Wall clock time and date at job start Mon Mar 8 2021 11:00:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.32572 * 1 3 3 C 1.47794 * 120.00036 * 2 1 4 4 C 1.39508 * 120.14619 * 114.46016 * 3 2 1 5 5 C 1.38000 * 119.86608 * 180.32043 * 4 3 2 6 6 C 1.50695 * 119.91402 * 179.97438 * 5 4 3 7 7 O 1.42904 * 109.46890 * 299.97457 * 6 5 4 8 8 Si 1.86299 * 109.47369 * 179.97438 * 6 5 4 9 9 H 1.48497 * 109.47113 * 299.99902 * 8 6 5 10 10 H 1.48511 * 109.47095 * 59.99604 * 8 6 5 11 11 H 1.48495 * 109.47316 * 179.97438 * 8 6 5 12 12 C 1.38336 * 120.16764 * 359.93072 * 5 4 3 13 13 C 1.38326 * 120.30280 * 0.04757 * 12 5 4 14 14 C 1.38079 * 120.13108 * 0.02562 * 13 12 5 15 15 Cl 1.73608 * 120.08840 * 179.97438 * 14 13 12 16 16 Si 1.86798 * 120.00092 * 180.02562 * 2 1 3 17 17 C 1.86303 * 109.47222 * 275.09513 * 16 2 1 18 18 C 1.86302 * 109.47183 * 35.09435 * 16 2 1 19 19 C 1.86301 * 109.47246 * 155.09635 * 16 2 1 20 20 H 1.07997 * 119.99839 * 184.93355 * 1 2 3 21 21 H 1.07998 * 119.99886 * 4.93954 * 1 2 3 22 22 H 1.08000 * 120.06549 * 0.27650 * 4 3 2 23 23 H 1.09001 * 109.47339 * 59.97323 * 6 5 4 24 24 H 0.96701 * 113.99901 * 179.97438 * 7 6 5 25 25 H 1.08005 * 119.84163 * 180.02562 * 12 5 4 26 26 H 1.08006 * 119.93511 * 179.97438 * 13 12 5 27 27 H 1.09004 * 109.46830 * 59.99952 * 17 16 2 28 28 H 1.09001 * 109.47579 * 179.97438 * 17 16 2 29 29 H 1.09001 * 109.47080 * 300.00401 * 17 16 2 30 30 H 1.08994 * 109.46996 * 60.00229 * 18 16 2 31 31 H 1.09001 * 109.47089 * 180.02562 * 18 16 2 32 32 H 1.09004 * 109.47262 * 300.00288 * 18 16 2 33 33 H 1.08999 * 109.47081 * 55.11782 * 19 16 2 34 34 H 1.09005 * 109.46910 * 175.12066 * 19 16 2 35 35 H 1.08997 * 109.46861 * 295.11242 * 19 16 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.3257 0.0000 0.0000 3 6 2.0647 1.2799 0.0000 4 6 2.8476 1.6369 1.0981 5 6 3.5299 2.8364 1.0948 6 6 4.3754 3.2234 2.2806 7 8 3.5542 3.2958 3.4478 8 14 5.1594 4.8844 1.9688 9 1 6.0128 4.8091 0.7559 10 1 4.0976 5.9025 1.7646 11 1 5.9921 5.2660 3.1376 12 6 3.4403 3.6841 0.0052 13 6 2.6665 3.3369 -1.0875 14 6 1.9773 2.1404 -1.0967 15 17 1.0059 1.7060 -2.4684 16 14 2.2597 -1.6177 -0.0007 17 6 2.4352 -2.2343 1.7485 18 6 1.3257 -2.8737 -1.0111 19 6 3.9499 -1.3586 -0.7402 20 1 -0.5400 -0.9318 0.0804 21 1 -0.5400 0.9318 -0.0805 22 1 2.9190 0.9762 1.9494 23 1 5.1548 2.4762 2.4305 24 1 4.0334 3.5402 4.2514 25 1 3.9769 4.6215 0.0080 26 1 2.6004 4.0034 -1.9348 27 1 1.4462 -2.3859 2.1812 28 1 2.9798 -3.1785 1.7481 29 1 2.9816 -1.4995 2.3397 30 1 1.2231 -2.5130 -2.0345 31 1 1.8705 -3.8178 -1.0112 32 1 0.3367 -3.0253 -0.5785 33 1 4.4638 -0.5622 -0.2020 34 1 4.5260 -2.2807 -0.6619 35 1 3.8488 -1.0816 -1.7895 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_271570_14761194_13286578.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 11:00:25 Heat of formation + Delta-G solvation = -35.693673 kcal Electronic energy + Delta-G solvation = -16657.899121 eV Core-core repulsion = 13998.637101 eV Total energy + Delta-G solvation = -2659.262019 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 270.071 amu Computer time = 0.39 seconds Orbital eigenvalues (eV) -40.66670 -37.95218 -37.17225 -35.05784 -32.36581 -30.85184 -29.41546 -28.28197 -28.22017 -26.64838 -24.29052 -22.78624 -20.17737 -18.47615 -18.10494 -17.04453 -16.59394 -15.83672 -15.65260 -15.04938 -14.70536 -14.54348 -14.09232 -14.02538 -13.88819 -13.77666 -13.61977 -13.24523 -13.16157 -13.10325 -12.95312 -12.76412 -12.57104 -12.26832 -12.10484 -11.88550 -11.72014 -11.24874 -10.93393 -10.78009 -10.35581 -10.18823 -9.77932 -9.41949 -0.04412 0.17798 1.06885 1.14590 1.16855 1.44305 1.49434 1.81857 1.89838 1.99392 2.22565 2.49065 2.71818 3.41141 3.68562 3.81531 3.88395 4.16655 4.35484 4.39684 4.64456 4.77523 4.82325 4.84268 4.84608 4.86106 4.89994 4.90686 4.94044 5.03611 5.16553 5.28210 5.45896 5.56846 5.63973 5.68059 5.70508 5.83912 6.81307 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.116 4.116 2 C -0.393 4.393 3 C -0.024 4.024 4 C -0.088 4.088 5 C -0.076 4.076 6 C -0.081 4.081 7 O -0.561 6.561 8 Si 0.971 3.029 9 H -0.256 1.256 10 H -0.272 1.272 11 H -0.252 1.252 12 C -0.133 4.133 13 C -0.108 4.108 14 C -0.051 4.051 15 Cl -0.070 7.070 16 Si 1.100 2.900 17 C -0.453 4.453 18 C -0.457 4.457 19 C -0.459 4.459 20 H 0.126 0.874 21 H 0.082 0.918 22 H 0.149 0.851 23 H 0.103 0.897 24 H 0.399 0.601 25 H 0.136 0.864 26 H 0.147 0.853 27 H 0.072 0.928 28 H 0.075 0.925 29 H 0.071 0.929 30 H 0.065 0.935 31 H 0.076 0.924 32 H 0.075 0.925 33 H 0.066 0.934 34 H 0.076 0.924 35 H 0.061 0.939 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.413 -1.493 2.345 3.682 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.152 4.152 2 C -0.431 4.431 3 C -0.025 4.025 4 C -0.106 4.106 5 C -0.076 4.076 6 C -0.192 4.192 7 O -0.370 6.370 8 Si 0.796 3.204 9 H -0.180 1.180 10 H -0.197 1.197 11 H -0.176 1.176 12 C -0.151 4.151 13 C -0.126 4.126 14 C -0.078 4.078 15 Cl -0.041 7.041 16 Si 1.288 2.712 17 C -0.561 4.561 18 C -0.565 4.565 19 C -0.565 4.565 20 H 0.144 0.856 21 H 0.100 0.900 22 H 0.166 0.834 23 H 0.121 0.879 24 H 0.250 0.750 25 H 0.154 0.846 26 H 0.165 0.835 27 H 0.091 0.909 28 H 0.094 0.906 29 H 0.090 0.910 30 H 0.084 0.916 31 H 0.095 0.905 32 H 0.094 0.906 33 H 0.085 0.915 34 H 0.095 0.905 35 H 0.080 0.920 Dipole moment (debyes) X Y Z Total from point charges 2.215 -0.808 1.645 2.875 hybrid contribution -0.095 0.202 0.044 0.228 sum 2.120 -0.606 1.689 2.778 Atomic orbital electron populations 1.24377 0.95409 1.02381 0.93076 1.28281 1.01291 1.07847 1.05726 1.19103 0.96998 0.94158 0.92204 1.21183 0.95424 0.96668 0.97304 1.19583 0.98491 0.94822 0.94704 1.24749 0.96628 1.11560 0.86223 1.86462 1.38604 1.93295 1.18653 0.85387 0.78343 0.75795 0.80891 1.17985 1.19739 1.17649 1.21121 1.00263 0.99866 0.93874 1.21106 0.96424 0.95468 0.99640 1.21275 0.99148 0.96638 0.90695 1.98363 1.69976 1.93095 1.42634 0.77596 0.64730 0.61701 0.67147 1.26170 1.04990 1.06450 1.18449 1.26232 1.09014 1.11983 1.09245 1.26238 1.18650 1.04878 1.06773 0.85596 0.90003 0.83379 0.87898 0.75002 0.84614 0.83524 0.90897 0.90577 0.91009 0.91570 0.90512 0.90617 0.91464 0.90531 0.91985 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.05 12.67 66.67 0.84 0.79 16 2 C -0.39 -0.30 3.57 23.65 0.08 -0.22 16 3 C -0.02 -0.09 4.90 -20.10 -0.10 -0.19 16 4 C -0.09 -0.26 8.98 22.52 0.20 -0.06 16 5 C -0.08 -0.21 5.42 -19.90 -0.11 -0.32 16 6 C -0.08 0.15 2.81 71.23 0.20 0.35 16 7 O -0.56 0.58 12.74 -148.98 -1.90 -1.32 16 8 Si 0.97 -1.67 25.06 68.60 1.72 0.05 16 9 H -0.26 0.17 7.11 99.48 0.71 0.88 16 10 H -0.27 -0.66 7.11 99.48 0.71 0.05 16 11 H -0.25 0.57 7.11 99.48 0.71 1.28 16 12 C -0.13 -0.43 8.67 22.31 0.19 -0.23 16 13 C -0.11 -0.43 9.82 22.25 0.22 -0.21 16 14 C -0.05 -0.27 6.32 22.58 0.14 -0.13 16 15 Cl -0.07 -0.36 27.31 -2.72 -0.07 -0.44 16 16 Si 1.10 -3.93 12.09 68.60 0.83 -3.10 16 17 C -0.45 1.61 8.65 113.37 0.98 2.59 16 18 C -0.46 1.24 8.65 113.37 0.98 2.22 16 19 C -0.46 0.47 8.65 113.37 0.98 1.45 16 20 H 0.13 -0.51 7.59 -2.91 -0.02 -0.53 16 21 H 0.08 0.23 8.05 -2.91 -0.02 0.20 16 22 H 0.15 -0.01 8.06 -2.91 -0.02 -0.03 16 23 H 0.10 -0.68 7.96 -2.39 -0.02 -0.70 16 24 H 0.40 -4.03 8.74 -74.06 -0.65 -4.67 16 25 H 0.14 0.04 4.86 -2.91 -0.01 0.03 16 26 H 0.15 0.11 8.06 -2.91 -0.02 0.08 16 27 H 0.07 -0.27 7.96 -2.39 -0.02 -0.29 16 28 H 0.08 -0.32 7.96 -2.39 -0.02 -0.34 16 29 H 0.07 -0.25 7.96 -2.39 -0.02 -0.27 16 30 H 0.07 -0.09 7.96 -2.39 -0.02 -0.10 16 31 H 0.08 -0.26 7.96 -2.39 -0.02 -0.28 16 32 H 0.07 -0.28 7.83 -2.39 -0.02 -0.30 16 33 H 0.07 -0.03 7.96 -2.39 -0.02 -0.04 16 34 H 0.08 -0.18 7.96 -2.38 -0.02 -0.20 16 35 H 0.06 0.04 7.96 -2.39 -0.02 0.03 16 Total: 0.00 -10.34 312.49 6.38 -3.96 By element: Atomic # 1 Polarization: -6.39 SS G_CDS: 1.18 Total: -5.21 kcal Atomic # 6 Polarization: 1.43 SS G_CDS: 4.62 Total: 6.05 kcal Atomic # 8 Polarization: 0.58 SS G_CDS: -1.90 Total: -1.32 kcal Atomic # 14 Polarization: -5.60 SS G_CDS: 2.55 Total: -3.05 kcal Atomic # 17 Polarization: -0.36 SS G_CDS: -0.07 Total: -0.44 kcal Total: -10.34 6.38 -3.96 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_271570_14761194_13286578.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -31.731 kcal (2) G-P(sol) polarization free energy of solvation -10.338 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -42.069 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 6.376 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -3.963 kcal (6) G-S(sol) free energy of system = (1) + (5) -35.694 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.39 seconds