Wall clock time and date at job start Mon Mar 8 2021 11:01:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.32573 * 1 3 3 C 1.47798 * 119.99915 * 2 1 4 4 C 1.39504 * 120.15049 * 245.52187 * 3 2 1 5 5 C 1.37997 * 119.87268 * 179.69890 * 4 3 2 6 6 C 1.38336 * 120.16415 * 0.57767 * 5 4 3 7 7 C 1.50700 * 119.84783 * 179.69950 * 6 5 4 8 8 O 1.42900 * 109.46924 * 120.02036 * 7 6 5 9 9 Si 1.86304 * 109.47034 * 0.02562 * 7 6 5 10 10 H 1.48497 * 109.47119 * 60.00196 * 9 7 6 11 11 H 1.48499 * 109.46827 * 179.97438 * 9 7 6 12 12 H 1.48500 * 109.47096 * 300.00092 * 9 7 6 13 13 C 1.38335 * 120.30047 * 359.71891 * 6 5 4 14 14 C 1.38078 * 120.13356 * 359.97438 * 13 6 5 15 15 Cl 1.73594 * 120.09019 * 179.97438 * 14 13 6 16 16 Si 1.86798 * 120.00342 * 180.27422 * 2 1 3 17 17 C 1.86303 * 109.46894 * 84.93264 * 16 2 1 18 18 C 1.86293 * 109.47449 * 204.93326 * 16 2 1 19 19 C 1.86297 * 109.47004 * 324.93682 * 16 2 1 20 20 H 1.07998 * 119.99779 * 355.42425 * 1 2 3 21 21 H 1.08002 * 119.99745 * 175.42689 * 1 2 3 22 22 H 1.08002 * 120.06550 * 359.97438 * 4 3 2 23 23 H 1.07998 * 119.91891 * 180.29969 * 5 4 3 24 24 H 1.09001 * 109.46898 * 240.02175 * 7 6 5 25 25 H 0.96694 * 114.00015 * 299.99709 * 8 7 6 26 26 H 1.08000 * 119.93511 * 180.02562 * 13 6 5 27 27 H 1.09007 * 109.47087 * 60.00495 * 17 16 2 28 28 H 1.09006 * 109.47254 * 180.02562 * 17 16 2 29 29 H 1.08998 * 109.47558 * 300.00173 * 17 16 2 30 30 H 1.09001 * 109.47063 * 54.65998 * 18 16 2 31 31 H 1.09005 * 109.47045 * 174.65500 * 18 16 2 32 32 H 1.09001 * 109.47227 * 294.65708 * 18 16 2 33 33 H 1.08998 * 109.47163 * 60.00001 * 19 16 2 34 34 H 1.09006 * 109.46982 * 179.97438 * 19 16 2 35 35 H 1.08993 * 109.47142 * 299.99528 * 19 16 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.3257 0.0000 0.0000 3 6 2.0647 1.2800 0.0000 4 6 2.8479 1.6369 -1.0979 5 6 3.5305 2.8362 -1.0944 6 6 3.4493 3.6791 -0.0005 7 6 4.2031 4.9840 -0.0015 8 8 3.2808 6.0669 0.1348 9 14 5.1361 5.1610 -1.6043 10 1 4.1786 5.1416 -2.7392 11 1 5.8784 6.4471 -1.6055 12 1 6.0945 4.0355 -1.7461 13 6 2.6797 3.3293 1.0945 14 6 1.9865 2.1351 1.1016 15 17 1.0216 1.6970 2.4765 16 14 2.2598 -1.6176 -0.0077 17 6 2.4360 -2.2246 -1.7603 18 6 3.9496 -1.3626 0.7339 19 6 1.3253 -2.8791 0.9953 20 1 -0.5400 0.9323 0.0746 21 1 -0.5400 -0.9324 -0.0746 22 1 2.9164 0.9779 -1.9508 23 1 4.1332 3.1155 -1.9460 24 1 4.9059 4.9982 0.8316 25 1 2.6245 6.1160 -0.5736 26 1 2.6202 3.9919 1.9452 27 1 2.9828 -1.4865 -2.3472 28 1 2.9806 -3.1688 -1.7649 29 1 1.4473 -2.3738 -2.1943 30 1 3.8485 -0.9185 1.7242 31 1 4.4588 -2.3229 0.8167 32 1 4.5303 -0.6974 0.0948 33 1 0.3367 -3.0284 0.5613 34 1 1.8702 -3.8232 0.9904 35 1 1.2222 -2.5241 2.0206 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_271570_14761194_13286580.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 11:01:56 Heat of formation + Delta-G solvation = -36.870079 kcal Electronic energy + Delta-G solvation = -16560.467041 eV Core-core repulsion = 13901.154009 eV Total energy + Delta-G solvation = -2659.313032 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 270.071 amu Computer time = 0.42 seconds Orbital eigenvalues (eV) -40.71069 -38.00560 -37.23020 -34.94439 -31.89851 -31.26411 -29.42062 -28.34184 -28.28232 -26.65311 -23.87695 -22.98678 -20.66043 -18.51464 -17.45584 -16.89955 -16.39838 -16.09532 -15.66852 -15.26141 -14.90107 -14.65694 -14.09443 -13.98529 -13.87606 -13.79552 -13.61076 -13.18399 -13.15862 -13.02584 -12.96458 -12.70547 -12.49083 -12.28936 -12.07006 -12.05448 -11.61866 -11.20447 -10.91370 -10.79028 -10.47294 -10.17710 -9.87880 -9.38374 -0.03810 0.18119 1.03937 1.10753 1.25235 1.45917 1.51109 1.81357 1.91411 1.97951 2.22087 2.51286 2.72441 3.46478 3.63470 3.80601 3.88450 4.09259 4.37544 4.47155 4.66006 4.77537 4.80753 4.83080 4.84416 4.85274 4.89529 4.91109 4.93348 5.03526 5.22598 5.28272 5.43768 5.56243 5.63382 5.67703 5.70271 5.84167 6.66474 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.114 4.114 2 C -0.393 4.393 3 C -0.021 4.021 4 C -0.107 4.107 5 C -0.120 4.120 6 C -0.120 4.120 7 C -0.082 4.082 8 O -0.553 6.553 9 Si 0.983 3.017 10 H -0.248 1.248 11 H -0.276 1.276 12 H -0.251 1.251 13 C -0.090 4.090 14 C -0.052 4.052 15 Cl -0.073 7.073 16 Si 1.103 2.897 17 C -0.453 4.453 18 C -0.461 4.461 19 C -0.460 4.460 20 H 0.083 0.917 21 H 0.125 0.875 22 H 0.158 0.842 23 H 0.142 0.858 24 H 0.123 0.877 25 H 0.389 0.611 26 H 0.134 0.866 27 H 0.074 0.926 28 H 0.074 0.926 29 H 0.073 0.927 30 H 0.058 0.942 31 H 0.073 0.927 32 H 0.068 0.932 33 H 0.075 0.925 34 H 0.075 0.925 35 H 0.064 0.936 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.457 -2.291 -3.296 4.040 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C -0.432 4.432 3 C -0.022 4.022 4 C -0.125 4.125 5 C -0.138 4.138 6 C -0.121 4.121 7 C -0.192 4.192 8 O -0.360 6.360 9 Si 0.807 3.193 10 H -0.171 1.171 11 H -0.202 1.202 12 H -0.174 1.174 13 C -0.108 4.108 14 C -0.078 4.078 15 Cl -0.044 7.044 16 Si 1.290 2.710 17 C -0.560 4.560 18 C -0.567 4.567 19 C -0.567 4.567 20 H 0.101 0.899 21 H 0.143 0.857 22 H 0.176 0.824 23 H 0.159 0.841 24 H 0.141 0.859 25 H 0.238 0.762 26 H 0.152 0.848 27 H 0.093 0.907 28 H 0.093 0.907 29 H 0.092 0.908 30 H 0.077 0.923 31 H 0.093 0.907 32 H 0.087 0.913 33 H 0.094 0.906 34 H 0.094 0.906 35 H 0.083 0.917 Dipole moment (debyes) X Y Z Total from point charges 1.126 -2.057 -3.403 4.133 hybrid contribution -0.786 0.165 0.489 0.940 sum 0.340 -1.892 -2.915 3.491 Atomic orbital electron populations 1.24378 0.95382 1.02412 0.92895 1.28231 1.01279 1.07763 1.05901 1.19117 0.96906 0.93928 0.92217 1.21426 0.95908 0.97089 0.98110 1.21297 0.99674 0.94807 0.98018 1.20382 0.99666 0.97827 0.94226 1.25113 0.96153 0.83783 1.14136 1.86492 1.47251 1.48431 1.53854 0.85209 0.79173 0.79830 0.75124 1.17130 1.20162 1.17440 1.20901 0.96035 0.94658 0.99232 1.21282 0.99305 0.96691 0.90568 1.98366 1.70395 1.92977 1.42660 0.77553 0.64462 0.61763 0.67177 1.26163 1.05080 1.06444 1.18345 1.26271 1.18900 1.04782 1.06773 1.26262 1.09094 1.12125 1.09211 0.89850 0.85719 0.82396 0.84101 0.85881 0.76220 0.84845 0.90709 0.90734 0.90754 0.92280 0.90747 0.91253 0.90578 0.90635 0.91698 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 0.16 12.70 66.67 0.85 1.01 16 2 C -0.39 0.43 3.56 23.65 0.08 0.52 16 3 C -0.02 -0.03 4.91 -20.10 -0.10 -0.13 16 4 C -0.11 0.09 9.41 22.52 0.21 0.30 16 5 C -0.12 0.10 8.65 22.24 0.19 0.29 16 6 C -0.12 -0.10 5.40 -19.82 -0.11 -0.20 16 7 C -0.08 0.09 2.82 71.24 0.20 0.29 16 8 O -0.55 -0.37 12.76 -148.98 -1.90 -2.27 16 9 Si 0.98 -2.25 25.06 68.60 1.72 -0.53 16 10 H -0.25 0.69 7.11 99.48 0.71 1.39 16 11 H -0.28 -0.45 7.11 99.48 0.71 0.25 16 12 H -0.25 0.51 7.11 99.48 0.71 1.22 16 13 C -0.09 -0.31 9.38 22.25 0.21 -0.10 16 14 C -0.05 -0.22 6.32 22.58 0.14 -0.07 16 15 Cl -0.07 -0.36 27.33 -2.72 -0.07 -0.44 16 16 Si 1.10 -5.18 12.09 68.60 0.83 -4.35 16 17 C -0.45 2.30 8.65 113.37 0.98 3.28 16 18 C -0.46 0.68 8.65 113.37 0.98 1.67 16 19 C -0.46 1.49 8.65 113.37 0.98 2.47 16 20 H 0.08 0.06 8.05 -2.91 -0.02 0.04 16 21 H 0.12 -0.68 7.58 -2.91 -0.02 -0.71 16 22 H 0.16 -0.91 8.06 -2.91 -0.02 -0.94 16 23 H 0.14 -0.62 4.86 -2.91 -0.01 -0.64 16 24 H 0.12 -0.28 7.96 -2.39 -0.02 -0.30 16 25 H 0.39 -2.20 8.70 -74.06 -0.64 -2.84 16 26 H 0.13 0.45 8.06 -2.91 -0.02 0.43 16 27 H 0.07 -0.43 7.96 -2.38 -0.02 -0.45 16 28 H 0.07 -0.38 7.96 -2.38 -0.02 -0.40 16 29 H 0.07 -0.40 7.96 -2.39 -0.02 -0.42 16 30 H 0.06 0.05 7.96 -2.39 -0.02 0.03 16 31 H 0.07 -0.18 7.96 -2.38 -0.02 -0.20 16 32 H 0.07 -0.10 7.96 -2.39 -0.02 -0.12 16 33 H 0.08 -0.33 7.81 -2.39 -0.02 -0.35 16 34 H 0.07 -0.28 7.96 -2.38 -0.02 -0.30 16 35 H 0.06 -0.10 7.96 -2.39 -0.02 -0.12 16 Total: 0.00 -9.04 312.43 6.38 -2.67 By element: Atomic # 1 Polarization: -5.58 SS G_CDS: 1.18 Total: -4.40 kcal Atomic # 6 Polarization: 4.70 SS G_CDS: 4.62 Total: 9.33 kcal Atomic # 8 Polarization: -0.37 SS G_CDS: -1.90 Total: -2.27 kcal Atomic # 14 Polarization: -7.43 SS G_CDS: 2.55 Total: -4.88 kcal Atomic # 17 Polarization: -0.36 SS G_CDS: -0.07 Total: -0.44 kcal Total: -9.04 6.38 -2.67 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_271570_14761194_13286580.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -34.202 kcal (2) G-P(sol) polarization free energy of solvation -9.045 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -43.247 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 6.377 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -2.668 kcal (6) G-S(sol) free energy of system = (1) + (5) -36.870 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.42 seconds