Wall clock time and date at job start Mon Mar 8 2021 11:58:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.32706 * 1 3 3 C 1.47640 * 119.99989 * 2 1 4 4 C 1.39739 * 119.97936 * 313.27925 * 3 2 1 5 5 C 1.36609 * 120.01664 * 180.27930 * 4 3 2 6 6 C 1.39885 * 119.98009 * 359.42520 * 5 4 3 7 7 C 1.47349 * 120.01809 * 180.25463 * 6 5 4 8 8 O 1.22326 * 119.99967 * 355.60140 * 7 6 5 9 9 O 1.22320 * 120.00229 * 175.59555 * 7 6 5 10 10 C 1.39917 * 119.96718 * 0.28439 * 6 5 4 11 11 C 1.50698 * 120.01159 * 179.97438 * 10 6 5 12 12 O 1.42903 * 109.47115 * 196.46288 * 11 10 6 13 13 Si 1.86296 * 109.47415 * 76.45952 * 11 10 6 14 14 H 1.48503 * 109.47027 * 67.04300 * 13 11 10 15 15 H 1.48496 * 109.47202 * 187.04426 * 13 11 10 16 16 H 1.48499 * 109.47231 * 307.04305 * 13 11 10 17 17 C 1.36582 * 119.98035 * 359.97438 * 10 6 5 18 18 Si 1.86802 * 120.00075 * 179.97438 * 2 1 3 19 19 C 1.86296 * 109.46970 * 265.52653 * 18 2 1 20 20 C 1.86296 * 109.47134 * 25.52912 * 18 2 1 21 21 C 1.86298 * 109.46892 * 145.52621 * 18 2 1 22 22 H 1.08000 * 119.99931 * 179.97438 * 1 2 3 23 23 H 1.07995 * 120.00483 * 0.02562 * 1 2 3 24 24 H 1.07999 * 119.99088 * 0.02562 * 4 3 2 25 25 H 1.07999 * 120.01167 * 179.70334 * 5 4 3 26 26 H 1.08994 * 109.47116 * 316.45589 * 11 10 6 27 27 H 0.96698 * 114.00210 * 59.99212 * 12 11 10 28 28 H 1.07997 * 119.99343 * 180.02562 * 17 10 6 29 29 H 1.08998 * 109.47363 * 59.99998 * 19 18 2 30 30 H 1.09001 * 109.46869 * 179.97438 * 19 18 2 31 31 H 1.09001 * 109.47553 * 299.99697 * 19 18 2 32 32 H 1.09000 * 109.47389 * 59.99785 * 20 18 2 33 33 H 1.09001 * 109.47328 * 179.97438 * 20 18 2 34 34 H 1.09004 * 109.47212 * 299.99780 * 20 18 2 35 35 H 1.09004 * 109.47359 * 65.42216 * 21 18 2 36 36 H 1.09006 * 109.47157 * 185.41581 * 21 18 2 37 37 H 1.09003 * 109.47572 * 305.42041 * 21 18 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.3271 0.0000 0.0000 3 6 2.0653 1.2786 0.0000 4 6 1.6957 2.2982 -0.8812 5 6 2.3819 3.4795 -0.8858 6 6 3.4469 3.6727 0.0002 7 6 4.1840 4.9486 -0.0002 8 8 3.9179 5.8084 -0.8286 9 8 5.0619 5.1480 0.8279 10 6 3.8124 2.6535 0.8865 11 6 4.9600 2.8603 1.8410 12 8 5.3860 1.5967 2.3547 13 14 4.4086 3.9490 3.2486 14 1 3.3994 3.2283 4.0657 15 1 5.5783 4.2923 4.0965 16 1 3.8083 5.1940 2.7057 17 6 3.1288 1.4711 0.8862 18 14 2.2611 -1.6177 0.0007 19 6 2.6902 -2.0862 1.7520 20 6 1.1990 -2.9484 -0.7556 21 6 3.8256 -1.4319 -0.9936 22 1 -0.5400 -0.9353 -0.0004 23 1 -0.5401 0.9352 -0.0004 24 1 0.8701 2.1508 -1.5616 25 1 2.0993 4.2657 -1.5702 26 1 5.7879 3.3367 1.3161 27 1 5.6875 0.9775 1.6759 28 1 3.4105 0.6845 1.5704 29 1 1.7749 -2.1949 2.3338 30 1 3.2348 -3.0304 1.7524 31 1 3.3117 -1.3077 2.1946 32 1 0.9479 -2.6742 -1.7803 33 1 1.7442 -3.8922 -0.7557 34 1 0.2836 -3.0571 -0.1739 35 1 4.4890 -0.7231 -0.4980 36 1 4.3220 -2.3990 -1.0740 37 1 3.5812 -1.0649 -1.9904 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_271570_14761194_18352972.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 11:58:07 Heat of formation + Delta-G solvation = -176.610128 kcal Electronic energy + Delta-G solvation = -19963.662771 eV Core-core repulsion = 16906.155163 eV Total energy + Delta-G solvation = -3057.507608 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 279.101 amu Computer time = 0.53 seconds Orbital eigenvalues (eV) -39.18497 -36.73304 -36.04279 -33.29871 -32.57070 -30.44383 -29.21123 -28.63726 -27.50285 -27.35054 -25.01909 -23.01215 -20.94077 -19.13399 -18.39487 -16.71439 -15.65285 -15.11236 -14.64557 -14.34257 -13.97936 -13.52769 -13.36745 -13.26383 -13.13496 -13.09847 -12.80114 -12.72891 -12.47755 -12.38150 -12.33058 -12.25389 -12.12950 -11.83597 -11.29161 -10.77981 -10.48354 -10.31572 -10.15381 -9.98507 -9.81478 -9.65289 -9.48456 -9.17206 -8.01432 -7.69001 -7.54118 -7.39764 -7.32042 1.52292 2.11290 2.34939 2.73339 2.80436 3.09936 3.14089 3.32917 3.50751 3.56288 3.94843 4.45513 5.15173 5.42349 5.48002 5.49088 5.49711 5.60035 5.63668 5.70658 5.76601 5.77161 5.83700 5.92280 5.97463 6.17016 6.22618 6.29933 6.38281 6.45713 6.52508 6.65776 6.75080 6.83580 6.94182 7.19643 7.25254 7.42368 7.76388 8.18173 10.34027 10.74071 Molecular weight = 279.10amu Principal moments of inertia in cm(-1) A = 0.020516 B = 0.006813 C = 0.005843 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1364.436535 B = 4108.989960 C = 4790.738512 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.149 4.149 2 C -0.354 4.354 3 C -0.047 4.047 4 C -0.136 4.136 5 C -0.080 4.080 6 C -0.141 4.141 7 C 0.521 3.479 8 O -0.680 6.680 9 O -0.672 6.672 10 C -0.080 4.080 11 C -0.092 4.092 12 O -0.558 6.558 13 Si 1.075 2.925 14 H -0.300 1.300 15 H -0.274 1.274 16 H -0.248 1.248 17 C -0.129 4.129 18 Si 1.043 2.957 19 C -0.447 4.447 20 C -0.445 4.445 21 C -0.444 4.444 22 H 0.098 0.902 23 H 0.092 0.908 24 H 0.112 0.888 25 H 0.125 0.875 26 H 0.108 0.892 27 H 0.354 0.646 28 H 0.126 0.874 29 H 0.067 0.933 30 H 0.067 0.933 31 H 0.076 0.924 32 H 0.069 0.931 33 H 0.069 0.931 34 H 0.067 0.933 35 H 0.074 0.926 36 H 0.065 0.935 37 H 0.068 0.932 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.807 -17.850 0.796 18.788 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.186 4.186 2 C -0.396 4.396 3 C -0.048 4.048 4 C -0.154 4.154 5 C -0.099 4.099 6 C -0.144 4.144 7 C 0.358 3.642 8 O -0.596 6.596 9 O -0.590 6.590 10 C -0.080 4.080 11 C -0.197 4.197 12 O -0.363 6.363 13 Si 0.898 3.102 14 H -0.228 1.228 15 H -0.199 1.199 16 H -0.172 1.172 17 C -0.147 4.147 18 Si 1.235 2.765 19 C -0.554 4.554 20 C -0.553 4.553 21 C -0.552 4.552 22 H 0.116 0.884 23 H 0.110 0.890 24 H 0.130 0.870 25 H 0.143 0.857 26 H 0.125 0.875 27 H 0.200 0.800 28 H 0.144 0.856 29 H 0.086 0.914 30 H 0.086 0.914 31 H 0.095 0.905 32 H 0.088 0.912 33 H 0.088 0.912 34 H 0.087 0.913 35 H 0.093 0.907 36 H 0.084 0.916 37 H 0.087 0.913 Dipole moment (debyes) X Y Z Total from point charges -6.045 -16.616 1.987 17.793 hybrid contribution -0.073 -0.677 -1.287 1.456 sum -6.118 -17.293 0.700 18.357 Atomic orbital electron populations 1.24208 0.95656 1.01208 0.97500 1.28005 1.00816 1.08622 1.02112 1.18867 0.95989 0.93171 0.96730 1.20915 1.00460 0.93620 1.00378 1.21096 0.94507 0.96512 0.97738 1.22601 0.97488 0.99767 0.94511 1.16602 0.81513 0.83342 0.82791 1.90733 1.74106 1.48023 1.46709 1.90398 1.39681 1.82761 1.46124 1.20240 0.97559 0.93878 0.96368 1.26060 0.98119 0.89383 1.06095 1.86660 1.86126 1.26250 1.37229 0.83681 0.77728 0.77090 0.71675 1.22793 1.19859 1.17230 1.20635 0.96173 0.98009 0.99862 0.78436 0.66629 0.63578 0.67848 1.26128 1.05348 1.05400 1.18525 1.26119 1.09583 1.12420 1.07173 1.26064 1.15701 1.04162 1.09253 0.88379 0.89006 0.87003 0.85669 0.87459 0.80036 0.85599 0.91369 0.91364 0.90496 0.91171 0.91192 0.91336 0.90702 0.91618 0.91275 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -1.81 13.31 28.85 0.38 -1.43 16 2 C -0.35 -4.79 4.40 -37.63 -0.17 -4.96 16 3 C -0.05 -0.84 5.26 -104.93 -0.55 -1.40 16 4 C -0.14 -2.61 9.27 -39.61 -0.37 -2.98 16 5 C -0.08 -1.87 9.54 -39.55 -0.38 -2.25 16 6 C -0.14 -3.73 5.67 -104.95 -0.59 -4.32 16 7 C 0.52 16.66 7.56 34.44 0.26 16.92 16 8 O -0.68 -23.83 17.24 -20.57 -0.35 -24.18 16 9 O -0.67 -21.77 11.34 -20.56 -0.23 -22.00 16 10 C -0.08 -1.83 4.45 -104.59 -0.47 -2.29 16 11 C -0.09 -2.06 2.38 36.00 0.09 -1.97 16 12 O -0.56 -10.29 11.40 -35.23 -0.40 -10.69 16 13 Si 1.07 24.42 25.70 -169.99 -4.37 20.05 16 14 H -0.30 -6.37 7.11 56.52 0.40 -5.97 16 15 H -0.27 -5.89 7.11 56.52 0.40 -5.49 16 16 H -0.25 -6.58 6.32 56.52 0.36 -6.23 16 17 C -0.13 -2.47 8.30 -39.61 -0.33 -2.80 16 18 Si 1.04 10.26 11.29 -169.99 -1.92 8.34 16 19 C -0.45 -4.46 8.65 101.05 0.87 -3.59 16 20 C -0.45 -3.73 8.38 101.05 0.85 -2.89 16 21 C -0.44 -4.92 8.65 101.05 0.87 -4.05 16 22 H 0.10 0.91 7.14 -52.49 -0.37 0.54 16 23 H 0.09 1.18 7.84 -52.49 -0.41 0.77 16 24 H 0.11 1.83 7.93 -52.49 -0.42 1.42 16 25 H 0.13 2.95 7.64 -52.49 -0.40 2.55 16 26 H 0.11 2.63 6.20 -51.93 -0.32 2.31 16 27 H 0.35 5.15 8.86 45.56 0.40 5.55 16 28 H 0.13 2.09 5.28 -52.49 -0.28 1.81 16 29 H 0.07 0.65 7.96 -51.93 -0.41 0.24 16 30 H 0.07 0.59 7.96 -51.93 -0.41 0.17 16 31 H 0.08 0.85 6.85 -51.93 -0.36 0.50 16 32 H 0.07 0.59 7.96 -51.93 -0.41 0.17 16 33 H 0.07 0.52 7.96 -51.93 -0.41 0.11 16 34 H 0.07 0.53 7.61 -51.93 -0.40 0.13 16 35 H 0.07 0.91 7.96 -51.93 -0.41 0.50 16 36 H 0.06 0.61 7.96 -51.93 -0.41 0.20 16 37 H 0.07 0.80 7.96 -51.93 -0.41 0.39 16 LS Contribution 314.41 15.07 4.74 4.74 Total: -1.00 -35.72 314.41 -6.35 -42.07 By element: Atomic # 1 Polarization: 3.96 SS G_CDS: -4.28 Total: -0.32 kcal Atomic # 6 Polarization: -18.47 SS G_CDS: 0.47 Total: -18.00 kcal Atomic # 8 Polarization: -55.89 SS G_CDS: -0.99 Total: -56.88 kcal Atomic # 14 Polarization: 34.68 SS G_CDS: -6.29 Total: 28.39 kcal Total LS contribution 4.74 Total: 4.74 kcal Total: -35.72 -6.35 -42.07 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_271570_14761194_18352972.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -134.539 kcal (2) G-P(sol) polarization free energy of solvation -35.721 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -170.260 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.350 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.071 kcal (6) G-S(sol) free energy of system = (1) + (5) -176.610 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.53 seconds