Wall clock time and date at job start Mon Mar 8 2021 11:09:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.32570 * 1 3 3 C 1.47817 * 119.99908 * 2 1 4 4 C 1.39500 * 120.56097 * 179.97438 * 3 2 1 5 5 N 1.31716 * 120.56905 * 179.97438 * 4 3 2 6 6 C 1.31895 * 121.87543 * 0.03067 * 5 4 3 7 7 C 1.50694 * 119.46258 * 179.97438 * 6 5 4 8 8 O 1.42904 * 109.47328 * 150.01892 * 7 6 5 9 9 Si 1.86302 * 109.47444 * 30.01745 * 7 6 5 10 10 H 1.48504 * 109.46650 * 60.00097 * 9 7 6 11 11 H 1.48497 * 109.47243 * 179.97438 * 9 7 6 12 12 H 1.48503 * 109.47112 * 300.00275 * 9 7 6 13 13 C 1.38336 * 121.07288 * 0.02562 * 6 5 4 14 14 C 1.50703 * 120.34623 * 179.97438 * 13 6 5 15 15 C 1.38367 * 119.30695 * 0.25667 * 13 6 5 16 16 Si 1.86797 * 120.00400 * 179.97438 * 2 1 3 17 17 C 1.86297 * 109.47359 * 240.00514 * 16 2 1 18 18 C 1.86305 * 109.46732 * 0.02562 * 16 2 1 19 19 C 1.86301 * 109.47184 * 120.00012 * 16 2 1 20 20 H 1.07997 * 119.99294 * 180.02562 * 1 2 3 21 21 H 1.07998 * 119.99861 * 0.02562 * 1 2 3 22 22 H 1.08005 * 119.70974 * 0.02803 * 4 3 2 23 23 H 1.09007 * 109.47352 * 270.01914 * 7 6 5 24 24 H 0.96698 * 113.99772 * 299.99771 * 8 7 6 25 25 H 1.09002 * 109.47152 * 90.00140 * 14 13 6 26 26 H 1.09001 * 109.46980 * 330.00240 * 14 13 6 27 27 H 1.09004 * 109.47113 * 210.00221 * 14 13 6 28 28 H 1.07991 * 120.85547 * 179.70084 * 15 13 6 29 29 H 1.09000 * 109.47343 * 60.00019 * 17 16 2 30 30 H 1.08998 * 109.47025 * 180.02562 * 17 16 2 31 31 H 1.09006 * 109.46922 * 299.99358 * 17 16 2 32 32 H 1.08998 * 109.47630 * 59.99750 * 18 16 2 33 33 H 1.09002 * 109.46762 * 180.02562 * 18 16 2 34 34 H 1.09000 * 109.47308 * 299.99576 * 18 16 2 35 35 H 1.09005 * 109.46926 * 60.00136 * 19 16 2 36 36 H 1.08998 * 109.47490 * 180.02562 * 19 16 2 37 37 H 1.09003 * 109.47327 * 300.00745 * 19 16 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.3257 0.0000 0.0000 3 6 2.0648 1.2801 0.0000 4 6 3.4597 1.2938 0.0005 5 7 4.1184 2.4344 0.0000 6 6 3.4968 3.5977 -0.0004 7 6 4.3047 4.8698 -0.0004 8 8 3.5752 5.8975 -0.6741 9 14 5.9218 4.5786 -0.8785 10 1 5.6564 4.1607 -2.2786 11 1 6.7176 5.8323 -0.8790 12 1 6.6799 3.5107 -0.1784 13 6 2.1153 3.6691 0.0002 14 6 1.4220 5.0071 0.0003 15 6 1.3767 2.4990 0.0067 16 14 2.2598 -1.6176 0.0007 17 6 3.3308 -1.7157 1.5219 18 6 1.0491 -3.0337 0.0006 19 6 3.3309 -1.7170 -1.5204 20 1 -0.5399 -0.9354 0.0004 21 1 -0.5400 0.9353 -0.0004 22 1 4.0041 0.3610 0.0005 23 1 4.4995 5.1766 1.0273 24 1 3.3665 5.6921 -1.5956 25 1 1.2543 5.3296 -1.0274 26 1 2.0453 5.7393 0.5137 27 1 0.4648 4.9204 0.5146 28 1 0.2971 2.5256 0.0121 29 1 2.7041 -1.6577 2.4119 30 1 3.8761 -2.6594 1.5221 31 1 4.0391 -0.8872 1.5216 32 1 0.4228 -2.9762 -0.8896 33 1 1.5942 -3.9777 0.0015 34 1 0.4222 -2.9758 0.8903 35 1 4.0392 -0.8884 -1.5207 36 1 3.8756 -2.6611 -1.5202 37 1 2.7043 -1.6595 -2.4104 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_271570_14761194_13614048.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 11:09:07 Heat of formation + Delta-G solvation = -27.161136 kcal Electronic energy + Delta-G solvation = -16648.409954 eV Core-core repulsion = 14128.354195 eV Total energy + Delta-G solvation = -2520.055758 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 251.121 amu Computer time = 0.34 seconds Orbital eigenvalues (eV) -41.53979 -38.14525 -35.64437 -34.31682 -31.49541 -29.74017 -28.68702 -28.57706 -28.45929 -26.86023 -23.79227 -23.16660 -20.26074 -18.79315 -17.92698 -17.10437 -16.50296 -16.18284 -15.19675 -14.87357 -14.78815 -14.45139 -14.41330 -14.15285 -14.08921 -13.76143 -13.58965 -13.53588 -13.32444 -13.29564 -13.15724 -13.05741 -12.99987 -12.34545 -12.03405 -11.81236 -11.76992 -10.99363 -10.94585 -10.86405 -10.66903 -10.24019 -10.09841 -9.18477 -0.28044 0.27585 1.14577 1.35947 1.60097 1.64101 1.74964 1.75905 2.03691 2.16611 2.46084 2.90210 3.13681 3.35400 3.76613 3.80165 3.91637 4.06561 4.24930 4.52942 4.59024 4.62206 4.63202 4.66825 4.68281 4.71171 4.71743 4.76673 4.79148 4.82116 5.00749 5.16320 5.33047 5.37821 5.40646 5.49896 5.50923 5.65316 5.78469 6.41305 6.96597 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.129 4.129 2 C -0.369 4.369 3 C -0.076 4.076 4 C 0.092 3.908 5 N -0.473 5.473 6 C 0.080 3.920 7 C -0.074 4.074 8 O -0.535 6.535 9 Si 0.981 3.019 10 H -0.260 1.260 11 H -0.262 1.262 12 H -0.242 1.242 13 C -0.107 4.107 14 C -0.112 4.112 15 C -0.082 4.082 16 Si 1.045 2.955 17 C -0.451 4.451 18 C -0.449 4.449 19 C -0.451 4.451 20 H 0.110 0.890 21 H 0.095 0.905 22 H 0.160 0.840 23 H 0.127 0.873 24 H 0.376 0.624 25 H 0.072 0.928 26 H 0.097 0.903 27 H 0.055 0.945 28 H 0.136 0.864 29 H 0.071 0.929 30 H 0.073 0.927 31 H 0.071 0.929 32 H 0.071 0.929 33 H 0.074 0.926 34 H 0.071 0.929 35 H 0.070 0.930 36 H 0.073 0.927 37 H 0.071 0.929 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.211 -1.585 -0.469 2.761 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.165 4.165 2 C -0.411 4.411 3 C -0.078 4.078 4 C -0.065 4.065 5 N -0.183 5.183 6 C -0.057 4.057 7 C -0.184 4.184 8 O -0.339 6.339 9 Si 0.802 3.198 10 H -0.184 1.184 11 H -0.187 1.187 12 H -0.165 1.165 13 C -0.108 4.108 14 C -0.169 4.169 15 C -0.107 4.107 16 Si 1.237 2.763 17 C -0.559 4.559 18 C -0.557 4.557 19 C -0.559 4.559 20 H 0.128 0.872 21 H 0.113 0.887 22 H 0.177 0.823 23 H 0.144 0.856 24 H 0.224 0.776 25 H 0.091 0.909 26 H 0.116 0.884 27 H 0.074 0.926 28 H 0.153 0.847 29 H 0.090 0.910 30 H 0.092 0.908 31 H 0.090 0.910 32 H 0.090 0.910 33 H 0.093 0.907 34 H 0.090 0.910 35 H 0.090 0.910 36 H 0.092 0.908 37 H 0.090 0.910 Dipole moment (debyes) X Y Z Total from point charges -0.495 -1.358 -0.313 1.479 hybrid contribution -1.683 -0.227 -0.221 1.713 sum -2.178 -1.585 -0.534 2.746 Atomic orbital electron populations 1.24433 0.95742 1.02237 0.94068 1.27976 1.01183 1.07818 1.04168 1.19971 0.94395 0.93848 0.99597 1.22923 0.90828 0.95981 0.96785 1.67056 1.40938 0.98025 1.12251 1.21600 0.91725 0.93923 0.98497 1.24875 1.03993 0.85587 1.03989 1.86579 1.76711 1.41886 1.28771 0.85131 0.75319 0.79866 0.79497 1.18415 1.18663 1.16504 1.20673 0.93836 0.96909 0.99431 1.20999 0.99708 0.93164 1.03022 1.21762 1.00522 0.91225 0.97181 0.78425 0.66512 0.63511 0.67845 1.26209 1.09721 1.04804 1.15155 1.26125 1.11286 1.13667 1.04604 1.26211 1.09726 1.04796 1.15161 0.87188 0.88675 0.82270 0.85554 0.77612 0.90894 0.88403 0.92577 0.84654 0.90958 0.90771 0.91023 0.91010 0.90689 0.91010 0.91046 0.90760 0.90967 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 0.17 13.40 28.83 0.39 0.56 16 2 C -0.37 0.23 4.70 -37.57 -0.18 0.05 16 3 C -0.08 -0.10 5.85 -104.86 -0.61 -0.71 16 4 C 0.09 0.18 9.92 -17.13 -0.17 0.01 16 5 N -0.47 -1.52 8.34 -9.15 -0.08 -1.60 16 6 C 0.08 0.17 6.08 -82.53 -0.50 -0.33 16 7 C -0.07 -0.04 2.58 36.00 0.09 0.06 16 8 O -0.53 0.21 9.08 -35.23 -0.32 -0.11 16 9 Si 0.98 1.23 27.16 -169.99 -4.62 -3.38 16 10 H -0.26 -0.56 7.11 56.52 0.40 -0.16 16 11 H -0.26 -0.51 7.11 56.52 0.40 -0.10 16 12 H -0.24 -0.66 7.11 56.52 0.40 -0.26 16 13 C -0.11 -0.14 5.85 -104.54 -0.61 -0.75 16 14 C -0.11 0.05 8.30 36.01 0.30 0.35 16 15 C -0.08 -0.09 9.18 -38.89 -0.36 -0.45 16 16 Si 1.05 -2.53 10.81 -169.99 -1.84 -4.37 16 17 C -0.45 0.64 8.65 101.05 0.87 1.51 16 18 C -0.45 0.99 7.86 101.05 0.79 1.79 16 19 C -0.45 0.66 8.65 101.05 0.87 1.54 16 20 H 0.11 -0.31 7.05 -52.49 -0.37 -0.68 16 21 H 0.10 -0.16 6.10 -52.49 -0.32 -0.48 16 22 H 0.16 -0.02 3.74 -52.48 -0.20 -0.22 16 23 H 0.13 -0.06 7.96 -51.93 -0.41 -0.47 16 24 H 0.38 -1.15 8.29 45.56 0.38 -0.77 16 25 H 0.07 -0.11 7.71 -51.93 -0.40 -0.51 16 26 H 0.10 0.01 5.91 -51.93 -0.31 -0.29 16 27 H 0.06 -0.05 8.09 -51.93 -0.42 -0.47 16 28 H 0.14 -0.08 6.29 -52.49 -0.33 -0.41 16 29 H 0.07 -0.08 7.96 -51.93 -0.41 -0.50 16 30 H 0.07 -0.14 7.96 -51.93 -0.41 -0.55 16 31 H 0.07 -0.07 6.59 -51.93 -0.34 -0.41 16 32 H 0.07 -0.17 7.96 -51.93 -0.41 -0.58 16 33 H 0.07 -0.17 7.96 -51.93 -0.41 -0.58 16 34 H 0.07 -0.16 7.96 -51.93 -0.41 -0.58 16 35 H 0.07 -0.08 6.60 -51.93 -0.34 -0.42 16 36 H 0.07 -0.14 7.96 -51.93 -0.41 -0.55 16 37 H 0.07 -0.09 7.96 -51.93 -0.41 -0.50 16 LS Contribution 297.80 15.07 4.49 4.49 Total: 0.00 -4.62 297.80 -6.23 -10.85 By element: Atomic # 1 Polarization: -4.75 SS G_CDS: -4.75 Total: -9.50 kcal Atomic # 6 Polarization: 2.73 SS G_CDS: 0.89 Total: 3.62 kcal Atomic # 7 Polarization: -1.52 SS G_CDS: -0.08 Total: -1.60 kcal Atomic # 8 Polarization: 0.21 SS G_CDS: -0.32 Total: -0.11 kcal Atomic # 14 Polarization: -1.30 SS G_CDS: -6.45 Total: -7.75 kcal Total LS contribution 4.49 Total: 4.49 kcal Total: -4.62 -6.23 -10.85 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_271570_14761194_13614048.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -16.311 kcal (2) G-P(sol) polarization free energy of solvation -4.624 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -20.935 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.226 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -10.850 kcal (6) G-S(sol) free energy of system = (1) + (5) -27.161 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.34 seconds