Wall clock time and date at job start Mon Mar 8 2021 10:42:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.32609 * 1 3 3 C 1.47740 * 119.99849 * 2 1 4 4 C 1.39468 * 120.16630 * 245.45659 * 3 2 1 5 5 C 1.38001 * 119.90995 * 180.29610 * 4 3 2 6 6 C 1.50697 * 119.87132 * 179.97438 * 5 4 3 7 7 O 1.42896 * 109.47085 * 299.97741 * 6 5 4 8 8 Si 1.86299 * 109.46923 * 179.97438 * 6 5 4 9 9 H 1.48494 * 109.47354 * 60.00389 * 8 6 5 10 10 H 1.48507 * 109.47157 * 179.97438 * 8 6 5 11 11 H 1.48501 * 109.47530 * 299.99883 * 8 6 5 12 12 C 1.38375 * 120.25591 * 359.95940 * 5 4 3 13 13 C 1.38245 * 120.35002 * 0.04117 * 12 5 4 14 14 C 1.38499 * 120.08042 * 359.97438 * 13 12 5 15 15 O 1.35828 * 120.12938 * 179.97438 * 14 13 12 16 16 C 1.42904 * 117.00024 * 0.02562 * 15 14 13 17 17 F 1.39896 * 109.47243 * 59.99767 * 16 15 14 18 18 F 1.39900 * 109.47419 * 180.02562 * 16 15 14 19 19 F 1.39904 * 109.47024 * 300.00189 * 16 15 14 20 20 Si 1.86801 * 120.00160 * 179.97438 * 2 1 3 21 21 C 1.86295 * 109.47160 * 185.10714 * 20 2 1 22 22 C 1.86299 * 109.46997 * 305.10754 * 20 2 1 23 23 C 1.86295 * 109.47088 * 65.10665 * 20 2 1 24 24 H 1.08004 * 120.00429 * 5.04004 * 1 2 3 25 25 H 1.08005 * 120.00187 * 185.04357 * 1 2 3 26 26 H 1.07996 * 120.04677 * 0.25730 * 4 3 2 27 27 H 1.08998 * 109.47249 * 59.98173 * 6 5 4 28 28 H 0.96689 * 114.00447 * 300.00268 * 7 6 5 29 29 H 1.08007 * 119.82239 * 180.02562 * 12 5 4 30 30 H 1.07996 * 119.95350 * 179.97438 * 13 12 5 31 31 H 1.08999 * 109.47249 * 54.93512 * 21 20 2 32 32 H 1.08998 * 109.47230 * 174.93581 * 21 20 2 33 33 H 1.09001 * 109.47328 * 294.93071 * 21 20 2 34 34 H 1.08994 * 109.47143 * 60.00107 * 22 20 2 35 35 H 1.08998 * 109.47243 * 180.02562 * 22 20 2 36 36 H 1.08999 * 109.47390 * 299.99860 * 22 20 2 37 37 H 1.09004 * 109.47150 * 59.99778 * 23 20 2 38 38 H 1.08997 * 109.47679 * 180.02562 * 23 20 2 39 39 H 1.09001 * 109.47355 * 300.00427 * 23 20 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.3261 0.0000 0.0000 3 6 2.0648 1.2795 0.0000 4 6 2.8489 1.6360 -1.0969 5 6 3.5415 2.8296 -1.0887 6 6 4.3891 3.2137 -2.2741 7 8 5.4024 2.2264 -2.4750 8 14 5.1869 4.8671 -1.9573 9 1 6.0409 4.7807 -0.7455 10 1 6.0226 5.2454 -3.1251 11 1 4.1338 5.8931 -1.7485 12 6 3.4606 3.6752 0.0036 13 6 2.6865 3.3324 1.0965 14 6 1.9857 2.1378 1.1036 15 8 1.2253 1.7998 2.1771 16 6 1.1928 2.7245 3.2661 17 9 0.6902 3.9518 2.8210 18 9 0.3692 2.2227 4.2796 19 9 2.4878 2.9039 3.7643 20 14 2.2601 -1.6177 0.0007 21 6 4.0857 -1.2807 0.1569 22 6 1.6958 -2.6599 1.4381 23 6 1.9304 -2.5259 -1.5921 24 1 -0.5401 0.9317 -0.0822 25 1 -0.5401 -0.9317 0.0822 26 1 2.9146 0.9787 -1.9512 27 1 3.7622 3.2773 -3.1635 28 1 5.9986 2.1158 -1.7219 29 1 4.0053 4.6079 0.0024 30 1 2.6282 3.9970 1.9458 31 1 4.2683 -0.6720 1.0425 32 1 4.6230 -2.2247 0.2478 33 1 4.4339 -0.7483 -0.7282 34 1 0.6278 -2.8571 1.3467 35 1 2.2411 -3.6037 1.4388 36 1 1.8887 -2.1286 2.3701 37 1 2.2605 -1.9160 -2.4331 38 1 2.4750 -3.4700 -1.5916 39 1 0.8623 -2.7230 -1.6836 RHF calculation, no. of doubly occupied orbitals= 56 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_271570_14761194_12419864.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 10:42:41 Heat of formation + Delta-G solvation = -226.354458 kcal Electronic energy + Delta-G solvation = -26037.676171 eV Core-core repulsion = 21847.364534 eV Total energy + Delta-G solvation = -4190.311637 eV No. of doubly occupied orbitals = 56 Molecular weight (most abundant/longest-lived isotopes) = 320.097 amu Computer time = 0.52 seconds Orbital eigenvalues (eV) -51.45320 -49.16348 -49.05419 -41.52612 -39.39383 -37.42777 -35.12458 -32.02973 -30.95501 -29.53202 -28.42507 -28.31231 -27.63897 -26.02582 -24.47194 -23.17667 -21.12384 -20.43564 -20.17183 -19.70244 -18.40515 -17.65538 -17.18375 -16.48825 -16.26720 -16.05418 -15.90654 -15.76062 -15.61583 -15.49913 -15.45502 -15.30539 -15.13654 -14.73775 -14.52159 -14.25669 -14.18134 -13.94240 -13.87613 -13.69864 -13.38459 -13.28918 -13.27936 -13.08606 -12.96486 -12.59282 -12.35115 -12.13662 -11.74088 -11.29325 -11.07155 -10.87980 -10.53134 -10.34668 -9.86786 -9.37637 -0.05816 0.06467 0.44504 0.99700 1.08933 1.37181 1.44448 1.69117 1.80909 1.85145 1.86460 2.07901 2.40497 2.60906 2.74514 2.96839 3.36073 3.46956 3.55499 3.69017 3.90390 4.06604 4.32877 4.47958 4.62345 4.70433 4.71156 4.74929 4.75323 4.77465 4.80246 4.83582 4.89394 4.93159 5.18566 5.33815 5.38203 5.45824 5.53528 5.56180 5.65477 5.83942 6.47538 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.110 4.110 2 C -0.376 4.376 3 C -0.030 4.030 4 C -0.054 4.054 5 C -0.132 4.132 6 C -0.077 4.077 7 O -0.536 6.536 8 Si 0.944 3.056 9 H -0.250 1.250 10 H -0.251 1.251 11 H -0.250 1.250 12 C -0.092 4.092 13 C -0.181 4.181 14 C 0.108 3.892 15 O -0.301 6.301 16 C 0.601 3.399 17 F -0.165 7.165 18 F -0.130 7.130 19 F -0.165 7.165 20 Si 1.049 2.951 21 C -0.445 4.445 22 C -0.448 4.448 23 C -0.447 4.447 24 H 0.093 0.907 25 H 0.107 0.893 26 H 0.144 0.856 27 H 0.121 0.879 28 H 0.377 0.623 29 H 0.129 0.871 30 H 0.136 0.864 31 H 0.067 0.933 32 H 0.070 0.930 33 H 0.073 0.927 34 H 0.069 0.931 35 H 0.071 0.929 36 H 0.070 0.930 37 H 0.071 0.929 38 H 0.072 0.928 39 H 0.069 0.931 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.516 -0.709 -0.983 1.317 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.146 4.146 2 C -0.417 4.417 3 C -0.031 4.031 4 C -0.072 4.072 5 C -0.133 4.133 6 C -0.188 4.188 7 O -0.341 6.341 8 Si 0.766 3.234 9 H -0.173 1.173 10 H -0.175 1.175 11 H -0.173 1.173 12 C -0.110 4.110 13 C -0.199 4.199 14 C 0.066 3.934 15 O -0.220 6.220 16 C 0.510 3.490 17 F -0.147 7.147 18 F -0.111 7.111 19 F -0.147 7.147 20 Si 1.241 2.759 21 C -0.554 4.554 22 C -0.555 4.555 23 C -0.554 4.554 24 H 0.111 0.889 25 H 0.125 0.875 26 H 0.162 0.838 27 H 0.139 0.861 28 H 0.225 0.775 29 H 0.146 0.854 30 H 0.154 0.846 31 H 0.087 0.913 32 H 0.089 0.911 33 H 0.092 0.908 34 H 0.088 0.912 35 H 0.090 0.910 36 H 0.089 0.911 37 H 0.090 0.910 38 H 0.091 0.909 39 H 0.088 0.912 Dipole moment (debyes) X Y Z Total from point charges 0.451 -0.023 -1.342 1.416 hybrid contribution -0.187 0.179 0.935 0.970 sum 0.264 0.156 -0.407 0.509 Atomic orbital electron populations 1.24218 0.95326 1.01922 0.93150 1.27841 1.00970 1.07193 1.05700 1.18306 0.99549 0.93976 0.91269 1.20978 0.93512 0.95848 0.96905 1.20288 1.00552 0.95988 0.96437 1.24931 0.92258 1.02607 0.99003 1.86519 1.43867 1.59791 1.43958 0.85760 0.80685 0.75788 0.81120 1.17342 1.17525 1.17347 1.20830 0.98332 0.99268 0.92579 1.21383 1.00831 0.96374 1.01326 1.18749 0.93756 0.94810 0.86115 1.86454 1.66472 1.44070 1.25026 1.19424 0.74862 0.75773 0.78905 1.93308 1.87584 1.44765 1.89090 1.93327 1.72167 1.87795 1.57832 1.93310 1.38447 1.94863 1.88101 0.78366 0.66475 0.63368 0.67712 1.26087 1.19424 1.05011 1.04835 1.26115 1.05925 1.09333 1.14162 1.26116 1.05043 1.08224 1.16051 0.88879 0.87512 0.83789 0.86109 0.77549 0.85393 0.84605 0.91337 0.91085 0.90771 0.91219 0.90970 0.91082 0.90992 0.90909 0.91195 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 0.06 13.29 28.83 0.38 0.44 16 2 C -0.38 0.13 3.83 -37.60 -0.14 -0.01 16 3 C -0.03 -0.02 4.83 -104.88 -0.51 -0.53 16 4 C -0.05 0.01 8.91 -39.21 -0.35 -0.34 16 5 C -0.13 0.04 5.39 -104.66 -0.56 -0.52 16 6 C -0.08 0.11 2.82 36.00 0.10 0.21 16 7 O -0.54 0.48 12.76 -35.23 -0.45 0.03 16 8 Si 0.94 -1.08 25.06 -169.99 -4.26 -5.34 16 9 H -0.25 0.23 7.11 56.52 0.40 0.63 16 10 H -0.25 -0.09 7.11 56.52 0.40 0.31 16 11 H -0.25 0.13 7.11 56.52 0.40 0.53 16 12 C -0.09 -0.01 8.66 -39.53 -0.34 -0.36 16 13 C -0.18 -0.19 8.25 -39.48 -0.33 -0.52 16 14 C 0.11 0.18 6.45 -38.81 -0.25 -0.07 16 15 O -0.30 -0.57 9.56 -19.20 -0.18 -0.76 16 16 C 0.60 0.77 3.42 101.05 0.35 1.12 16 17 F -0.17 -0.22 15.57 2.25 0.04 -0.18 16 18 F -0.13 -0.19 17.53 2.25 0.04 -0.15 16 19 F -0.17 -0.20 15.56 2.25 0.04 -0.17 16 20 Si 1.05 -2.15 12.13 -169.99 -2.06 -4.22 16 21 C -0.45 0.54 8.55 101.05 0.86 1.40 16 22 C -0.45 0.49 8.65 101.05 0.87 1.36 16 23 C -0.45 0.76 8.65 101.05 0.87 1.63 16 24 H 0.09 0.00 8.05 -52.48 -0.42 -0.42 16 25 H 0.11 -0.24 7.73 -52.48 -0.41 -0.65 16 26 H 0.14 -0.21 8.06 -52.49 -0.42 -0.63 16 27 H 0.12 -0.27 7.96 -51.93 -0.41 -0.69 16 28 H 0.38 -1.44 8.70 45.56 0.40 -1.05 16 29 H 0.13 -0.15 4.85 -52.48 -0.25 -0.41 16 30 H 0.14 0.05 5.09 -52.49 -0.27 -0.22 16 31 H 0.07 -0.03 7.96 -51.93 -0.41 -0.45 16 32 H 0.07 -0.10 7.96 -51.93 -0.41 -0.52 16 33 H 0.07 -0.10 7.90 -51.93 -0.41 -0.51 16 34 H 0.07 -0.09 7.96 -51.93 -0.41 -0.51 16 35 H 0.07 -0.10 7.96 -51.93 -0.41 -0.51 16 36 H 0.07 -0.03 7.96 -51.93 -0.41 -0.44 16 37 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 38 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 39 H 0.07 -0.12 7.96 -51.93 -0.41 -0.54 16 LS Contribution 343.26 15.07 5.17 5.17 Total: 0.00 -3.91 343.26 -5.02 -8.93 By element: Atomic # 1 Polarization: -2.82 SS G_CDS: -4.30 Total: -7.13 kcal Atomic # 6 Polarization: 2.86 SS G_CDS: 0.96 Total: 3.82 kcal Atomic # 8 Polarization: -0.10 SS G_CDS: -0.63 Total: -0.73 kcal Atomic # 9 Polarization: -0.62 SS G_CDS: 0.11 Total: -0.51 kcal Atomic # 14 Polarization: -3.23 SS G_CDS: -6.32 Total: -9.56 kcal Total LS contribution 5.17 Total: 5.17 kcal Total: -3.91 -5.02 -8.93 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_271570_14761194_12419864.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -217.428 kcal (2) G-P(sol) polarization free energy of solvation -3.910 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -221.338 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.016 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -8.927 kcal (6) G-S(sol) free energy of system = (1) + (5) -226.354 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.52 seconds