -0.178 1.178 12 H -0.174 1.174 13 C 0.022 3.978 14 N -0.214 5.214 15 C -0.098 4.098 16 C -0.013 4.013 17 O -0.304 6.304 18 C -0.013 4.013 19 C -0.108 4.108 20 C -0.165 4.165 21 Si 1.240 2.760 22 C -0.555 4.555 23 C -0.555 4.555 24 C -0.556 4.556 25 H 0.123 0.877 26 H 0.111 0.889 27 H 0.147 0.853 28 H 0.144 0.856 29 H 0.136 0.864 30 H 0.215 0.785 31 H 0.061 0.939 32 H 0.109 0.891 33 H 0.083 0.917 34 H 0.117 0.883 35 H 0.081 0.919 36 H 0.118 0.882 37 H 0.106 0.894 38 H 0.065 0.935 39 H 0.138 0.862 40 H 0.090 0.910 41 H 0.089 0.911 42 H 0.090 0.910 43 H 0.088 0.912 44 H 0.091 0.909 45 H 0.089 0.911 46 H 0.089 0.911 47 H 0.091 0.909 48 H 0.088 0.912 Dipole moment (debyes) X Y Z Total from point charges 1.278 -1.864 0.955 2.453 hybrid contribution -0.945 -0.913 0.372 1.366 sum 0.332 -2.777 1.327 3.096 Atomic orbital electron populations 1.24248 0.95508 1.01815 0.94621 1.28043 1.01016 1.08197 1.04256 1.18856 0.95012 0.93052 0.94912 1.21212 0.95353 0.97365 0.99057 1.21018 1.00249 0.93717 0.98810 1.20213 0.97064 0.96537 0.96629 1.24763 1.01323 0.86886 1.04093 1.86568 1.73466 1.43426 1.29856 0.85929 0.77120 0.81017 0.79789 1.17743 1.17783 1.17358 1.18431 0.95149 0.89651 0.94544 1.59770 1.25871 1.33614 1.02097 1.22799 0.87609 0.98045 1.01330 1.22684 1.02246 0.95416 0.80943 1.88008 1.30844 1.83077 1.28438 1.22669 0.84870 0.95323 0.98409 1.22901 1.02543 0.97711 0.87626 1.21837 1.00562 0.93638 1.00425 0.78367 0.66488 0.63473 0.67688 1.26200 1.19376 1.05000 1.04912 1.26126 1.05054 1.08221 1.16132 1.26122 1.05968 1.09433 1.14053 0.87742 0.88929 0.85295 0.85599 0.86414 0.78532 0.93895 0.89135 0.91729 0.88309 0.91945 0.88243 0.89386 0.93497 0.86190 0.90989 0.91104 0.91050 0.91185 0.90922 0.91089 0.91117 0.90902 0.91229 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 0.11 13.32 28.82 0.38 0.49 16 2 C -0.37 0.25 4.40 -37.57 -0.17 0.09 16 3 C -0.02 -0.01 5.22 -105.04 -0.55 -0.56 16 4 C -0.11 -0.02 8.21 -39.16 -0.32 -0.34 16 5 C -0.12 -0.05 8.64 -39.67 -0.34 -0.39 16 6 C -0.10 -0.10 5.28 -104.35 -0.55 -0.65 16 7 C -0.06 -0.03 2.32 36.00 0.08 0.06 16 8 O -0.53 -0.46 12.88 -35.23 -0.45 -0.91 16 9 Si 0.94 -0.01 25.48 -169.99 -4.33 -4.34 16 10 H -0.25 0.07 6.73 56.52 0.38 0.45 16 11 H -0.25 -0.39 7.11 56.52 0.40 0.01 16 12 H -0.25 -0.17 7.11 56.52 0.40 0.23 16 13 C 0.12 0.17 4.71 -83.83 -0.39 -0.22 16 14 N -0.49 -0.64 3.93 -170.85 -0.67 -1.32 16 15 C 0.03 0.03 5.40 -3.71 -0.02 0.01 16 16 C 0.06 0.06 7.01 37.21 0.26 0.32 16 17 O -0.39 -1.05 10.83 -35.23 -0.38 -1.43 16 18 C 0.06 0.04 7.01 37.20 0.26 0.30 16 19 C 0.02 0.01 5.36 -3.72 -0.02 -0.01 16 20 C -0.14 -0.18 7.91 -38.98 -0.31 -0.49 16 21 Si 1.05 -2.52 11.58 -169.99 -1.97 -4.48 16 22 C -0.45 0.66 7.82 101.05 0.79 1.45 16 23 C -0.45 0.83 8.65 101.05 0.87 1.70 16 24 C -0.45 0.69 8.65 101.05 0.87 1.56 16 25 H 0.10 -0.26 7.72 -52.48 -0.41 -0.67 16 26 H 0.09 -0.04 7.86 -52.49 -0.41 -0.45 16 27 H 0.13 -0.21 6.24 -52.49 -0.33 -0.54 16 28 H 0.13 -0.11 4.86 -52.48 -0.26 -0.37 16 29 H 0.12 0.09 7.78 -51.93 -0.40 -0.31 16 30 H 0.37 -0.80 8.70 45.56 0.40 -0.40 16 31 H 0.04 0.06 7.42 -51.93 -0.39 -0.33 16 32 H 0.09 0.09 8.14 -51.93 -0.42 -0.34 16 33 H 0.06 0.08 8.14 -51.92 -0.42 -0.34 16 34 H 0.10 -0.04 8.14 -51.93 -0.42 -0.46 16 35 H 0.06 0.03 8.14 -51.93 -0.42 -0.39 16 36 H 0.10 -0.08 8.14 -51.93 -0.42 -0.51 16 37 H 0.09 -0.01 8.14 -51.93 -0.42 -0.43 16 38 H 0.05 0.05 7.20 -51.93 -0.37 -0.33 16 39 H 0.12 0.14 6.93 -52.49 -0.36 -0.22 16 40 H 0.07 -0.13 6.46 -51.93 -0.34 -0.46 16 41 H 0.07 -0.12 7.96 -51.93 -0.41 -0.54 16 42 H 0.07 -0.05 7.96 -51.93 -0.41 -0.46 16 43 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 44 H 0.07 -0.14 7.96 -51.93 -0.41 -0.56 16 45 H 0.07 -0.13 7.96 -51.92 -0.41 -0.54 16 46 H 0.07 -0.08 7.96 -51.93 -0.41 -0.49 16 47 H 0.07 -0.12 7.96 -51.93 -0.41 -0.54 16 48 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 LS Contribution 379.28 15.07 5.72 5.72 Total: 0.00 -4.73 379.28 -8.76 -13.49 By element: Atomic # 1 Polarization: -2.52 SS G_CDS: -7.53 Total: -10.05 kcal Atomic # 6 Polarization: 2.46 SS G_CDS: 0.86 Total: 3.32 kcal Atomic # 7 Polarization: -0.64 SS G_CDS: -0.67 Total: -1.32 kcal Atomic # 8 Polarization: -1.51 SS G_CDS: -0.84 Total: -2.34 kcal Atomic # 14 Polarization: -2.52 SS G_CDS: -6.30 Total: -8.82 kcal Total LS contribution 5.72 Total: 5.72 kcal Total: -4.73 -8.76 -13.49 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_271570_14761194_12419860.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -49.285 kcal (2) G-P(sol) polarization free energy of solvation -4.730 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -54.015 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.764 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -13.494 kcal (6) G-S(sol) free energy of system = (1) + (5) -62.778 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.81 seconds