Wall clock time and date at job start Mon Mar 8 2021 11:59:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.32565 * 1 3 3 C 1.47809 * 120.00331 * 2 1 4 4 C 1.39538 * 120.14628 * 133.73752 * 3 2 1 5 5 C 1.37970 * 119.85346 * 180.24891 * 4 3 2 6 6 C 1.38345 * 120.14784 * 359.47595 * 5 4 3 7 7 C 1.50693 * 119.85787 * 180.29479 * 6 5 4 8 8 O 1.42902 * 109.47098 * 65.00206 * 7 6 5 9 9 Si 1.86304 * 109.46797 * 184.99921 * 7 6 5 10 10 H 1.48499 * 109.47324 * 60.00424 * 9 7 6 11 11 H 1.48506 * 109.47228 * 179.97438 * 9 7 6 12 12 H 1.48497 * 109.47543 * 299.99979 * 9 7 6 13 13 C 1.38350 * 120.28076 * 0.27651 * 6 5 4 14 14 C 1.37968 * 120.14474 * 359.97435 * 13 6 5 15 15 Si 1.86800 * 119.99803 * 179.97438 * 2 1 3 16 16 C 1.86309 * 109.47199 * 273.09475 * 15 2 1 17 17 C 1.86299 * 109.47083 * 33.09180 * 15 2 1 18 18 C 1.86301 * 109.47157 * 153.09510 * 15 2 1 19 19 H 1.07991 * 120.00537 * 180.02562 * 1 2 3 20 20 H 1.08006 * 119.99855 * 0.02562 * 1 2 3 21 21 H 1.07995 * 120.06823 * 0.02562 * 4 3 2 22 22 H 1.08007 * 119.92344 * 179.74979 * 5 4 3 23 23 H 1.08993 * 109.47289 * 304.99846 * 7 6 5 24 24 H 0.96700 * 113.99922 * 60.00250 * 8 7 6 25 25 H 1.07998 * 119.92211 * 180.02562 * 13 6 5 26 26 H 1.07999 * 120.07738 * 180.02562 * 14 13 6 27 27 H 1.09005 * 109.46861 * 59.99724 * 16 15 2 28 28 H 1.08996 * 109.47200 * 179.97438 * 16 15 2 29 29 H 1.08993 * 109.47095 * 300.00325 * 16 15 2 30 30 H 1.09002 * 109.46998 * 60.00239 * 17 15 2 31 31 H 1.09002 * 109.47407 * 179.97438 * 17 15 2 32 32 H 1.08997 * 109.47605 * 300.00431 * 17 15 2 33 33 H 1.08998 * 109.46979 * 65.86144 * 18 15 2 34 34 H 1.08997 * 109.46750 * 185.86016 * 18 15 2 35 35 H 1.08993 * 109.46782 * 305.85890 * 18 15 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.3256 0.0000 0.0000 3 6 2.0648 1.2800 0.0000 4 6 3.1376 1.4697 0.8718 5 6 3.8201 2.6688 0.8703 6 6 3.4497 3.6780 -0.0005 7 6 4.2038 4.9826 -0.0012 8 8 5.5484 4.7554 -0.4287 9 14 3.3756 6.1779 -1.1658 10 1 1.9784 6.4142 -0.7216 11 1 4.1184 7.4639 -1.1661 12 1 3.3695 5.6090 -2.5374 13 6 2.3902 3.4943 -0.8710 14 6 1.6962 2.3019 -0.8759 15 14 2.2596 -1.6178 0.0007 16 6 2.4880 -2.2023 1.7550 17 6 1.2956 -2.8917 -0.9577 18 6 3.9266 -1.3728 -0.7942 19 1 -0.5400 -0.9352 0.0004 20 1 -0.5400 0.9354 -0.0004 21 1 3.4308 0.6810 1.5487 22 1 4.6481 2.8184 1.5475 23 1 4.2083 5.4003 1.0055 24 1 5.6207 4.3836 -1.3184 25 1 2.1062 4.2859 -1.5486 26 1 0.8695 2.1595 -1.5562 27 1 1.5126 -2.3455 2.2201 28 1 3.0325 -3.1464 1.7553 29 1 3.0518 -1.4569 2.3157 30 1 1.1620 -2.5498 -1.9840 31 1 1.8408 -3.8356 -0.9577 32 1 0.3203 -3.0350 -0.4927 33 1 4.5293 -0.7069 -0.1766 34 1 4.4292 -2.3354 -0.8881 35 1 3.7965 -0.9329 -1.7829 RHF calculation, no. of doubly occupied orbitals= 41 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_271570_14761194_9007478.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 11:59:31 Heat of formation + Delta-G solvation = -40.331232 kcal Electronic energy + Delta-G solvation = -14587.474725 eV Core-core repulsion = 12287.811398 eV Total energy + Delta-G solvation = -2299.663327 eV No. of doubly occupied orbitals = 41 Molecular weight (most abundant/longest-lived isotopes) = 236.110 amu Computer time = 0.32 seconds Orbital eigenvalues (eV) -40.49936 -37.72814 -34.90416 -32.06644 -31.09448 -29.55119 -28.46650 -28.41132 -26.52459 -23.76417 -22.82113 -20.43061 -18.48027 -17.04676 -16.86513 -16.20802 -15.87434 -15.20315 -15.06931 -14.75137 -14.32390 -14.19542 -14.02979 -13.81957 -13.60974 -13.48648 -13.29848 -13.21769 -13.11378 -12.76228 -12.35511 -12.19152 -12.04854 -11.57155 -11.36889 -10.94622 -10.89663 -10.41538 -10.36905 -9.86457 -9.21210 0.08839 0.48497 1.13865 1.17455 1.43130 1.51877 1.70784 1.84304 1.91520 2.08490 2.52615 2.89053 3.49594 3.74004 3.90277 4.00437 4.07772 4.43616 4.57466 4.62374 4.66734 4.68394 4.72112 4.72360 4.76459 4.78635 4.79971 4.93749 5.09485 5.19498 5.41856 5.47651 5.51137 5.55074 5.56586 5.61892 5.79067 6.07215 6.56044 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.128 4.128 2 C -0.374 4.374 3 C -0.026 4.026 4 C -0.119 4.119 5 C -0.085 4.085 6 C -0.128 4.128 7 C -0.079 4.079 8 O -0.539 6.539 9 Si 0.949 3.051 10 H -0.251 1.251 11 H -0.255 1.255 12 H -0.253 1.253 13 C -0.122 4.122 14 C -0.114 4.114 15 Si 1.049 2.951 16 C -0.448 4.448 17 C -0.449 4.449 18 C -0.446 4.446 19 H 0.105 0.895 20 H 0.094 0.906 21 H 0.126 0.874 22 H 0.128 0.872 23 H 0.117 0.883 24 H 0.376 0.624 25 H 0.119 0.881 26 H 0.124 0.876 27 H 0.069 0.931 28 H 0.071 0.929 29 H 0.069 0.931 30 H 0.070 0.930 31 H 0.072 0.928 32 H 0.069 0.931 33 H 0.071 0.929 34 H 0.069 0.931 35 H 0.069 0.931 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.107 -1.710 -0.435 2.082 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.164 4.164 2 C -0.415 4.415 3 C -0.026 4.026 4 C -0.137 4.137 5 C -0.103 4.103 6 C -0.129 4.129 7 C -0.190 4.190 8 O -0.344 6.344 9 Si 0.772 3.228 10 H -0.175 1.175 11 H -0.179 1.179 12 H -0.176 1.176 13 C -0.140 4.140 14 C -0.132 4.132 15 Si 1.241 2.759 16 C -0.556 4.556 17 C -0.557 4.557 18 C -0.554 4.554 19 H 0.123 0.877 20 H 0.112 0.888 21 H 0.144 0.856 22 H 0.146 0.854 23 H 0.135 0.865 24 H 0.223 0.777 25 H 0.136 0.864 26 H 0.142 0.858 27 H 0.089 0.911 28 H 0.090 0.910 29 H 0.088 0.912 30 H 0.089 0.911 31 H 0.091 0.909 32 H 0.088 0.912 33 H 0.090 0.910 34 H 0.088 0.912 35 H 0.088 0.912 Dipole moment (debyes) X Y Z Total from point charges -1.418 -0.816 -0.404 1.685 hybrid contribution -0.138 -0.381 -0.238 0.470 sum -1.556 -1.197 -0.642 2.065 Atomic orbital electron populations 1.24294 0.95520 1.01919 0.94717 1.28028 1.01045 1.08234 1.04180 1.19017 0.95075 0.93261 0.95268 1.21283 0.95513 0.97749 0.99130 1.20937 0.98965 0.92553 0.97871 1.20297 0.97486 0.97100 0.97977 1.24954 0.87157 0.99222 1.07676 1.86515 1.23964 1.86499 1.37392 0.85695 0.79546 0.78747 0.78786 1.17505 1.17873 1.17641 1.20982 0.96272 0.97829 0.98890 1.21236 0.99818 0.92645 0.99460 0.78359 0.66441 0.63436 0.67709 1.26138 1.04831 1.06063 1.18525 1.26143 1.08747 1.11911 1.08883 1.26109 1.17027 1.04681 1.07596 0.87703 0.88776 0.85566 0.85448 0.86549 0.77697 0.86368 0.85833 0.91135 0.90955 0.91164 0.91052 0.90872 0.91191 0.91008 0.91165 0.91196 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 0.11 13.31 28.82 0.38 0.49 16 2 C -0.37 0.16 4.42 -37.58 -0.17 -0.01 16 3 C -0.03 -0.03 5.26 -105.01 -0.55 -0.58 16 4 C -0.12 -0.09 8.64 -39.19 -0.34 -0.43 16 5 C -0.09 -0.09 9.66 -39.64 -0.38 -0.47 16 6 C -0.13 -0.14 5.36 -104.54 -0.56 -0.70 16 7 C -0.08 -0.01 2.80 36.00 0.10 0.09 16 8 O -0.54 -0.42 12.83 -35.23 -0.45 -0.87 16 9 Si 0.95 -0.02 25.13 -169.99 -4.27 -4.29 16 10 H -0.25 -0.17 7.11 56.52 0.40 0.23 16 11 H -0.25 -0.35 7.11 56.52 0.40 0.06 16 12 H -0.25 -0.03 7.04 56.52 0.40 0.37 16 13 C -0.12 -0.14 8.65 -39.64 -0.34 -0.48 16 14 C -0.11 -0.13 9.33 -39.19 -0.37 -0.50 16 15 Si 1.05 -2.24 11.15 -169.99 -1.90 -4.14 16 16 C -0.45 0.68 8.65 101.05 0.87 1.55 16 17 C -0.45 0.74 8.56 101.05 0.86 1.60 16 18 C -0.45 0.42 8.62 101.05 0.87 1.29 16 19 H 0.10 -0.25 7.36 -52.49 -0.39 -0.64 16 20 H 0.09 -0.06 7.84 -52.48 -0.41 -0.47 16 21 H 0.13 -0.12 6.95 -52.49 -0.37 -0.48 16 22 H 0.13 0.02 8.06 -52.48 -0.42 -0.40 16 23 H 0.12 -0.07 7.96 -51.93 -0.41 -0.49 16 24 H 0.38 -0.86 8.70 45.56 0.40 -0.46 16 25 H 0.12 -0.01 4.84 -52.49 -0.25 -0.26 16 26 H 0.12 -0.01 7.94 -52.49 -0.42 -0.43 16 27 H 0.07 -0.10 7.96 -51.93 -0.41 -0.51 16 28 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 29 H 0.07 -0.10 7.60 -51.93 -0.39 -0.50 16 30 H 0.07 -0.10 7.96 -51.93 -0.41 -0.51 16 31 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 32 H 0.07 -0.13 7.68 -51.93 -0.40 -0.53 16 33 H 0.07 -0.05 7.47 -51.93 -0.39 -0.44 16 34 H 0.07 -0.09 7.96 -51.93 -0.41 -0.50 16 35 H 0.07 -0.03 7.96 -51.93 -0.41 -0.44 16 LS Contribution 293.80 15.07 4.43 4.43 Total: 0.00 -3.97 293.80 -6.54 -10.51 By element: Atomic # 1 Polarization: -2.77 SS G_CDS: -4.74 Total: -7.50 kcal Atomic # 6 Polarization: 1.48 SS G_CDS: 0.39 Total: 1.87 kcal Atomic # 8 Polarization: -0.42 SS G_CDS: -0.45 Total: -0.87 kcal Atomic # 14 Polarization: -2.26 SS G_CDS: -6.17 Total: -8.43 kcal Total LS contribution 4.43 Total: 4.43 kcal Total: -3.97 -6.54 -10.51 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_271570_14761194_9007478.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -29.821 kcal (2) G-P(sol) polarization free energy of solvation -3.969 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -33.791 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.541 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -10.510 kcal (6) G-S(sol) free energy of system = (1) + (5) -40.331 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.32 seconds