Wall clock time and date at job start Mon Mar 8 2021 11:15:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.32570 * 1 3 3 C 1.47799 * 120.00152 * 2 1 4 4 C 1.39518 * 120.10517 * 0.27551 * 3 2 1 5 5 C 1.37989 * 119.92744 * 180.27502 * 4 3 2 6 6 C 1.50698 * 119.92677 * 179.73158 * 5 4 3 7 7 O 1.42895 * 109.47614 * 14.72263 * 6 5 4 8 8 Si 1.86300 * 109.47338 * 134.72263 * 6 5 4 9 9 H 1.48503 * 109.46942 * 299.99993 * 8 6 5 10 10 H 1.48503 * 109.47276 * 59.99467 * 8 6 5 11 11 H 1.48494 * 109.47372 * 179.97438 * 8 6 5 12 12 C 1.38482 * 120.13969 * 359.44953 * 5 4 3 13 13 F 1.35102 * 119.88690 * 180.30156 * 12 5 4 14 14 C 1.38805 * 120.21732 * 0.27700 * 12 5 4 15 15 F 1.35094 * 119.96287 * 179.97438 * 14 12 5 16 16 C 1.38101 * 120.06818 * 0.02562 * 14 12 5 17 17 Si 1.86801 * 119.99983 * 180.02562 * 2 1 3 18 18 C 1.86301 * 109.47059 * 239.99425 * 17 2 1 19 19 C 1.86295 * 109.47263 * 359.97438 * 17 2 1 20 20 C 1.86304 * 109.47054 * 119.99862 * 17 2 1 21 21 H 1.08001 * 120.00028 * 180.02562 * 1 2 3 22 22 H 1.08000 * 120.00177 * 359.97438 * 1 2 3 23 23 H 1.08001 * 120.03736 * 359.97438 * 4 3 2 24 24 H 1.09001 * 109.47122 * 254.72338 * 6 5 4 25 25 H 0.96698 * 114.00355 * 180.02562 * 7 6 5 26 26 H 1.08004 * 120.06892 * 179.97438 * 16 14 12 27 27 H 1.09004 * 109.46712 * 60.00205 * 18 17 2 28 28 H 1.09002 * 109.46940 * 179.97438 * 18 17 2 29 29 H 1.08997 * 109.47363 * 300.00148 * 18 17 2 30 30 H 1.09001 * 109.47356 * 59.99751 * 19 17 2 31 31 H 1.08999 * 109.47131 * 180.02562 * 19 17 2 32 32 H 1.09004 * 109.47117 * 300.00167 * 19 17 2 33 33 H 1.08997 * 109.47271 * 59.99912 * 20 17 2 34 34 H 1.09002 * 109.46955 * 180.02562 * 20 17 2 35 35 H 1.09001 * 109.46787 * 299.99773 * 20 17 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.3257 0.0000 0.0000 3 6 2.0647 1.2800 0.0000 4 6 1.3694 2.4895 0.0058 5 6 2.0630 3.6824 0.0000 6 6 1.3119 4.9888 0.0002 7 8 -0.0536 4.7533 0.3490 8 14 2.0792 6.1462 1.2422 9 1 2.0119 5.5363 2.5945 10 1 3.4984 6.3911 0.8798 11 1 1.3395 7.4338 1.2419 12 6 3.4479 3.6814 0.0000 13 9 4.1218 4.8523 0.0005 14 6 4.1456 2.4815 0.0000 15 9 5.4966 2.4866 -0.0006 16 6 3.4603 1.2826 -0.0006 17 14 2.2597 -1.6177 -0.0007 18 6 3.3309 -1.7170 1.5203 19 6 1.0491 -3.0338 -0.0006 20 6 3.3307 -1.7158 -1.5220 21 1 -0.5400 -0.9353 0.0004 22 1 -0.5400 0.9353 0.0004 23 1 0.2894 2.4922 0.0099 24 1 1.3613 5.4364 -0.9924 25 1 -0.5981 5.5522 0.3684 26 1 4.0033 0.3489 -0.0010 27 1 2.7042 -1.6597 2.4103 28 1 3.8755 -2.6612 1.5201 29 1 4.0392 -0.8886 1.5206 30 1 0.4221 -2.9758 -0.8903 31 1 1.5941 -3.9777 -0.0005 32 1 0.4228 -2.9762 0.8897 33 1 4.0390 -0.8873 -1.5216 34 1 3.8754 -2.6600 -1.5226 35 1 2.7040 -1.6577 -2.4119 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_271570_14761194_15737978.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 11:15:21 Heat of formation + Delta-G solvation = -112.289555 kcal Electronic energy + Delta-G solvation = -19154.515961 eV Core-core repulsion = 15912.824336 eV Total energy + Delta-G solvation = -3241.691625 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 272.091 amu Computer time = 0.38 seconds Orbital eigenvalues (eV) -50.58379 -49.60977 -40.45626 -37.88660 -34.95240 -32.70684 -30.20929 -29.65669 -28.45860 -28.42645 -27.18060 -24.55274 -22.92016 -20.52961 -19.23356 -18.95927 -17.83606 -17.48256 -17.36796 -16.59829 -16.39102 -15.89039 -15.77925 -15.52297 -14.81915 -14.61574 -14.45367 -14.18568 -14.10615 -13.73674 -13.58106 -13.42125 -13.31082 -13.22646 -13.13852 -12.99622 -12.74479 -12.58391 -11.98575 -11.62614 -11.36013 -10.98879 -10.92843 -10.83322 -10.52927 -9.73313 -9.19182 -0.44352 -0.07277 0.97978 1.18391 1.42102 1.52755 1.60094 1.75566 1.91456 1.99225 2.46344 2.57402 2.61110 3.07618 3.32211 3.43203 3.70738 3.83274 4.04714 4.20314 4.44569 4.58376 4.63882 4.65784 4.66697 4.68331 4.70294 4.71821 4.77492 4.82095 5.10990 5.13817 5.27272 5.40492 5.49971 5.50796 5.60496 5.77709 6.39063 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.119 4.119 2 C -0.377 4.377 3 C -0.007 4.007 4 C -0.079 4.079 5 C -0.078 4.078 6 C -0.079 4.079 7 O -0.544 6.544 8 Si 0.933 3.067 9 H -0.247 1.247 10 H -0.226 1.226 11 H -0.254 1.254 12 C 0.044 3.956 13 F -0.118 7.118 14 C 0.084 3.916 15 F -0.124 7.124 16 C -0.139 4.139 17 Si 1.045 2.955 18 C -0.452 4.452 19 C -0.449 4.449 20 C -0.452 4.452 21 H 0.111 0.889 22 H 0.101 0.899 23 H 0.153 0.847 24 H 0.089 0.911 25 H 0.387 0.613 26 H 0.151 0.849 27 H 0.072 0.928 28 H 0.073 0.927 29 H 0.070 0.930 30 H 0.071 0.929 31 H 0.074 0.926 32 H 0.071 0.929 33 H 0.070 0.930 34 H 0.073 0.927 35 H 0.072 0.928 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.340 -1.513 -0.634 3.722 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.155 4.155 2 C -0.419 4.419 3 C -0.007 4.007 4 C -0.097 4.097 5 C -0.079 4.079 6 C -0.188 4.188 7 O -0.351 6.351 8 Si 0.753 3.247 9 H -0.170 1.170 10 H -0.148 1.148 11 H -0.178 1.178 12 C 0.024 3.976 13 F -0.097 7.097 14 C 0.064 3.936 15 F -0.103 7.103 16 C -0.158 4.158 17 Si 1.237 2.763 18 C -0.560 4.560 19 C -0.557 4.557 20 C -0.559 4.559 21 H 0.129 0.871 22 H 0.119 0.881 23 H 0.170 0.830 24 H 0.107 0.893 25 H 0.236 0.764 26 H 0.169 0.831 27 H 0.091 0.909 28 H 0.092 0.908 29 H 0.089 0.911 30 H 0.090 0.910 31 H 0.093 0.907 32 H 0.090 0.910 33 H 0.089 0.911 34 H 0.092 0.908 35 H 0.091 0.909 Dipole moment (debyes) X Y Z Total from point charges -2.694 -1.454 0.002 3.061 hybrid contribution -0.091 0.657 -0.413 0.781 sum -2.784 -0.798 -0.412 2.925 Atomic orbital electron populations 1.24541 0.95691 1.02620 0.92637 1.27980 1.01248 1.07536 1.05123 1.18837 0.91614 0.93706 0.96586 1.21141 1.01570 0.89305 0.97681 1.19124 0.90174 0.96349 1.02259 1.24515 0.87184 0.99896 1.07208 1.86359 1.18764 1.37335 1.92631 0.86127 0.81786 0.78000 0.78814 1.17048 1.14830 1.17805 1.17425 0.89604 0.81026 1.09527 1.91585 1.80325 1.43772 1.93977 1.17365 0.77580 0.92955 1.05679 1.91559 1.27602 1.97215 1.93903 1.21332 0.94371 0.96921 1.03133 0.78420 0.66529 0.63563 0.67795 1.26222 1.09739 1.04723 1.15273 1.26124 1.11285 1.13622 1.04664 1.26219 1.09727 1.04725 1.15253 0.87055 0.88091 0.82999 0.89342 0.76435 0.83111 0.90857 0.90815 0.91119 0.90955 0.90708 0.90952 0.91116 0.90817 0.90865 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.20 13.39 28.83 0.39 0.59 16 2 C -0.38 0.37 4.70 -37.58 -0.18 0.20 16 3 C -0.01 -0.01 5.84 -105.02 -0.61 -0.62 16 4 C -0.08 -0.10 8.71 -39.20 -0.34 -0.44 16 5 C -0.08 -0.14 5.15 -104.62 -0.54 -0.68 16 6 C -0.08 0.01 2.95 36.00 0.11 0.12 16 7 O -0.54 0.56 11.47 -35.23 -0.40 0.15 16 8 Si 0.93 0.52 26.08 -169.99 -4.43 -3.91 16 9 H -0.25 -0.58 7.11 56.52 0.40 -0.18 16 10 H -0.23 -0.44 5.28 56.52 0.30 -0.15 16 11 H -0.25 -0.03 7.11 56.52 0.40 0.37 16 12 C 0.04 0.13 6.67 -39.28 -0.26 -0.13 16 13 F -0.12 -0.44 12.72 2.25 0.03 -0.41 16 14 C 0.08 0.24 7.30 -39.42 -0.29 -0.05 16 15 F -0.12 -0.47 17.17 2.25 0.04 -0.44 16 16 C -0.14 -0.15 8.68 -39.14 -0.34 -0.49 16 17 Si 1.04 -2.76 10.79 -169.99 -1.83 -4.59 16 18 C -0.45 0.72 8.65 101.05 0.87 1.59 16 19 C -0.45 1.09 7.86 101.05 0.79 1.89 16 20 C -0.45 0.76 8.65 101.05 0.87 1.63 16 21 H 0.11 -0.37 7.05 -52.49 -0.37 -0.74 16 22 H 0.10 -0.19 6.03 -52.49 -0.32 -0.50 16 23 H 0.15 0.04 5.23 -52.49 -0.27 -0.24 16 24 H 0.09 -0.16 7.96 -51.93 -0.41 -0.58 16 25 H 0.39 -2.03 8.74 45.56 0.40 -1.64 16 26 H 0.15 -0.13 3.70 -52.48 -0.19 -0.33 16 27 H 0.07 -0.10 7.96 -51.93 -0.41 -0.52 16 28 H 0.07 -0.14 7.96 -51.93 -0.41 -0.56 16 29 H 0.07 -0.09 6.57 -51.93 -0.34 -0.43 16 30 H 0.07 -0.19 7.96 -51.93 -0.41 -0.60 16 31 H 0.07 -0.18 7.96 -51.93 -0.41 -0.59 16 32 H 0.07 -0.18 7.96 -51.93 -0.41 -0.60 16 33 H 0.07 -0.10 6.57 -51.93 -0.34 -0.44 16 34 H 0.07 -0.15 7.96 -51.93 -0.41 -0.56 16 35 H 0.07 -0.11 7.96 -51.93 -0.41 -0.53 16 LS Contribution 293.91 15.07 4.43 4.43 Total: 0.00 -4.60 293.91 -5.35 -9.94 By element: Atomic # 1 Polarization: -5.14 SS G_CDS: -3.65 Total: -8.79 kcal Atomic # 6 Polarization: 3.13 SS G_CDS: 0.48 Total: 3.61 kcal Atomic # 8 Polarization: 0.56 SS G_CDS: -0.40 Total: 0.15 kcal Atomic # 9 Polarization: -0.91 SS G_CDS: 0.07 Total: -0.84 kcal Atomic # 14 Polarization: -2.24 SS G_CDS: -6.27 Total: -8.50 kcal Total LS contribution 4.43 Total: 4.43 kcal Total: -4.60 -5.35 -9.94 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_271570_14761194_15737978.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -102.348 kcal (2) G-P(sol) polarization free energy of solvation -4.596 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -106.943 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.346 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -9.942 kcal (6) G-S(sol) free energy of system = (1) + (5) -112.290 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.38 seconds