Wall clock time and date at job start Mon Mar 8 2021 11:05:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.32559 * 1 3 3 C 1.47827 * 119.99878 * 2 1 4 4 C 1.39834 * 120.52842 * 226.63081 * 3 2 1 5 5 C 1.38886 * 118.24469 * 180.24120 * 4 3 2 6 6 O 1.35922 * 120.40319 * 179.78936 * 5 4 3 7 7 C 1.38805 * 119.19623 * 359.50809 * 5 4 3 8 8 C 1.50696 * 119.50430 * 180.27430 * 7 5 4 9 9 O 1.42903 * 109.47345 * 330.00278 * 8 7 5 10 10 Si 1.86305 * 109.47312 * 210.00423 * 8 7 5 11 11 H 1.48497 * 109.47289 * 180.02562 * 10 8 7 12 12 H 1.48504 * 109.46744 * 299.99876 * 10 8 7 13 13 H 1.48504 * 109.46936 * 59.99893 * 10 8 7 14 14 N 1.31882 * 120.99077 * 0.25706 * 7 5 4 15 15 C 1.31679 * 121.93636 * 359.97438 * 14 7 5 16 16 Si 1.86804 * 120.00109 * 179.97438 * 2 1 3 17 17 C 1.86298 * 109.46818 * 181.75873 * 16 2 1 18 18 C 1.86292 * 109.47308 * 301.75963 * 16 2 1 19 19 C 1.86301 * 109.46982 * 61.76171 * 16 2 1 20 20 H 1.08003 * 119.99790 * 180.02562 * 1 2 3 21 21 H 1.08004 * 120.00444 * 0.02562 * 1 2 3 22 22 H 1.07998 * 120.88023 * 0.02841 * 4 3 2 23 23 H 0.96701 * 113.99668 * 269.72638 * 6 5 4 24 24 H 1.08998 * 109.47266 * 90.00005 * 8 7 5 25 25 H 0.96694 * 114.00295 * 180.02562 * 9 8 7 26 26 H 1.07995 * 119.65575 * 179.97438 * 15 14 7 27 27 H 1.08993 * 109.47312 * 53.71848 * 17 16 2 28 28 H 1.09004 * 109.46894 * 173.72130 * 17 16 2 29 29 H 1.09005 * 109.47133 * 293.71286 * 17 16 2 30 30 H 1.08999 * 109.47240 * 59.99668 * 18 16 2 31 31 H 1.09002 * 109.47492 * 179.97438 * 18 16 2 32 32 H 1.09004 * 109.47612 * 300.00016 * 18 16 2 33 33 H 1.09001 * 109.47182 * 59.99400 * 19 16 2 34 34 H 1.08990 * 109.47302 * 179.97438 * 19 16 2 35 35 H 1.09004 * 109.47026 * 300.00128 * 19 16 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.3256 0.0000 0.0000 3 6 2.0647 1.2802 0.0000 4 6 3.1362 1.4818 -0.8756 5 6 3.8003 2.7008 -0.8318 6 8 4.8505 2.9421 -1.6603 7 6 3.3750 3.6719 0.0641 8 6 4.0867 4.9993 0.1131 9 8 5.4568 4.8189 -0.2507 10 14 3.9888 5.6932 1.8394 11 1 4.6896 7.0015 1.8875 12 1 2.5649 5.8806 2.2174 13 1 4.6331 4.7506 2.7890 14 7 2.3571 3.4504 0.8729 15 6 1.7006 2.3089 0.8700 16 14 2.2596 -1.6177 0.0007 17 6 4.0905 -1.2776 0.0545 18 6 1.7696 -2.6172 1.4945 19 6 1.8504 -2.5717 -1.5463 20 1 -0.5400 -0.9354 0.0004 21 1 -0.5401 0.9353 -0.0004 22 1 3.4414 0.7088 -1.5653 23 1 5.7085 2.6923 -1.2908 24 1 3.6138 5.6911 -0.5839 25 1 5.9771 5.6339 -0.2404 26 1 0.8726 2.1669 1.5486 27 1 4.3143 -0.6258 0.8989 28 1 4.6315 -2.2172 0.1673 29 1 4.3970 -0.7909 -0.8715 30 1 0.6983 -2.8161 1.4631 31 1 2.3142 -3.5613 1.4947 32 1 2.0090 -2.0590 2.3997 33 1 2.1371 -1.9870 -2.4203 34 1 2.3957 -3.5154 -1.5461 35 1 0.7791 -2.7707 -1.5778 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_271570_14761194_13453832.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 11:05:48 Heat of formation + Delta-G solvation = -67.564799 kcal Electronic energy + Delta-G solvation = -16869.022523 eV Core-core repulsion = 14184.070158 eV Total energy + Delta-G solvation = -2684.952366 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 253.105 amu Computer time = 0.31 seconds Orbital eigenvalues (eV) -41.53758 -38.27189 -37.52228 -35.54363 -32.20820 -31.21016 -29.62516 -28.48398 -28.47993 -26.97709 -24.51658 -23.28952 -20.94351 -19.08026 -18.26864 -17.81803 -17.30500 -16.36182 -16.26707 -15.64692 -15.07386 -14.63629 -14.61374 -14.24269 -14.05877 -13.99940 -13.84389 -13.70070 -13.38652 -13.28928 -13.19375 -13.09206 -12.76896 -12.33509 -11.93350 -11.85922 -11.59417 -11.27270 -10.97039 -10.87456 -10.45770 -10.20040 -10.04914 -9.27958 -0.18111 0.20592 1.01312 1.28832 1.59992 1.63453 1.70865 1.77623 2.01137 2.15409 2.46330 2.68477 2.90794 3.30943 3.68151 3.79308 3.93094 4.01500 4.30942 4.56149 4.58209 4.64086 4.64956 4.67014 4.68869 4.69149 4.69669 4.76878 4.97377 5.11565 5.24177 5.39029 5.47177 5.47967 5.53383 5.68679 6.55529 6.73868 6.95444 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.118 4.118 2 C -0.374 4.374 3 C -0.066 4.066 4 C -0.106 4.106 5 C 0.096 3.904 6 O -0.476 6.476 7 C 0.097 3.903 8 C -0.068 4.068 9 O -0.546 6.546 10 Si 0.979 3.021 11 H -0.265 1.265 12 H -0.242 1.242 13 H -0.257 1.257 14 N -0.467 5.467 15 C 0.096 3.904 16 Si 1.051 2.949 17 C -0.450 4.450 18 C -0.448 4.448 19 C -0.449 4.449 20 H 0.108 0.892 21 H 0.097 0.903 22 H 0.145 0.855 23 H 0.396 0.604 24 H 0.084 0.916 25 H 0.386 0.614 26 H 0.161 0.839 27 H 0.069 0.931 28 H 0.072 0.928 29 H 0.070 0.930 30 H 0.070 0.930 31 H 0.072 0.928 32 H 0.071 0.929 33 H 0.070 0.930 34 H 0.072 0.928 35 H 0.070 0.930 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.286 -1.890 0.166 1.919 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.155 4.155 2 C -0.415 4.415 3 C -0.068 4.068 4 C -0.132 4.132 5 C 0.049 3.951 6 O -0.286 6.286 7 C -0.041 4.041 8 C -0.178 4.178 9 O -0.352 6.352 10 Si 0.800 3.200 11 H -0.189 1.189 12 H -0.165 1.165 13 H -0.180 1.180 14 N -0.178 5.178 15 C -0.062 4.062 16 Si 1.242 2.758 17 C -0.557 4.557 18 C -0.555 4.555 19 C -0.556 4.556 20 H 0.126 0.874 21 H 0.115 0.885 22 H 0.163 0.837 23 H 0.253 0.747 24 H 0.102 0.898 25 H 0.234 0.766 26 H 0.179 0.821 27 H 0.088 0.912 28 H 0.091 0.909 29 H 0.089 0.911 30 H 0.089 0.911 31 H 0.091 0.909 32 H 0.090 0.910 33 H 0.089 0.911 34 H 0.091 0.909 35 H 0.089 0.911 Dipole moment (debyes) X Y Z Total from point charges -0.640 -1.237 1.108 1.780 hybrid contribution 0.665 -0.326 -0.781 1.076 sum 0.024 -1.564 0.327 1.598 Atomic orbital electron populations 1.24308 0.95323 1.02225 0.93624 1.27918 1.01044 1.07532 1.05028 1.19889 0.95679 0.95073 0.96127 1.22151 0.95671 0.96788 0.98589 1.18983 0.92245 0.92366 0.91479 1.84748 1.16332 1.86557 1.40978 1.20948 0.94393 0.95926 0.92787 1.24462 0.84418 0.96540 1.12407 1.86282 1.19050 1.37354 1.92484 0.85189 0.82021 0.78241 0.74585 1.18950 1.16543 1.18035 1.66959 1.06574 1.22812 1.21443 1.22890 0.98265 0.87181 0.97816 0.78331 0.66250 0.63433 0.67771 1.26247 1.19782 1.05128 1.04572 1.26110 1.05674 1.08981 1.14758 1.26131 1.05386 1.08652 1.15439 0.87409 0.88500 0.83724 0.74650 0.89792 0.76628 0.82139 0.91160 0.90918 0.91103 0.91120 0.90898 0.91020 0.91086 0.90882 0.91110 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.20 13.32 28.82 0.38 0.58 16 2 C -0.37 0.39 4.43 -37.57 -0.17 0.22 16 3 C -0.07 -0.06 5.25 -104.89 -0.55 -0.61 16 4 C -0.11 -0.14 8.29 -38.74 -0.32 -0.46 16 5 C 0.10 0.25 6.59 -39.13 -0.26 -0.01 16 6 O -0.48 -0.92 11.54 -42.42 -0.49 -1.41 16 7 C 0.10 0.31 6.12 -82.36 -0.50 -0.19 16 8 C -0.07 -0.08 2.91 36.00 0.10 0.03 16 9 O -0.55 0.13 10.27 -58.15 -0.60 -0.47 16 10 Si 0.98 1.27 27.16 -169.99 -4.62 -3.35 16 11 H -0.26 -0.19 7.11 56.52 0.40 0.21 16 12 H -0.24 -0.70 7.11 56.52 0.40 -0.30 16 13 H -0.26 -0.79 7.11 56.52 0.40 -0.39 16 14 N -0.47 -1.68 8.34 -9.03 -0.08 -1.75 16 15 C 0.10 0.18 10.51 -17.13 -0.18 0.00 16 16 Si 1.05 -2.83 11.71 -169.99 -1.99 -4.82 16 17 C -0.45 0.73 7.71 101.05 0.78 1.51 16 18 C -0.45 0.87 8.65 101.05 0.87 1.75 16 19 C -0.45 0.89 8.65 101.05 0.87 1.77 16 20 H 0.11 -0.37 7.73 -52.48 -0.41 -0.77 16 21 H 0.10 -0.15 7.85 -52.48 -0.41 -0.57 16 22 H 0.15 -0.07 6.05 -52.49 -0.32 -0.39 16 23 H 0.40 -0.50 8.54 45.56 0.39 -0.11 16 24 H 0.08 0.01 7.96 -51.93 -0.41 -0.40 16 25 H 0.39 -1.69 8.74 45.56 0.40 -1.29 16 26 H 0.16 -0.04 7.94 -52.49 -0.42 -0.46 16 27 H 0.07 -0.06 7.96 -51.93 -0.41 -0.47 16 28 H 0.07 -0.14 7.96 -51.93 -0.41 -0.55 16 29 H 0.07 -0.12 6.25 -51.93 -0.32 -0.45 16 30 H 0.07 -0.16 7.96 -51.93 -0.41 -0.57 16 31 H 0.07 -0.15 7.96 -51.93 -0.41 -0.56 16 32 H 0.07 -0.11 7.96 -51.93 -0.41 -0.52 16 33 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 34 H 0.07 -0.15 7.96 -51.93 -0.41 -0.57 16 35 H 0.07 -0.15 7.96 -51.93 -0.41 -0.56 16 LS Contribution 297.54 15.07 4.48 4.48 Total: 0.00 -6.13 297.54 -5.86 -11.99 By element: Atomic # 1 Polarization: -5.65 SS G_CDS: -3.61 Total: -9.26 kcal Atomic # 6 Polarization: 3.55 SS G_CDS: 1.04 Total: 4.59 kcal Atomic # 7 Polarization: -1.68 SS G_CDS: -0.08 Total: -1.75 kcal Atomic # 8 Polarization: -0.80 SS G_CDS: -1.09 Total: -1.88 kcal Atomic # 14 Polarization: -1.56 SS G_CDS: -6.61 Total: -8.17 kcal Total LS contribution 4.48 Total: 4.48 kcal Total: -6.13 -5.86 -11.99 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_271570_14761194_13453832.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -55.580 kcal (2) G-P(sol) polarization free energy of solvation -6.129 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -61.709 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.856 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -11.985 kcal (6) G-S(sol) free energy of system = (1) + (5) -67.565 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.31 seconds