Wall clock time and date at job start Mon Mar 8 2021 11:56:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.32552 * 1 3 3 C 1.47823 * 120.00465 * 2 1 4 4 C 1.39258 * 120.07114 * 245.67458 * 3 2 1 5 5 C 1.39422 * 119.70433 * 179.97438 * 4 3 2 6 6 C 1.43196 * 120.08602 * 180.02562 * 5 4 3 7 7 N 5.94647 * 127.88450 * 318.53449 * 2 1 3 8 8 C 1.39686 * 119.83222 * 359.97438 * 5 4 3 9 9 C 1.38073 * 120.13594 * 359.73534 * 8 5 4 10 10 C 1.38068 * 120.30341 * 0.54308 * 9 8 5 11 11 C 1.50706 * 119.92259 * 179.72532 * 10 9 8 12 12 O 1.42903 * 109.47104 * 255.31098 * 11 10 9 13 13 Si 1.86301 * 109.46776 * 15.30930 * 11 10 9 14 14 H 1.48506 * 109.47034 * 60.00255 * 13 11 10 15 15 H 1.48495 * 109.46895 * 179.97438 * 13 11 10 16 16 H 1.48502 * 109.47140 * 299.99989 * 13 11 10 17 17 Si 1.86808 * 119.99511 * 180.02562 * 2 1 3 18 18 C 1.86295 * 109.47073 * 265.02879 * 17 2 1 19 19 C 1.86295 * 109.47081 * 25.02702 * 17 2 1 20 20 C 1.86298 * 109.46862 * 145.02850 * 17 2 1 21 21 H 1.08005 * 119.99492 * 5.04793 * 1 2 3 22 22 H 1.08002 * 120.00703 * 185.05432 * 1 2 3 23 23 H 1.07997 * 120.14865 * 359.95201 * 4 3 2 24 24 H 1.07998 * 119.93319 * 180.02562 * 8 5 4 25 25 H 1.08005 * 119.85145 * 180.28967 * 9 8 5 26 26 H 1.08997 * 109.47214 * 135.30842 * 11 10 9 27 27 H 0.96700 * 114.00013 * 60.00135 * 12 11 10 28 28 H 1.09003 * 109.47454 * 59.99681 * 18 17 2 29 29 H 1.08997 * 109.47236 * 180.02562 * 18 17 2 30 30 H 1.09004 * 109.47190 * 299.99956 * 18 17 2 31 31 H 1.08998 * 109.47400 * 60.00273 * 19 17 2 32 32 H 1.09004 * 109.47181 * 179.97438 * 19 17 2 33 33 H 1.09000 * 109.47352 * 299.99863 * 19 17 2 34 34 H 1.08994 * 109.47284 * 64.98358 * 20 17 2 35 35 H 1.09005 * 109.46760 * 184.98281 * 20 17 2 36 36 H 1.08997 * 109.47179 * 304.97624 * 20 17 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.3255 0.0000 0.0000 3 6 2.0647 1.2801 0.0000 4 6 2.8436 1.6362 -1.0982 5 6 3.5372 2.8456 -1.0902 6 6 4.3400 3.2201 -2.2153 7 7 4.9771 3.5169 -3.1077 8 6 3.4461 3.6916 0.0175 9 6 2.6671 3.3347 1.1002 10 6 1.9824 2.1357 1.1007 11 6 1.1396 1.7518 2.2897 12 8 1.8177 0.7503 3.0508 13 14 0.8499 3.2520 3.3557 14 1 0.1452 4.2927 2.5647 15 1 0.0189 2.8739 4.5268 16 1 2.1541 3.7852 3.8249 17 14 2.2594 -1.6179 -0.0007 18 6 2.7017 -2.0804 1.7489 19 6 1.1915 -2.9510 -0.7444 20 6 3.8164 -1.4356 -1.0074 21 1 -0.5399 0.9318 -0.0823 22 1 -0.5401 -0.9316 0.0824 23 1 2.9103 0.9782 -1.9520 24 1 3.9823 4.6290 0.0252 25 1 2.5963 3.9945 1.9524 26 1 0.1824 1.3605 1.9453 27 1 2.6790 1.0301 3.3900 28 1 1.7907 -2.1869 2.3379 29 1 3.2470 -3.0241 1.7484 30 1 3.3265 -1.3004 2.1840 31 1 0.9327 -2.6805 -1.7680 32 1 1.7366 -3.8949 -0.7452 33 1 0.2806 -3.0576 -0.1554 34 1 4.4802 -0.7194 -0.5234 35 1 4.3161 -2.4015 -1.0817 36 1 3.5637 -1.0796 -2.0061 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_271570_14761194_16735462.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 11:56:41 Heat of formation + Delta-G solvation = 3.297309 kcal Electronic energy + Delta-G solvation = -17506.659795 eV Core-core repulsion = 14887.010152 eV Total energy + Delta-G solvation = -2619.649643 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 261.105 amu Computer time = 0.43 seconds Orbital eigenvalues (eV) -40.89761 -38.12583 -37.09256 -34.93273 -32.84310 -30.72441 -29.33751 -28.19042 -28.15390 -27.43245 -24.11677 -23.19809 -21.48829 -18.78324 -18.23984 -17.03877 -16.67675 -15.95041 -15.79939 -15.32200 -15.14205 -14.89913 -14.55655 -14.31953 -14.04218 -13.91936 -13.80273 -13.66765 -13.40472 -13.18099 -13.10211 -13.07215 -12.95107 -12.83527 -12.50648 -12.11257 -12.05687 -11.63363 -11.00494 -10.82850 -10.71455 -10.27494 -10.14316 -9.97819 -9.35729 -0.34076 0.21539 1.16304 1.25153 1.48541 1.54026 1.58575 1.76299 1.98378 2.02731 2.08202 2.33834 2.72720 2.78088 2.87635 3.62348 3.75970 3.85232 3.91821 4.22211 4.37622 4.59363 4.75113 4.83274 4.86294 4.88345 4.90679 4.91714 5.00676 5.05814 5.07311 5.10266 5.23245 5.40462 5.50479 5.62675 5.69672 5.78460 5.84560 5.92385 6.36783 6.84728 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.126 4.126 2 C -0.376 4.376 3 C -0.010 4.010 4 C -0.072 4.072 5 C -0.033 4.033 6 C 0.276 3.724 7 N -0.466 5.466 8 C -0.069 4.069 9 C -0.126 4.126 10 C -0.087 4.087 11 C -0.077 4.077 12 O -0.535 6.535 13 Si 0.964 3.036 14 H -0.260 1.260 15 H -0.278 1.278 16 H -0.241 1.241 17 Si 1.105 2.895 18 C -0.448 4.448 19 C -0.462 4.462 20 C -0.464 4.464 21 H 0.097 0.903 22 H 0.119 0.881 23 H 0.143 0.857 24 H 0.149 0.851 25 H 0.148 0.852 26 H 0.124 0.876 27 H 0.387 0.613 28 H 0.068 0.932 29 H 0.061 0.939 30 H 0.071 0.929 31 H 0.069 0.931 32 H 0.069 0.931 33 H 0.073 0.927 34 H 0.067 0.933 35 H 0.069 0.931 36 H 0.068 0.932 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.904 -1.480 4.244 5.351 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.162 4.162 2 C -0.416 4.416 3 C -0.011 4.011 4 C -0.092 4.092 5 C -0.036 4.036 6 C -0.038 4.038 7 N -0.142 5.142 8 C -0.089 4.089 9 C -0.144 4.144 10 C -0.088 4.088 11 C -0.188 4.188 12 O -0.342 6.342 13 Si 0.789 3.211 14 H -0.184 1.184 15 H -0.203 1.203 16 H -0.165 1.165 17 Si 1.293 2.707 18 C -0.555 4.555 19 C -0.569 4.569 20 C -0.571 4.571 21 H 0.115 0.885 22 H 0.137 0.863 23 H 0.161 0.839 24 H 0.167 0.833 25 H 0.165 0.835 26 H 0.142 0.858 27 H 0.236 0.764 28 H 0.087 0.913 29 H 0.080 0.920 30 H 0.091 0.909 31 H 0.089 0.911 32 H 0.089 0.911 33 H 0.093 0.907 34 H 0.086 0.914 35 H 0.088 0.912 36 H 0.087 0.913 Dipole moment (debyes) X Y Z Total from point charges -2.611 -0.557 3.228 4.189 hybrid contribution 0.372 0.104 -0.079 0.394 sum -2.239 -0.454 3.149 3.891 Atomic orbital electron populations 1.24399 0.95276 1.02799 0.93746 1.27927 1.01232 1.07409 1.05073 1.18768 0.96094 0.94108 0.92088 1.21490 0.94443 0.94395 0.98898 1.15998 0.99798 0.97546 0.90262 1.26035 0.92564 0.92480 0.92760 1.81322 1.11427 1.09469 1.11993 1.21303 0.97334 0.99173 0.91078 1.21163 0.97328 0.96636 0.99237 1.20782 0.97748 0.93787 0.96487 1.25015 0.98367 1.02129 0.93290 1.86555 1.37391 1.39741 1.70488 0.85497 0.81054 0.75902 0.78617 1.18363 1.20321 1.16462 0.77484 0.64522 0.62291 0.66415 1.26140 1.05395 1.04778 1.19166 1.26304 1.10291 1.13013 1.07296 1.26377 1.16716 1.04624 1.09355 0.88493 0.86283 0.83890 0.83291 0.83470 0.85814 0.76410 0.91329 0.91979 0.90935 0.91137 0.91137 0.90746 0.91394 0.91158 0.91320 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 0.72 11.80 66.67 0.79 1.51 16 2 C -0.38 1.78 3.53 23.66 0.08 1.87 16 3 C -0.01 0.03 4.90 -20.15 -0.10 -0.06 16 4 C -0.07 0.15 8.56 22.80 0.20 0.35 16 5 C -0.03 0.02 5.73 -21.40 -0.12 -0.10 16 6 C 0.28 1.37 15.32 88.33 1.35 2.73 16 7 N -0.47 -5.20 18.54 19.00 0.35 -4.84 16 8 C -0.07 0.26 9.74 22.58 0.22 0.48 16 9 C -0.13 0.65 8.63 22.19 0.19 0.84 16 10 C -0.09 0.38 5.28 -19.56 -0.10 0.27 16 11 C -0.08 0.42 2.11 71.24 0.15 0.57 16 12 O -0.54 2.81 12.72 -148.98 -1.89 0.91 16 13 Si 0.96 -4.54 25.50 68.60 1.75 -2.79 16 14 H -0.26 0.73 7.11 99.48 0.71 1.44 16 15 H -0.28 0.06 7.11 99.48 0.71 0.76 16 16 H -0.24 1.47 6.72 99.48 0.67 2.14 16 17 Si 1.11 -6.62 12.28 68.60 0.84 -5.78 16 18 C -0.45 1.55 8.65 113.37 0.98 2.54 16 19 C -0.46 2.16 8.42 113.37 0.96 3.12 16 20 C -0.46 1.60 7.72 113.37 0.88 2.48 16 21 H 0.10 -0.60 7.87 -2.91 -0.02 -0.63 16 22 H 0.12 -0.98 7.19 -2.91 -0.02 -1.00 16 23 H 0.14 -0.53 6.98 -2.91 -0.02 -0.55 16 24 H 0.15 -1.03 8.06 -2.91 -0.02 -1.05 16 25 H 0.15 -1.22 4.86 -2.91 -0.01 -1.23 16 26 H 0.12 -0.75 5.83 -2.39 -0.01 -0.76 16 27 H 0.39 -4.33 8.70 -74.06 -0.64 -4.98 16 28 H 0.07 -0.17 7.96 -2.39 -0.02 -0.18 16 29 H 0.06 -0.19 7.96 -2.39 -0.02 -0.21 16 30 H 0.07 -0.24 7.83 -2.38 -0.02 -0.26 16 31 H 0.07 -0.32 7.96 -2.39 -0.02 -0.34 16 32 H 0.07 -0.29 7.96 -2.38 -0.02 -0.31 16 33 H 0.07 -0.40 7.62 -2.39 -0.02 -0.41 16 34 H 0.07 -0.18 7.96 -2.39 -0.02 -0.20 16 35 H 0.07 -0.22 7.96 -2.38 -0.02 -0.24 16 36 H 0.07 -0.24 7.20 -2.39 -0.02 -0.26 16 Total: 0.00 -11.87 310.29 7.67 -4.19 By element: Atomic # 1 Polarization: -9.42 SS G_CDS: 1.15 Total: -8.27 kcal Atomic # 6 Polarization: 11.11 SS G_CDS: 5.47 Total: 16.58 kcal Atomic # 7 Polarization: -5.20 SS G_CDS: 0.35 Total: -4.84 kcal Atomic # 8 Polarization: 2.81 SS G_CDS: -1.89 Total: 0.91 kcal Atomic # 14 Polarization: -11.17 SS G_CDS: 2.59 Total: -8.57 kcal Total: -11.87 7.67 -4.19 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_271570_14761194_16735462.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 7.490 kcal (2) G-P(sol) polarization free energy of solvation -11.865 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -4.375 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 7.672 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -4.193 kcal (6) G-S(sol) free energy of system = (1) + (5) 3.297 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.43 seconds