Wall clock time and date at job start Mon Mar 8 2021 11:03:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.32563 * 1 3 3 C 1.47807 * 120.00375 * 2 1 4 4 C 1.39516 * 120.13630 * 313.48036 * 3 2 1 5 5 C 1.38000 * 119.88326 * 179.97438 * 4 3 2 6 6 C 1.50700 * 119.92192 * 179.97438 * 5 4 3 7 7 O 1.42901 * 109.47359 * 299.97664 * 6 5 4 8 8 Si 1.86300 * 109.47205 * 179.97438 * 6 5 4 9 9 H 1.48503 * 109.47060 * 60.00018 * 8 6 5 10 10 H 1.48499 * 109.47346 * 179.97438 * 8 6 5 11 11 H 1.48496 * 109.47452 * 300.00465 * 8 6 5 12 12 C 1.38301 * 120.15782 * 359.97438 * 5 4 3 13 13 C 1.38487 * 120.27038 * 0.02562 * 12 5 4 14 14 Cl 1.73599 * 119.94164 * 180.02562 * 13 12 5 15 15 C 1.38066 * 120.11206 * 359.97438 * 13 12 5 16 16 Si 1.86804 * 119.99395 * 180.02562 * 2 1 3 17 17 C 1.86302 * 109.47238 * 273.18312 * 16 2 1 18 18 C 1.86296 * 109.47550 * 33.18892 * 16 2 1 19 19 C 1.86307 * 109.46848 * 153.18722 * 16 2 1 20 20 H 1.07995 * 120.00444 * 180.02562 * 1 2 3 21 21 H 1.08000 * 119.99868 * 359.97438 * 1 2 3 22 22 H 1.08005 * 120.06153 * 359.97438 * 4 3 2 23 23 H 1.08999 * 109.47030 * 59.97908 * 6 5 4 24 24 H 0.96698 * 113.99819 * 300.00228 * 7 6 5 25 25 H 1.08001 * 119.86555 * 179.74458 * 12 5 4 26 26 H 1.08005 * 120.07226 * 180.02562 * 15 13 12 27 27 H 1.09005 * 109.46584 * 60.00506 * 17 16 2 28 28 H 1.08992 * 109.47097 * 180.02562 * 17 16 2 29 29 H 1.09007 * 109.47077 * 300.01035 * 17 16 2 30 30 H 1.09004 * 109.47444 * 59.99870 * 18 16 2 31 31 H 1.08995 * 109.47097 * 179.97438 * 18 16 2 32 32 H 1.09000 * 109.46764 * 299.99695 * 18 16 2 33 33 H 1.09001 * 109.46779 * 65.83846 * 19 16 2 34 34 H 1.08997 * 109.47036 * 185.83159 * 19 16 2 35 35 H 1.08995 * 109.47342 * 305.84200 * 19 16 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.3256 0.0000 0.0000 3 6 2.0648 1.2800 0.0000 4 6 1.6960 2.3018 -0.8755 5 6 2.3894 3.4949 -0.8707 6 6 1.9922 4.5990 -1.8164 7 8 2.1083 4.1369 -3.1637 8 14 3.1127 6.0658 -1.5642 9 1 4.5180 5.6669 -1.8313 10 1 2.7217 7.1535 -2.4965 11 1 2.9921 6.5460 -0.1642 12 6 3.4479 3.6799 -0.0001 13 6 3.8194 2.6700 0.8717 14 17 5.1490 2.9116 1.9614 15 6 3.1335 1.4718 0.8764 16 14 2.2595 -1.6179 -0.0007 17 6 2.4855 -2.2053 1.7528 18 6 1.2970 -2.8902 -0.9627 19 6 3.9276 -1.3716 -0.7930 20 1 -0.5400 -0.9352 0.0004 21 1 -0.5400 0.9353 0.0004 22 1 0.8694 2.1592 -1.5559 23 1 0.9608 4.8918 -1.6204 24 1 3.0016 3.8590 -3.4086 25 1 3.9899 4.6141 -0.0032 26 1 3.4235 0.6848 1.5568 27 1 1.5094 -2.3494 2.2162 28 1 3.0307 -3.1490 1.7523 29 1 3.0486 -1.4608 2.3156 30 1 1.1648 -2.5465 -1.9887 31 1 1.8421 -3.8340 -0.9635 32 1 0.3210 -3.0343 -0.4992 33 1 4.5293 -0.7064 -0.1735 34 1 4.4306 -2.3339 -0.8874 35 1 3.7990 -0.9302 -1.7812 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_271570_14761194_13453786.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 11:03:56 Heat of formation + Delta-G solvation = -37.592556 kcal Electronic energy + Delta-G solvation = -16499.915758 eV Core-core repulsion = 13840.571397 eV Total energy + Delta-G solvation = -2659.344361 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 270.071 amu Computer time = 0.39 seconds Orbital eigenvalues (eV) -40.77869 -37.96443 -37.43059 -34.96729 -32.44142 -30.62339 -29.42580 -28.30213 -28.23795 -26.89223 -24.48597 -22.67741 -20.34287 -18.63218 -17.53928 -16.80580 -16.59631 -16.26094 -15.66094 -15.37488 -14.88348 -14.66507 -14.17767 -14.06779 -13.86253 -13.77238 -13.31732 -13.20841 -13.14510 -13.03946 -12.97926 -12.80819 -12.53511 -12.37459 -12.24309 -11.92269 -11.76476 -11.33158 -10.91569 -10.78271 -10.58526 -10.28541 -9.81340 -9.40258 -0.09560 0.06421 0.99695 1.10754 1.18901 1.39204 1.46155 1.80590 1.85821 1.99126 2.18734 2.54669 2.71992 3.43004 3.55589 3.69539 3.95653 4.15467 4.19252 4.47604 4.56583 4.68861 4.80135 4.82103 4.83398 4.86366 4.87370 4.88749 4.93621 5.03348 5.16270 5.29512 5.42071 5.57456 5.63609 5.67248 5.70332 5.84900 6.63824 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.118 4.118 2 C -0.392 4.392 3 C -0.018 4.018 4 C -0.092 4.092 5 C -0.103 4.103 6 C -0.072 4.072 7 O -0.547 6.547 8 Si 0.967 3.033 9 H -0.253 1.253 10 H -0.268 1.268 11 H -0.258 1.258 12 C -0.139 4.139 13 C -0.034 4.034 14 Cl -0.073 7.073 15 C -0.114 4.114 16 Si 1.104 2.896 17 C -0.461 4.461 18 C -0.458 4.458 19 C -0.463 4.463 20 H 0.125 0.875 21 H 0.093 0.907 22 H 0.140 0.860 23 H 0.132 0.868 24 H 0.390 0.610 25 H 0.132 0.868 26 H 0.148 0.852 27 H 0.072 0.928 28 H 0.074 0.926 29 H 0.067 0.933 30 H 0.070 0.930 31 H 0.074 0.926 32 H 0.076 0.924 33 H 0.064 0.936 34 H 0.073 0.927 35 H 0.065 0.935 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.593 -2.393 -0.491 2.916 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C -0.432 4.432 3 C -0.018 4.018 4 C -0.110 4.110 5 C -0.104 4.104 6 C -0.183 4.183 7 O -0.354 6.354 8 Si 0.792 3.208 9 H -0.177 1.177 10 H -0.193 1.193 11 H -0.183 1.183 12 C -0.157 4.157 13 C -0.060 4.060 14 Cl -0.044 7.044 15 C -0.133 4.133 16 Si 1.292 2.708 17 C -0.568 4.568 18 C -0.565 4.565 19 C -0.569 4.569 20 H 0.143 0.857 21 H 0.112 0.888 22 H 0.158 0.842 23 H 0.149 0.851 24 H 0.239 0.761 25 H 0.149 0.851 26 H 0.165 0.835 27 H 0.092 0.908 28 H 0.093 0.907 29 H 0.086 0.914 30 H 0.089 0.911 31 H 0.093 0.907 32 H 0.095 0.905 33 H 0.083 0.917 34 H 0.092 0.908 35 H 0.084 0.916 Dipole moment (debyes) X Y Z Total from point charges -1.581 -1.440 -0.273 2.156 hybrid contribution 0.544 -0.093 0.204 0.589 sum -1.037 -1.534 -0.069 1.853 Atomic orbital electron populations 1.24538 0.95299 1.02984 0.92618 1.28239 1.01476 1.07710 1.05780 1.19129 0.94234 0.94261 0.94183 1.21418 0.99555 0.91625 0.98445 1.20282 0.95486 0.97122 0.97467 1.24921 1.09805 1.00954 0.82607 1.86493 1.36494 1.86559 1.25885 0.85421 0.78500 0.76826 0.80068 1.17728 1.19283 1.18278 1.21055 0.98623 0.99029 0.97022 1.20841 0.93042 0.96460 0.95702 1.98389 1.46019 1.97006 1.62965 1.21340 0.95439 0.96373 1.00128 0.77515 0.64668 0.62081 0.66536 1.26282 1.05019 1.06278 1.19202 1.26225 1.09227 1.12067 1.09005 1.26321 1.18404 1.04733 1.07462 0.85672 0.88847 0.84192 0.85079 0.76134 0.85062 0.83478 0.90840 0.90713 0.91410 0.91104 0.90716 0.90515 0.91681 0.90810 0.91618 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.47 13.31 66.67 0.89 1.36 16 2 C -0.39 1.02 4.41 23.65 0.10 1.12 16 3 C -0.02 -0.01 5.26 -20.12 -0.11 -0.12 16 4 C -0.09 -0.08 8.89 22.52 0.20 0.12 16 5 C -0.10 -0.10 5.38 -19.91 -0.11 -0.21 16 6 C -0.07 0.09 2.82 71.24 0.20 0.29 16 7 O -0.55 0.24 12.77 -148.98 -1.90 -1.67 16 8 Si 0.97 -0.32 25.06 68.60 1.72 1.40 16 9 H -0.25 -0.07 7.11 99.48 0.71 0.63 16 10 H -0.27 -0.66 7.11 99.48 0.71 0.04 16 11 H -0.26 -0.33 7.11 99.48 0.71 0.38 16 12 C -0.14 -0.37 8.45 22.34 0.19 -0.18 16 13 C -0.03 -0.12 6.31 22.29 0.14 0.02 16 14 Cl -0.07 -0.30 28.95 -2.72 -0.08 -0.37 16 15 C -0.11 -0.19 8.44 22.54 0.19 0.00 16 16 Si 1.10 -6.06 11.17 68.60 0.77 -5.29 16 17 C -0.46 1.83 8.65 113.37 0.98 2.82 16 18 C -0.46 2.25 8.56 113.37 0.97 3.22 16 19 C -0.46 1.05 8.63 113.37 0.98 2.02 16 20 H 0.13 -0.97 7.37 -2.91 -0.02 -0.99 16 21 H 0.09 -0.33 7.84 -2.91 -0.02 -0.35 16 22 H 0.14 -0.09 7.94 -2.91 -0.02 -0.12 16 23 H 0.13 -0.46 7.96 -2.39 -0.02 -0.48 16 24 H 0.39 -2.46 8.70 -74.06 -0.64 -3.11 16 25 H 0.13 0.19 4.86 -2.91 -0.01 0.17 16 26 H 0.15 -0.17 6.99 -2.91 -0.02 -0.19 16 27 H 0.07 -0.31 7.96 -2.38 -0.02 -0.33 16 28 H 0.07 -0.31 7.96 -2.39 -0.02 -0.33 16 29 H 0.07 -0.23 7.61 -2.38 -0.02 -0.25 16 30 H 0.07 -0.31 7.96 -2.39 -0.02 -0.32 16 31 H 0.07 -0.36 7.96 -2.39 -0.02 -0.38 16 32 H 0.08 -0.46 7.69 -2.39 -0.02 -0.48 16 33 H 0.06 -0.07 7.48 -2.39 -0.02 -0.09 16 34 H 0.07 -0.22 7.96 -2.39 -0.02 -0.23 16 35 H 0.06 -0.08 7.96 -2.39 -0.02 -0.10 16 Total: 0.00 -8.32 310.60 6.32 -1.99 By element: Atomic # 1 Polarization: -7.71 SS G_CDS: 1.19 Total: -6.52 kcal Atomic # 6 Polarization: 5.83 SS G_CDS: 4.63 Total: 10.46 kcal Atomic # 8 Polarization: 0.24 SS G_CDS: -1.90 Total: -1.67 kcal Atomic # 14 Polarization: -6.38 SS G_CDS: 2.49 Total: -3.89 kcal Atomic # 17 Polarization: -0.30 SS G_CDS: -0.08 Total: -0.37 kcal Total: -8.32 6.32 -1.99 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_271570_14761194_13453786.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -35.598 kcal (2) G-P(sol) polarization free energy of solvation -8.316 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -43.914 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 6.322 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -1.995 kcal (6) G-S(sol) free energy of system = (1) + (5) -37.593 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.39 seconds