Wall clock time and date at job start Mon Mar 8 2021 10:59:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.32585 * 1 3 3 C 1.47796 * 119.99708 * 2 1 4 4 C 1.39532 * 120.11465 * 243.99955 * 3 2 1 5 5 C 1.37944 * 119.88016 * 179.97438 * 4 3 2 6 6 C 1.38552 * 120.11854 * 0.02562 * 5 4 3 7 7 F 1.35101 * 119.88244 * 179.97438 * 6 5 4 8 8 C 1.38598 * 120.23471 * 359.74708 * 6 5 4 9 9 C 1.37911 * 120.11029 * 0.50788 * 8 6 5 10 10 C 1.50705 * 120.05497 * 179.76840 * 9 8 6 11 11 O 1.42902 * 109.46888 * 255.55068 * 10 9 8 12 12 Si 1.86305 * 109.47067 * 15.55075 * 10 9 8 13 13 H 1.48500 * 109.47126 * 59.99691 * 12 10 9 14 14 H 1.48499 * 109.47053 * 299.99743 * 12 10 9 15 15 H 1.48495 * 109.46872 * 179.97438 * 12 10 9 16 16 Si 1.86800 * 119.99792 * 180.02562 * 2 1 3 17 17 C 1.86309 * 109.46765 * 239.99923 * 16 2 1 18 18 C 1.86292 * 109.47475 * 359.97438 * 16 2 1 19 19 C 1.86298 * 109.46938 * 120.00370 * 16 2 1 20 20 H 1.08000 * 119.99856 * 175.13296 * 1 2 3 21 21 H 1.08000 * 119.99883 * 355.13437 * 1 2 3 22 22 H 1.08000 * 120.05713 * 0.02562 * 4 3 2 23 23 H 1.08006 * 119.94170 * 180.02562 * 5 4 3 24 24 H 1.08002 * 119.94661 * 180.27721 * 8 6 5 25 25 H 1.08996 * 109.46934 * 135.54725 * 10 9 8 26 26 H 0.96698 * 113.99496 * 304.70261 * 11 10 9 27 27 H 1.08998 * 109.46941 * 60.00449 * 17 16 2 28 28 H 1.09004 * 109.46640 * 180.02562 * 17 16 2 29 29 H 1.09003 * 109.46966 * 300.00026 * 17 16 2 30 30 H 1.08998 * 109.47449 * 59.99835 * 18 16 2 31 31 H 1.08999 * 109.47333 * 180.02562 * 18 16 2 32 32 H 1.09007 * 109.47178 * 300.00242 * 18 16 2 33 33 H 1.08999 * 109.47634 * 59.99977 * 19 16 2 34 34 H 1.08999 * 109.46843 * 179.97438 * 19 16 2 35 35 H 1.09003 * 109.47013 * 299.99134 * 19 16 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.3258 0.0000 0.0000 3 6 2.0648 1.2800 0.0000 4 6 2.8730 1.6218 -1.0848 5 6 3.5601 2.8179 -1.0800 6 6 3.4492 3.6790 -0.0003 7 9 4.1246 4.8491 -0.0003 8 6 2.6440 3.3465 1.0777 9 6 1.9569 2.1508 1.0853 10 6 1.0859 1.7882 2.2604 11 8 1.7467 0.8028 3.0570 12 14 0.7679 3.3079 3.2901 13 1 0.0814 4.3319 2.4623 14 1 2.0594 3.8526 3.7807 15 1 -0.0908 2.9507 4.4477 16 14 2.2598 -1.6178 -0.0007 17 6 3.3309 -1.7171 1.5205 18 6 1.0492 -3.0338 -0.0006 19 6 3.3309 -1.7157 -1.5218 20 1 -0.5400 -0.9319 -0.0794 21 1 -0.5400 0.9319 0.0793 22 1 2.9598 0.9514 -1.9271 23 1 4.1857 3.0836 -1.9194 24 1 2.5574 4.0233 1.9150 25 1 0.1380 1.3884 1.9004 26 1 2.0082 0.0115 2.5666 27 1 2.7042 -1.6598 2.4104 28 1 3.8762 -2.6609 1.5198 29 1 4.0392 -0.8885 1.5208 30 1 0.4222 -2.9759 -0.8902 31 1 1.5942 -3.9777 -0.0005 32 1 0.4229 -2.9762 0.8897 33 1 4.0393 -0.8873 -1.5215 34 1 3.8762 -2.6595 -1.5220 35 1 2.7042 -1.6577 -2.4118 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_271570_14761194_13286464.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 10:59:07 Heat of formation + Delta-G solvation = -84.872644 kcal Electronic energy + Delta-G solvation = -17263.376651 eV Core-core repulsion = 14492.327888 eV Total energy + Delta-G solvation = -2771.048763 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 254.101 amu Computer time = 0.34 seconds Orbital eigenvalues (eV) -49.80779 -40.73151 -37.48781 -34.87481 -32.82954 -30.41861 -29.64416 -28.60635 -28.41215 -27.03035 -24.07304 -22.86007 -20.81505 -18.83380 -18.03859 -17.29236 -17.23357 -16.51713 -15.98917 -15.66536 -15.45588 -15.00322 -14.64143 -14.29316 -14.11622 -14.08757 -14.02036 -13.86657 -13.40321 -13.33049 -13.23482 -13.19072 -12.79182 -12.76667 -12.21367 -11.78855 -11.57265 -11.32662 -11.16117 -11.01317 -10.86208 -10.36643 -10.10426 -9.31905 -0.05674 0.10828 0.84076 1.17883 1.49710 1.54707 1.57144 1.73450 1.92958 1.96773 2.38333 2.55794 3.19701 3.52235 3.67229 3.73282 3.86836 4.08613 4.21819 4.42802 4.55272 4.59862 4.60328 4.64815 4.65340 4.66345 4.67852 4.74201 4.80808 5.03063 5.09462 5.29355 5.31786 5.36715 5.44277 5.45199 5.55525 5.84672 6.50207 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.120 4.120 2 C -0.385 4.385 3 C -0.032 4.032 4 C -0.087 4.087 5 C -0.144 4.144 6 C 0.100 3.900 7 F -0.137 7.137 8 C -0.153 4.153 9 C -0.086 4.086 10 C -0.095 4.095 11 O -0.535 6.535 12 Si 1.006 2.994 13 H -0.247 1.247 14 H -0.250 1.250 15 H -0.252 1.252 16 Si 1.048 2.952 17 C -0.456 4.456 18 C -0.451 4.451 19 C -0.450 4.450 20 H 0.111 0.889 21 H 0.097 0.903 22 H 0.140 0.860 23 H 0.139 0.861 24 H 0.137 0.863 25 H 0.082 0.918 26 H 0.364 0.636 27 H 0.072 0.928 28 H 0.077 0.923 29 H 0.074 0.926 30 H 0.071 0.929 31 H 0.074 0.926 32 H 0.072 0.928 33 H 0.072 0.928 34 H 0.072 0.928 35 H 0.071 0.929 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.547 -3.206 -1.938 4.054 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.156 4.156 2 C -0.426 4.426 3 C -0.032 4.032 4 C -0.105 4.105 5 C -0.163 4.163 6 C 0.080 3.920 7 F -0.116 7.116 8 C -0.171 4.171 9 C -0.087 4.087 10 C -0.203 4.203 11 O -0.343 6.343 12 Si 0.825 3.175 13 H -0.170 1.170 14 H -0.173 1.173 15 H -0.176 1.176 16 Si 1.240 2.760 17 C -0.563 4.563 18 C -0.559 4.559 19 C -0.558 4.558 20 H 0.129 0.871 21 H 0.115 0.885 22 H 0.158 0.842 23 H 0.157 0.843 24 H 0.155 0.845 25 H 0.100 0.900 26 H 0.215 0.785 27 H 0.091 0.909 28 H 0.096 0.904 29 H 0.093 0.907 30 H 0.090 0.910 31 H 0.093 0.907 32 H 0.091 0.909 33 H 0.091 0.909 34 H 0.091 0.909 35 H 0.090 0.910 Dipole moment (debyes) X Y Z Total from point charges -1.809 -1.932 -0.984 2.823 hybrid contribution 0.331 -0.445 -0.893 1.051 sum -1.477 -2.376 -1.878 3.370 Atomic orbital electron populations 1.24410 0.95392 1.02355 0.93436 1.27981 1.01125 1.07910 1.05569 1.18841 0.97202 0.93939 0.93261 1.21161 0.95240 0.95999 0.98104 1.21166 1.02060 0.94768 0.98285 1.17661 0.95125 0.83177 0.95999 1.91528 1.78040 1.45288 1.96714 1.21054 0.98927 0.98342 0.98818 1.20167 0.98531 0.93636 0.96345 1.25443 0.96334 1.02587 0.95935 1.86756 1.79444 1.30464 1.37621 0.84562 0.80820 0.73493 0.78615 1.17027 1.17337 1.17580 0.78400 0.66289 0.63183 0.68171 1.26209 1.10104 1.05274 1.14720 1.26154 1.11336 1.13693 1.04692 1.26155 1.09766 1.04836 1.14996 0.87054 0.88487 0.84178 0.84271 0.84546 0.90021 0.78533 0.90881 0.90415 0.90707 0.90975 0.90684 0.90920 0.90919 0.90870 0.90988 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.29 12.04 28.83 0.35 0.63 16 2 C -0.39 0.75 2.88 -37.58 -0.11 0.64 16 3 C -0.03 0.00 4.90 -105.01 -0.51 -0.51 16 4 C -0.09 0.03 9.13 -39.21 -0.36 -0.33 16 5 C -0.14 -0.08 10.01 -39.57 -0.40 -0.48 16 6 C 0.10 0.23 7.30 -39.33 -0.29 -0.06 16 7 F -0.14 -0.48 17.26 2.25 0.04 -0.44 16 8 C -0.15 -0.32 8.63 -39.57 -0.34 -0.66 16 9 C -0.09 -0.10 5.24 -104.25 -0.55 -0.65 16 10 C -0.09 -0.07 2.17 36.01 0.08 0.01 16 11 O -0.53 -0.84 12.68 -35.23 -0.45 -1.29 16 12 Si 1.01 0.93 25.77 -169.99 -4.38 -3.45 16 13 H -0.25 -0.16 7.11 56.52 0.40 0.25 16 14 H -0.25 -0.45 6.72 56.52 0.38 -0.07 16 15 H -0.25 -0.41 7.11 56.52 0.40 -0.01 16 16 Si 1.05 -3.71 11.77 -169.99 -2.00 -5.71 16 17 C -0.46 1.07 7.73 101.05 0.78 1.85 16 18 C -0.45 1.39 7.88 101.05 0.80 2.18 16 19 C -0.45 1.21 8.11 101.05 0.82 2.03 16 20 H 0.11 -0.44 7.07 -52.49 -0.37 -0.81 16 21 H 0.10 -0.21 7.32 -52.49 -0.38 -0.60 16 22 H 0.14 -0.33 6.85 -52.49 -0.36 -0.69 16 23 H 0.14 -0.16 8.06 -52.48 -0.42 -0.58 16 24 H 0.14 0.20 4.89 -52.49 -0.26 -0.06 16 25 H 0.08 -0.09 5.45 -51.93 -0.28 -0.37 16 26 H 0.36 -0.20 4.71 45.56 0.21 0.01 16 27 H 0.07 -0.19 6.43 -51.93 -0.33 -0.52 16 28 H 0.08 -0.20 7.96 -51.93 -0.41 -0.61 16 29 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 30 H 0.07 -0.23 7.96 -51.93 -0.41 -0.64 16 31 H 0.07 -0.22 7.96 -51.93 -0.41 -0.63 16 32 H 0.07 -0.23 7.96 -51.92 -0.41 -0.64 16 33 H 0.07 -0.18 7.09 -51.93 -0.37 -0.55 16 34 H 0.07 -0.19 7.96 -51.93 -0.41 -0.61 16 35 H 0.07 -0.20 7.96 -51.93 -0.41 -0.62 16 LS Contribution 288.03 15.07 4.34 4.34 Total: 0.00 -3.71 288.03 -6.46 -10.17 By element: Atomic # 1 Polarization: -4.00 SS G_CDS: -4.28 Total: -8.28 kcal Atomic # 6 Polarization: 4.39 SS G_CDS: 0.27 Total: 4.66 kcal Atomic # 8 Polarization: -0.84 SS G_CDS: -0.45 Total: -1.29 kcal Atomic # 9 Polarization: -0.48 SS G_CDS: 0.04 Total: -0.44 kcal Atomic # 14 Polarization: -2.78 SS G_CDS: -6.38 Total: -9.16 kcal Total LS contribution 4.34 Total: 4.34 kcal Total: -3.71 -6.46 -10.17 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_271570_14761194_13286464.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -74.703 kcal (2) G-P(sol) polarization free energy of solvation -3.715 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -78.417 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.456 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -10.170 kcal (6) G-S(sol) free energy of system = (1) + (5) -84.873 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.34 seconds