Wall clock time and date at job start Mon Mar 8 2021 11:18:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.32565 * 1 3 3 C 1.47822 * 119.99928 * 2 1 4 4 C 1.39513 * 120.13761 * 46.50902 * 3 2 1 5 5 C 1.37990 * 119.85523 * 180.02562 * 4 3 2 6 6 C 1.50705 * 119.92965 * 179.97438 * 5 4 3 7 7 O 1.42893 * 109.47026 * 299.99618 * 6 5 4 8 8 Si 1.86305 * 109.47080 * 179.97438 * 6 5 4 9 9 H 1.48495 * 109.47149 * 180.02562 * 8 6 5 10 10 H 1.48503 * 109.46977 * 299.99975 * 8 6 5 11 11 H 1.48494 * 109.47066 * 59.99974 * 8 6 5 12 12 C 1.38320 * 120.14259 * 0.26716 * 5 4 3 13 13 C 1.38369 * 120.28339 * 359.45702 * 12 5 4 14 14 N 1.48005 * 119.92909 * 180.27112 * 13 12 5 15 15 O 1.21802 * 119.99930 * 180.27335 * 14 13 12 16 16 O 1.21801 * 120.00228 * 0.27052 * 14 13 12 17 17 C 1.37955 * 120.14262 * 0.54736 * 13 12 5 18 18 Si 1.86796 * 119.99942 * 180.02562 * 2 1 3 19 19 C 1.86304 * 109.46875 * 181.51912 * 18 2 1 20 20 C 1.86297 * 109.47240 * 301.51961 * 18 2 1 21 21 C 1.86300 * 109.47157 * 61.52287 * 18 2 1 22 22 H 1.07995 * 120.00165 * 179.97438 * 1 2 3 23 23 H 1.08000 * 119.99850 * 359.97438 * 1 2 3 24 24 H 1.08006 * 120.07311 * 0.03746 * 4 3 2 25 25 H 1.09001 * 109.46967 * 59.99789 * 6 5 4 26 26 H 0.96699 * 114.00520 * 300.00421 * 7 6 5 27 27 H 1.08003 * 119.85945 * 179.70127 * 12 5 4 28 28 H 1.07994 * 120.07205 * 179.75114 * 17 13 12 29 29 H 1.08996 * 109.47158 * 53.65520 * 19 18 2 30 30 H 1.09002 * 109.47032 * 173.64821 * 19 18 2 31 31 H 1.08996 * 109.47645 * 293.64718 * 19 18 2 32 32 H 1.09000 * 109.47045 * 59.99874 * 20 18 2 33 33 H 1.09000 * 109.47410 * 180.02562 * 20 18 2 34 34 H 1.09003 * 109.47237 * 300.00008 * 20 18 2 35 35 H 1.08999 * 109.47292 * 59.99906 * 21 18 2 36 36 H 1.09000 * 109.47019 * 180.02562 * 21 18 2 37 37 H 1.09004 * 109.47016 * 299.99457 * 21 18 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.3256 0.0000 0.0000 3 6 2.0647 1.2802 0.0000 4 6 1.6958 2.3020 0.8753 5 6 2.3895 3.4949 0.8700 6 6 1.9920 4.6000 1.8144 7 8 0.6403 4.9845 1.5557 8 14 3.1143 6.0656 1.5626 9 1 2.7230 7.1543 2.4936 10 1 4.5188 5.6656 1.8319 11 1 2.9959 6.5449 0.1622 12 6 3.4449 3.6807 -0.0044 13 6 3.8194 2.6692 -0.8711 14 7 4.9538 2.8743 -1.7994 15 8 5.2814 1.9866 -2.5663 16 8 5.5598 3.9309 -1.7964 17 6 3.1341 1.4719 -0.8759 18 14 2.2596 -1.6177 -0.0007 19 6 4.0907 -1.2775 0.0460 20 6 1.7749 -2.6153 1.4961 21 6 1.8448 -2.5736 -1.5451 22 1 -0.5400 -0.9353 -0.0004 23 1 -0.5400 0.9353 0.0004 24 1 0.8692 2.1596 1.5558 25 1 2.0793 4.2483 2.8425 26 1 0.4886 5.3085 0.6573 27 1 3.9816 4.6180 -0.0081 28 1 3.4248 0.6847 -1.5556 29 1 4.3175 -0.6238 0.8882 30 1 4.6320 -2.2169 0.1593 31 1 4.3942 -0.7931 -0.8820 32 1 0.7036 -2.8143 1.4688 33 1 2.3202 -3.5591 1.4960 34 1 2.0176 -2.0561 2.3997 35 1 2.1284 -1.9899 -2.4208 36 1 2.3895 -3.5177 -1.5453 37 1 0.7735 -2.7726 -1.5724 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_271570_14761194_15738102.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 11:18:39 Heat of formation + Delta-G solvation = -35.343397 kcal Electronic energy + Delta-G solvation = -20109.480438 eV Core-core repulsion = 16979.016965 eV Total energy + Delta-G solvation = -3130.463473 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 281.104 amu Computer time = 0.46 seconds Orbital eigenvalues (eV) -43.14280 -41.05503 -38.09446 -37.48533 -35.53837 -33.41734 -31.37664 -29.71988 -28.58712 -28.52331 -27.62038 -27.20373 -24.57748 -22.91531 -21.09227 -19.62653 -19.57183 -18.46407 -18.14156 -17.89012 -16.82582 -16.81314 -16.42550 -15.69827 -15.20375 -14.90602 -14.35104 -14.15544 -14.08134 -14.02273 -13.62193 -13.58008 -13.44385 -13.33173 -13.24549 -13.11424 -12.63203 -12.50071 -12.36463 -12.14826 -12.04562 -11.95418 -11.75382 -11.26929 -11.04962 -10.90776 -10.69514 -10.53334 -9.85922 -1.21049 -0.50559 0.25243 0.37214 0.81946 0.90481 1.27076 1.33616 1.45995 1.66596 1.75166 1.85438 2.15672 2.39854 3.00329 3.09421 3.23907 3.52956 3.63478 3.67386 3.95416 4.06177 4.27658 4.44635 4.47237 4.57720 4.58723 4.61951 4.62462 4.63338 4.66647 4.71232 4.80954 4.94284 5.16770 5.33174 5.36102 5.41222 5.43085 5.47989 6.23798 6.67959 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.108 4.108 2 C -0.384 4.384 3 C -0.025 4.025 4 C -0.041 4.041 5 C -0.113 4.113 6 C -0.078 4.078 7 O -0.533 6.533 8 Si 0.933 3.067 9 H -0.243 1.243 10 H -0.244 1.244 11 H -0.245 1.245 12 C -0.074 4.074 13 C -0.031 4.031 14 N 0.026 4.974 15 O -0.150 6.150 16 O -0.159 6.159 17 C -0.053 4.053 18 Si 1.050 2.950 19 C -0.454 4.454 20 C -0.447 4.447 21 C -0.449 4.449 22 H 0.112 0.888 23 H 0.099 0.901 24 H 0.148 0.852 25 H 0.128 0.872 26 H 0.379 0.621 27 H 0.149 0.851 28 H 0.160 0.840 29 H 0.068 0.932 30 H 0.075 0.925 31 H 0.072 0.928 32 H 0.070 0.930 33 H 0.074 0.926 34 H 0.070 0.930 35 H 0.072 0.928 36 H 0.074 0.926 37 H 0.070 0.930 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.167 -2.310 2.644 5.449 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.144 4.144 2 C -0.424 4.424 3 C -0.025 4.025 4 C -0.059 4.059 5 C -0.114 4.114 6 C -0.189 4.189 7 O -0.338 6.338 8 Si 0.754 3.246 9 H -0.166 1.166 10 H -0.167 1.167 11 H -0.168 1.168 12 C -0.093 4.093 13 C -0.114 4.114 14 N 0.547 4.453 15 O -0.368 6.368 16 O -0.374 6.374 17 C -0.071 4.071 18 Si 1.242 2.758 19 C -0.562 4.562 20 C -0.555 4.555 21 C -0.557 4.557 22 H 0.130 0.870 23 H 0.117 0.883 24 H 0.166 0.834 25 H 0.146 0.854 26 H 0.227 0.773 27 H 0.166 0.834 28 H 0.177 0.823 29 H 0.087 0.913 30 H 0.095 0.905 31 H 0.091 0.909 32 H 0.089 0.911 33 H 0.093 0.907 34 H 0.090 0.910 35 H 0.091 0.909 36 H 0.093 0.907 37 H 0.089 0.911 Dipole moment (debyes) X Y Z Total from point charges -4.279 -1.789 3.596 5.869 hybrid contribution 0.100 -0.020 -0.775 0.782 sum -4.179 -1.809 2.821 5.356 Atomic orbital electron populations 1.24373 0.95173 1.02582 0.92278 1.27980 1.01202 1.07152 1.06079 1.18967 0.94415 0.94532 0.94633 1.21678 0.97462 0.90415 0.96369 1.20293 0.95827 0.97442 0.97880 1.24989 0.91209 1.01507 1.01149 1.86545 1.25065 1.85858 1.36352 0.85872 0.78710 0.77767 0.82211 1.16636 1.16693 1.16811 1.20951 0.96566 0.98729 0.93065 1.20875 0.93679 0.98549 0.98267 1.43598 1.01132 1.00284 1.00327 1.94561 1.70443 1.36735 1.35077 1.94569 1.53214 1.14814 1.74845 1.21270 0.92829 0.95249 0.97798 0.78365 0.66102 0.63303 0.68062 1.26302 1.19779 1.05470 1.04660 1.26101 1.05699 1.09070 1.14614 1.26126 1.05446 1.08813 1.15273 0.87007 0.88314 0.83390 0.85386 0.77345 0.83375 0.82289 0.91284 0.90540 0.90869 0.91067 0.90726 0.91035 0.90909 0.90677 0.91072 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 0.36 13.31 28.82 0.38 0.74 16 2 C -0.38 1.02 4.41 -37.57 -0.17 0.85 16 3 C -0.02 0.03 5.25 -105.01 -0.55 -0.52 16 4 C -0.04 0.07 8.89 -39.20 -0.35 -0.28 16 5 C -0.11 0.14 5.38 -104.68 -0.56 -0.42 16 6 C -0.08 0.18 2.82 36.01 0.10 0.28 16 7 O -0.53 0.97 12.76 -35.23 -0.45 0.52 16 8 Si 0.93 -1.26 25.07 -169.99 -4.26 -5.52 16 9 H -0.24 0.04 7.11 56.52 0.40 0.44 16 10 H -0.24 0.10 7.11 56.52 0.40 0.50 16 11 H -0.24 0.19 7.11 56.52 0.40 0.59 16 12 C -0.07 -0.04 8.18 -39.50 -0.32 -0.36 16 13 C -0.03 -0.06 6.84 -80.01 -0.55 -0.60 16 14 N 0.03 0.12 4.45 33.93 0.15 0.27 16 15 O -0.15 -0.76 18.44 -29.46 -0.54 -1.30 16 16 O -0.16 -0.88 18.44 -29.46 -0.54 -1.42 16 17 C -0.05 0.00 7.72 -39.20 -0.30 -0.31 16 18 Si 1.05 -3.73 11.67 -169.99 -1.98 -5.71 16 19 C -0.45 0.84 7.69 101.05 0.78 1.62 16 20 C -0.45 1.26 8.65 101.05 0.87 2.13 16 21 C -0.45 1.19 8.65 101.05 0.87 2.07 16 22 H 0.11 -0.54 7.72 -52.49 -0.41 -0.95 16 23 H 0.10 -0.34 7.84 -52.49 -0.41 -0.75 16 24 H 0.15 -0.44 7.94 -52.48 -0.42 -0.86 16 25 H 0.13 -0.45 7.96 -51.93 -0.41 -0.87 16 26 H 0.38 -1.80 8.70 45.56 0.40 -1.41 16 27 H 0.15 0.03 4.40 -52.48 -0.23 -0.20 16 28 H 0.16 -0.15 5.46 -52.49 -0.29 -0.43 16 29 H 0.07 -0.09 7.96 -51.93 -0.41 -0.51 16 30 H 0.08 -0.15 7.96 -51.93 -0.41 -0.57 16 31 H 0.07 -0.10 6.23 -51.93 -0.32 -0.43 16 32 H 0.07 -0.22 7.96 -51.93 -0.41 -0.64 16 33 H 0.07 -0.20 7.96 -51.93 -0.41 -0.61 16 34 H 0.07 -0.18 7.96 -51.93 -0.41 -0.59 16 35 H 0.07 -0.17 7.96 -51.93 -0.41 -0.58 16 36 H 0.07 -0.19 7.96 -51.93 -0.41 -0.61 16 37 H 0.07 -0.21 7.96 -51.93 -0.41 -0.62 16 LS Contribution 319.93 15.07 4.82 4.82 Total: 0.00 -5.43 319.93 -6.80 -12.23 By element: Atomic # 1 Polarization: -4.88 SS G_CDS: -4.20 Total: -9.08 kcal Atomic # 6 Polarization: 4.99 SS G_CDS: 0.21 Total: 5.20 kcal Atomic # 7 Polarization: 0.12 SS G_CDS: 0.15 Total: 0.27 kcal Atomic # 8 Polarization: -0.67 SS G_CDS: -1.54 Total: -2.20 kcal Atomic # 14 Polarization: -4.99 SS G_CDS: -6.25 Total: -11.23 kcal Total LS contribution 4.82 Total: 4.82 kcal Total: -5.43 -6.80 -12.23 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_271570_14761194_15738102.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -23.116 kcal (2) G-P(sol) polarization free energy of solvation -5.431 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -28.547 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.796 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -12.227 kcal (6) G-S(sol) free energy of system = (1) + (5) -35.343 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.46 seconds