Wall clock time and date at job start Mon Mar 8 2021 11:37:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.32583 * 1 3 3 C 1.47790 * 120.00185 * 2 1 4 4 C 1.39443 * 120.12826 * 114.60445 * 3 2 1 5 5 C 1.38469 * 119.82420 * 179.97438 * 4 3 2 6 6 O 1.35949 * 119.95847 * 180.02562 * 5 4 3 7 7 C 1.38790 * 120.08068 * 0.02562 * 5 4 3 8 8 C 1.50702 * 119.86951 * 179.97438 * 7 5 4 9 9 O 1.42908 * 109.46890 * 285.00032 * 8 7 5 10 10 Si 1.86298 * 109.47402 * 165.00253 * 8 7 5 11 11 H 1.48506 * 109.46886 * 299.99701 * 10 8 7 12 12 H 1.48493 * 109.47064 * 59.99414 * 10 8 7 13 13 H 1.48502 * 109.47257 * 180.02562 * 10 8 7 14 14 C 1.38261 * 120.26187 * 359.97438 * 7 5 4 15 15 C 1.38195 * 120.17004 * 359.97438 * 14 7 5 16 16 F 1.35102 * 120.03941 * 179.97438 * 15 14 7 17 17 Si 1.86805 * 120.00042 * 179.97438 * 2 1 3 18 18 C 1.86295 * 109.47091 * 275.09094 * 17 2 1 19 19 C 1.86301 * 109.46932 * 35.09354 * 17 2 1 20 20 C 1.86305 * 109.46866 * 155.09233 * 17 2 1 21 21 H 1.07996 * 119.99579 * 185.05000 * 1 2 3 22 22 H 1.08000 * 120.00174 * 5.05312 * 1 2 3 23 23 H 1.07996 * 120.09010 * 0.25009 * 4 3 2 24 24 H 0.96708 * 114.00581 * 89.99412 * 6 5 4 25 25 H 1.09001 * 109.47140 * 44.99901 * 8 7 5 26 26 H 0.96705 * 114.00029 * 179.97438 * 9 8 7 27 27 H 1.07999 * 119.91556 * 180.02562 * 14 7 5 28 28 H 1.09003 * 109.46894 * 60.00173 * 18 17 2 29 29 H 1.09002 * 109.47188 * 179.97438 * 18 17 2 30 30 H 1.08996 * 109.47723 * 300.00137 * 18 17 2 31 31 H 1.08996 * 109.46798 * 59.99830 * 19 17 2 32 32 H 1.08997 * 109.46828 * 180.02562 * 19 17 2 33 33 H 1.08998 * 109.46897 * 300.00202 * 19 17 2 34 34 H 1.08999 * 109.46858 * 55.11348 * 20 17 2 35 35 H 1.09004 * 109.46825 * 175.11373 * 20 17 2 36 36 H 1.08999 * 109.47055 * 295.11266 * 20 17 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.3258 0.0000 0.0000 3 6 2.0648 1.2799 0.0000 4 6 2.8497 1.6349 1.0965 5 6 3.5398 2.8353 1.0896 6 8 4.3062 3.1840 2.1570 7 6 3.4501 3.6830 -0.0056 8 6 4.2028 4.9886 -0.0079 9 8 3.5419 5.9209 0.8504 10 14 4.2577 5.6709 -1.7405 11 1 4.9445 4.7022 -2.6324 12 1 2.8733 5.8968 -2.2277 13 1 5.0000 6.9571 -1.7428 14 6 2.6729 3.3344 -1.0947 15 6 1.9805 2.1385 -1.0995 16 9 1.2215 1.8007 -2.1649 17 14 2.2599 -1.6178 0.0007 18 6 2.4354 -2.2327 1.7505 19 6 1.3257 -2.8746 -1.0085 20 6 3.9500 -1.3593 -0.7392 21 1 -0.5399 -0.9317 0.0823 22 1 -0.5400 0.9317 -0.0824 23 1 2.9226 0.9734 1.9471 24 1 5.2233 2.8829 2.0980 25 1 5.2190 4.8228 0.3498 26 1 3.9727 6.7854 0.8980 27 1 2.6075 3.9981 -1.9442 28 1 1.4465 -2.3839 2.1833 29 1 2.9800 -3.1769 1.7509 30 1 2.9819 -1.4974 2.3410 31 1 1.2231 -2.5147 -2.0322 32 1 1.8705 -3.8186 -1.0077 33 1 0.3369 -3.0257 -0.5757 34 1 4.4639 -0.5623 -0.2017 35 1 4.5262 -2.2812 -0.6599 36 1 3.8488 -1.0832 -1.7887 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_271570_14761194_16463738.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 11:37:01 Heat of formation + Delta-G solvation = -119.934789 kcal Electronic energy + Delta-G solvation = -19001.937370 eV Core-core repulsion = 15910.686007 eV Total energy + Delta-G solvation = -3091.251363 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 270.100 amu Computer time = 0.35 seconds Orbital eigenvalues (eV) -49.76377 -40.97466 -37.74168 -37.68611 -34.93996 -31.74007 -30.35976 -29.56782 -28.48530 -28.45523 -26.70835 -23.94060 -22.99122 -21.01442 -18.97996 -18.54587 -18.22314 -17.76409 -16.66450 -16.54594 -16.04840 -15.77815 -15.20726 -15.07278 -14.79106 -14.48078 -14.23667 -14.05793 -13.95844 -13.78647 -13.47082 -13.36211 -13.29267 -13.14551 -13.08642 -12.84240 -12.53800 -12.18283 -11.88522 -11.73008 -11.31931 -10.96459 -10.93286 -10.36082 -10.30935 -9.83672 -9.31101 -0.11879 0.06315 0.94105 1.05707 1.36923 1.42381 1.64510 1.81099 1.83604 2.02806 2.33099 2.56711 3.07065 3.16503 3.48450 3.66137 3.77051 3.89060 4.12500 4.34987 4.59467 4.66689 4.67722 4.69088 4.71663 4.72566 4.73497 4.74875 4.83206 4.87911 5.10112 5.20943 5.33174 5.41497 5.50106 5.50499 5.60660 5.75339 6.56085 6.65377 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.109 4.109 2 C -0.383 4.383 3 C -0.039 4.039 4 C -0.119 4.119 5 C 0.132 3.868 6 O -0.485 6.485 7 C -0.085 4.085 8 C -0.070 4.070 9 O -0.537 6.537 10 Si 0.937 3.063 11 H -0.246 1.246 12 H -0.247 1.247 13 H -0.252 1.252 14 C -0.139 4.139 15 C 0.094 3.906 16 F -0.131 7.131 17 Si 1.052 2.948 18 C -0.447 4.447 19 C -0.449 4.449 20 C -0.446 4.446 21 H 0.110 0.890 22 H 0.095 0.905 23 H 0.144 0.856 24 H 0.390 0.610 25 H 0.076 0.924 26 H 0.380 0.620 27 H 0.139 0.861 28 H 0.070 0.930 29 H 0.072 0.928 30 H 0.070 0.930 31 H 0.071 0.929 32 H 0.073 0.927 33 H 0.070 0.930 34 H 0.069 0.931 35 H 0.071 0.929 36 H 0.069 0.931 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.077 -1.454 0.236 3.412 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.146 4.146 2 C -0.424 4.424 3 C -0.040 4.040 4 C -0.137 4.137 5 C 0.087 3.913 6 O -0.295 6.295 7 C -0.086 4.086 8 C -0.181 4.181 9 O -0.342 6.342 10 Si 0.759 3.241 11 H -0.170 1.170 12 H -0.170 1.170 13 H -0.175 1.175 14 C -0.158 4.158 15 C 0.074 3.926 16 F -0.110 7.110 17 Si 1.243 2.757 18 C -0.554 4.554 19 C -0.557 4.557 20 C -0.554 4.554 21 H 0.128 0.872 22 H 0.113 0.887 23 H 0.162 0.838 24 H 0.247 0.753 25 H 0.094 0.906 26 H 0.227 0.773 27 H 0.156 0.844 28 H 0.089 0.911 29 H 0.091 0.909 30 H 0.089 0.911 31 H 0.090 0.910 32 H 0.092 0.908 33 H 0.089 0.911 34 H 0.088 0.912 35 H 0.091 0.909 36 H 0.089 0.911 Dipole moment (debyes) X Y Z Total from point charges 2.118 -1.310 -0.363 2.516 hybrid contribution 0.500 0.284 -0.014 0.575 sum 2.617 -1.026 -0.377 2.836 Atomic orbital electron populations 1.24296 0.95324 1.02204 0.92744 1.27901 1.01053 1.07341 1.06075 1.18879 0.98151 0.94332 0.92599 1.21384 0.97890 0.96342 0.98132 1.18067 0.95179 0.91883 0.86211 1.84914 1.25335 1.79626 1.39576 1.19412 0.99793 0.95976 0.93384 1.24523 0.97276 0.90108 1.06187 1.86565 1.54200 1.25475 1.68004 0.85893 0.81607 0.80966 0.75589 1.16950 1.17021 1.17544 1.20906 0.98343 0.96570 0.99957 1.17583 0.95160 0.94425 0.85395 1.91510 1.73382 1.92316 1.53772 0.78328 0.66320 0.63182 0.67840 1.26109 1.04810 1.06214 1.18295 1.26134 1.08497 1.11616 1.09410 1.26079 1.17377 1.04805 1.07172 0.87227 0.88708 0.83784 0.75344 0.90596 0.77306 0.84355 0.91056 0.90920 0.91116 0.90970 0.90807 0.91123 0.91182 0.90945 0.91143 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 0.00 13.38 28.83 0.39 0.38 16 2 C -0.38 -0.06 3.90 -37.58 -0.15 -0.20 16 3 C -0.04 -0.06 4.91 -104.97 -0.52 -0.58 16 4 C -0.12 -0.11 9.35 -39.05 -0.36 -0.47 16 5 C 0.13 0.20 6.67 -39.29 -0.26 -0.07 16 6 O -0.48 -0.23 12.81 -19.58 -0.25 -0.48 16 7 C -0.08 -0.16 5.31 -104.41 -0.55 -0.71 16 8 C -0.07 0.00 2.36 36.01 0.08 0.08 16 9 O -0.54 -0.62 12.86 -35.23 -0.45 -1.08 16 10 Si 0.94 -0.34 25.48 -169.99 -4.33 -4.67 16 11 H -0.25 -0.03 7.11 56.52 0.40 0.37 16 12 H -0.25 -0.28 6.73 56.52 0.38 0.10 16 13 H -0.25 0.12 7.11 56.52 0.40 0.52 16 14 C -0.14 -0.33 8.62 -39.59 -0.34 -0.67 16 15 C 0.09 0.27 7.23 -39.03 -0.28 -0.02 16 16 F -0.13 -0.48 16.64 2.25 0.04 -0.45 16 17 Si 1.05 -2.22 12.09 -169.99 -2.05 -4.28 16 18 C -0.45 0.82 8.65 101.05 0.87 1.70 16 19 C -0.45 0.66 8.65 101.05 0.87 1.54 16 20 C -0.45 0.56 8.65 101.05 0.87 1.43 16 21 H 0.11 -0.23 7.59 -52.49 -0.40 -0.63 16 22 H 0.09 0.08 8.05 -52.49 -0.42 -0.35 16 23 H 0.14 -0.13 8.06 -52.49 -0.42 -0.55 16 24 H 0.39 -1.76 9.07 45.56 0.41 -1.35 16 25 H 0.08 -0.17 7.82 -51.93 -0.41 -0.58 16 26 H 0.38 -1.30 8.74 45.56 0.40 -0.90 16 27 H 0.14 0.19 4.86 -52.49 -0.26 -0.07 16 28 H 0.07 -0.12 7.96 -51.93 -0.41 -0.54 16 29 H 0.07 -0.15 7.96 -51.93 -0.41 -0.56 16 30 H 0.07 -0.14 7.96 -51.93 -0.41 -0.55 16 31 H 0.07 -0.07 7.96 -51.93 -0.41 -0.48 16 32 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 33 H 0.07 -0.13 7.83 -51.93 -0.41 -0.53 16 34 H 0.07 -0.09 7.96 -51.93 -0.41 -0.50 16 35 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 36 H 0.07 -0.04 7.96 -51.93 -0.41 -0.46 16 LS Contribution 314.20 15.07 4.73 4.73 Total: 0.00 -6.60 314.20 -5.32 -11.92 By element: Atomic # 1 Polarization: -4.49 SS G_CDS: -3.63 Total: -8.12 kcal Atomic # 6 Polarization: 1.79 SS G_CDS: 0.63 Total: 2.42 kcal Atomic # 8 Polarization: -0.86 SS G_CDS: -0.70 Total: -1.56 kcal Atomic # 9 Polarization: -0.48 SS G_CDS: 0.04 Total: -0.45 kcal Atomic # 14 Polarization: -2.56 SS G_CDS: -6.39 Total: -8.95 kcal Total LS contribution 4.73 Total: 4.73 kcal Total: -6.60 -5.32 -11.92 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_271570_14761194_16463738.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -108.016 kcal (2) G-P(sol) polarization free energy of solvation -6.603 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -114.619 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.316 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -11.919 kcal (6) G-S(sol) free energy of system = (1) + (5) -119.935 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.35 seconds