Wall clock time and date at job start Mon Mar 8 2021 08:57:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86299 * 109.46867 * 2 1 4 4 C 1.50702 * 109.46965 * 120.00069 * 2 1 3 5 5 C 1.38005 * 120.04061 * 245.00170 * 4 2 1 6 6 C 1.39113 * 120.20667 * 180.02562 * 5 4 2 7 7 C 1.48326 * 120.01050 * 179.73034 * 6 5 4 8 8 C 1.39368 * 120.12125 * 129.71824 * 7 6 5 9 9 C 1.38022 * 119.86957 * 179.76824 * 8 7 6 10 10 C 1.38321 * 120.12203 * 0.49295 * 9 8 7 11 11 C 1.50708 * 119.87484 * 179.76425 * 10 9 8 12 12 H 1.08998 * 112.84964 * 191.21899 * 11 10 9 13 13 C 1.53781 * 113.60989 * 322.52017 * 11 10 9 14 14 C 1.53781 * 87.07817 * 139.97894 * 13 11 10 15 15 H 1.09005 * 113.61367 * 89.11327 * 14 13 11 16 16 O 1.42896 * 113.61951 * 220.01672 * 14 13 11 17 17 C 1.53779 * 113.61118 * 60.01753 * 11 10 9 18 18 C 1.38322 * 120.25445 * 359.78401 * 10 9 8 19 19 C 1.38010 * 120.12312 * 359.95825 * 18 10 9 20 20 C 1.40312 * 119.98477 * 359.45663 * 6 5 4 21 21 O 1.36067 * 129.91764 * 181.15257 * 20 6 5 22 22 C 1.43779 * 109.19757 * 199.11284 * 21 20 6 23 23 C 1.54708 * 102.75344 * 332.12688 * 22 21 20 24 24 C 1.38755 * 118.79857 * 0.90012 * 20 6 5 25 25 C 1.37785 * 120.85501 * 359.17888 * 24 20 6 26 26 H 0.96699 * 114.00169 * 300.00183 * 1 2 3 27 27 H 1.08998 * 109.46602 * 239.99917 * 2 1 3 28 28 H 1.48504 * 110.00158 * 299.99792 * 3 2 1 29 29 H 1.48497 * 110.00244 * 61.31900 * 3 2 1 30 30 H 1.08002 * 119.89461 * 359.78282 * 5 4 2 31 31 H 1.07995 * 120.06626 * 0.02562 * 8 7 6 32 32 H 1.07995 * 119.93742 * 180.22636 * 9 8 7 33 33 H 1.08997 * 113.61493 * 254.52969 * 13 11 10 34 34 H 1.08999 * 113.61591 * 25.43598 * 13 11 10 35 35 H 0.96701 * 114.00338 * 277.50403 * 16 14 13 36 36 H 1.08994 * 113.61797 * 334.57125 * 17 11 10 37 37 H 1.09002 * 113.60830 * 105.47630 * 17 11 10 38 38 H 1.08002 * 119.94253 * 179.97438 * 18 10 9 39 39 H 1.08001 * 120.06546 * 179.97438 * 19 18 10 40 40 H 1.09005 * 110.75755 * 90.43976 * 22 21 20 41 41 H 1.09001 * 110.75698 * 213.81354 * 22 21 20 42 42 H 1.09000 * 110.94196 * 267.04671 * 23 22 21 43 43 H 1.08998 * 110.93823 * 143.36557 * 23 22 21 44 44 H 1.08004 * 119.88375 * 180.40336 * 25 24 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.6376 -0.0143 2.1902 6 6 3.1033 -0.6668 3.3272 7 6 3.8671 0.0844 4.3531 8 6 3.5054 -0.0013 5.6963 9 6 4.2227 0.6960 6.6471 10 6 5.2923 1.4868 6.2679 11 6 6.0684 2.2501 7.3102 12 1 6.7532 2.9797 6.8781 13 6 5.1909 2.8185 8.4379 14 6 6.3147 2.4172 9.4078 15 1 7.0665 3.1935 9.5502 16 8 5.8397 1.8704 10.6396 17 6 6.7179 1.3511 8.3755 18 6 5.6522 1.5801 4.9356 19 6 4.9454 0.8831 3.9768 20 6 2.8455 -2.0344 3.5060 21 8 3.1811 -2.8589 4.5350 22 6 3.1080 -4.2241 4.0901 23 6 2.0422 -4.1619 2.9704 24 6 2.1400 -2.7155 2.5243 25 6 1.6837 -2.0623 1.4002 26 1 -0.3933 0.4417 0.7650 27 1 1.7923 -0.5138 -0.8900 28 1 1.5615 2.4679 -1.2085 29 1 1.5878 2.4586 1.2242 30 1 2.8327 1.0395 2.0563 31 1 2.6681 -0.6155 5.9930 32 1 3.9457 0.6275 7.6887 33 1 5.0363 3.8953 8.3702 34 1 4.2640 2.2656 8.5908 35 1 5.5845 2.5360 11.2930 36 1 6.2086 0.3971 8.5113 37 1 7.7962 1.2434 8.2574 38 1 6.4880 2.1994 4.6450 39 1 5.2270 0.9569 2.9367 40 1 4.0680 -4.5525 3.6916 41 1 2.7806 -4.8771 4.8991 42 1 1.0500 -4.3816 3.3644 43 1 2.2944 -4.8391 2.1544 44 1 1.1305 -2.6065 0.6490 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_271570_16463832_13419902.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 08:57:45 Heat of formation + Delta-G solvation = -32.765609 kcal Electronic energy + Delta-G solvation = -26866.384664 eV Core-core repulsion = 23102.148185 eV Total energy + Delta-G solvation = -3764.236478 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 325.140 amu Computer time = 0.99 seconds Orbital eigenvalues (eV) -42.23758 -41.05575 -39.55737 -39.02475 -37.22468 -36.06679 -34.16744 -32.62336 -31.84216 -30.87138 -29.83448 -26.72434 -26.68201 -26.03414 -24.40100 -23.61539 -23.14711 -22.00806 -21.55685 -20.20120 -18.76907 -18.46917 -18.34543 -17.90590 -17.21176 -16.97784 -16.56480 -16.25857 -15.97860 -15.86421 -15.64039 -15.28714 -15.11963 -14.63663 -14.48661 -14.24596 -14.09061 -13.95833 -13.81729 -13.63885 -13.40765 -13.38754 -13.25261 -12.83071 -12.57182 -12.44128 -12.23415 -12.20531 -11.96780 -11.81715 -11.62572 -11.53763 -11.33432 -10.74716 -10.61500 -10.12712 -9.77079 -9.38230 -8.87385 -4.98149 -0.08572 0.18476 0.58180 0.67366 1.27136 1.58924 1.95138 2.21021 2.50854 2.87739 3.22243 3.32429 3.40293 3.49604 3.53856 3.56976 3.64979 3.81352 3.90252 3.94282 3.97115 4.05139 4.09041 4.14275 4.17111 4.20461 4.33550 4.43126 4.47396 4.54430 4.58467 4.69140 4.70396 4.72222 4.77786 4.80991 4.92564 4.97018 5.01774 5.08698 5.12491 5.24247 5.30657 5.34657 5.39664 5.49280 5.58837 5.72373 5.78750 6.09900 6.15135 6.39726 6.70448 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.530 6.530 2 C -0.067 4.067 3 Si 0.680 3.320 4 C -0.144 4.144 5 C -0.072 4.072 6 C -0.059 4.059 7 C -0.049 4.049 8 C -0.092 4.092 9 C -0.114 4.114 10 C -0.067 4.067 11 C -0.073 4.073 12 H 0.101 0.899 13 C -0.163 4.163 14 C 0.074 3.926 15 H 0.083 0.917 16 O -0.560 6.560 17 C -0.119 4.119 18 C -0.115 4.115 19 C -0.104 4.104 20 C 0.127 3.873 21 O -0.296 6.296 22 C 0.049 3.951 23 C -0.111 4.111 24 C -0.173 4.173 25 C -0.040 4.040 26 H 0.376 0.624 27 H 0.119 0.881 28 H -0.255 1.255 29 H -0.258 1.258 30 H 0.136 0.864 31 H 0.122 0.878 32 H 0.124 0.876 33 H 0.072 0.928 34 H 0.094 0.906 35 H 0.379 0.621 36 H 0.093 0.907 37 H 0.076 0.924 38 H 0.125 0.875 39 H 0.127 0.873 40 H 0.080 0.920 41 H 0.109 0.891 42 H 0.093 0.907 43 H 0.094 0.906 44 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.310 0.253 -0.034 2.324 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.336 6.336 2 C -0.177 4.177 3 Si 0.581 3.419 4 C -0.144 4.144 5 C -0.090 4.090 6 C -0.060 4.060 7 C -0.049 4.049 8 C -0.110 4.110 9 C -0.132 4.132 10 C -0.067 4.067 11 C -0.091 4.091 12 H 0.119 0.881 13 C -0.201 4.201 14 C 0.015 3.985 15 H 0.101 0.899 16 O -0.366 6.366 17 C -0.157 4.157 18 C -0.133 4.133 19 C -0.122 4.122 20 C 0.081 3.919 21 O -0.209 6.209 22 C -0.025 4.025 23 C -0.148 4.148 24 C -0.173 4.173 25 C -0.058 4.058 26 H 0.224 0.776 27 H 0.136 0.864 28 H -0.180 1.180 29 H -0.183 1.183 30 H 0.153 0.847 31 H 0.140 0.860 32 H 0.142 0.858 33 H 0.090 0.910 34 H 0.112 0.888 35 H 0.226 0.774 36 H 0.111 0.889 37 H 0.095 0.905 38 H 0.143 0.857 39 H 0.145 0.855 40 H 0.098 0.902 41 H 0.127 0.873 42 H 0.111 0.889 43 H 0.113 0.887 44 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges 2.382 0.255 -0.661 2.485 hybrid contribution -1.258 0.126 0.692 1.441 sum 1.124 0.381 0.032 1.188 Atomic orbital electron populations 1.86599 1.17727 1.79940 1.49346 1.24911 0.83908 1.10721 0.98124 0.95061 0.91741 0.74713 0.80402 1.20010 1.02489 0.94376 0.97572 1.20835 0.96806 0.99353 0.91986 1.17868 1.02592 0.89722 0.95836 1.18606 0.96051 0.97765 0.92492 1.21165 0.99501 0.98503 0.91826 1.20945 0.95553 0.97147 0.99526 1.19668 0.95831 0.97329 0.93840 1.21305 0.97575 0.97683 0.92574 0.88068 1.23836 0.98992 1.01602 0.95663 1.23370 0.95529 0.96453 0.83124 0.89924 1.86539 1.86288 1.37587 1.26138 1.23171 1.01333 0.98467 0.92711 1.20962 1.00041 1.00029 0.92232 1.21198 0.94885 0.96417 0.99740 1.19540 0.93630 0.91282 0.87435 1.86885 1.84935 1.16558 1.32521 1.23909 0.99302 0.81666 0.97660 1.21832 1.00761 0.93310 0.98878 1.20776 1.03023 0.96456 0.97092 1.20185 0.96801 0.93201 0.95633 0.77613 0.86354 1.18005 1.18296 0.84659 0.86017 0.85789 0.90966 0.88791 0.77385 0.88863 0.90525 0.85727 0.85538 0.90210 0.87277 0.88914 0.88718 0.85262 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.72 12.84 -35.23 -0.45 -1.17 16 2 C -0.07 0.01 2.81 36.01 0.10 0.11 16 3 Si 0.68 -0.44 29.88 -169.99 -5.08 -5.52 16 4 C -0.14 -0.09 5.35 -104.62 -0.56 -0.65 16 5 C -0.07 -0.07 8.10 -39.34 -0.32 -0.39 16 6 C -0.06 -0.14 5.50 -104.64 -0.58 -0.72 16 7 C -0.05 -0.12 5.45 -104.91 -0.57 -0.70 16 8 C -0.09 -0.25 9.21 -39.24 -0.36 -0.61 16 9 C -0.11 -0.22 8.59 -39.63 -0.34 -0.56 16 10 C -0.07 -0.08 5.29 -104.56 -0.55 -0.64 16 11 C -0.07 0.02 3.98 -90.96 -0.36 -0.34 16 12 H 0.10 -0.15 8.09 -51.93 -0.42 -0.57 16 13 C -0.16 0.07 7.28 -25.92 -0.19 -0.12 16 14 C 0.07 -0.02 5.21 -25.92 -0.14 -0.15 16 15 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 16 O -0.56 -0.60 13.67 -35.23 -0.48 -1.08 16 17 C -0.12 -0.05 7.38 -25.92 -0.19 -0.24 16 18 C -0.11 -0.10 9.69 -39.63 -0.38 -0.48 16 19 C -0.10 -0.13 9.50 -39.25 -0.37 -0.50 16 20 C 0.13 0.34 6.59 -38.61 -0.25 0.09 16 21 O -0.30 -0.81 10.70 -19.95 -0.21 -1.03 16 22 C 0.05 -0.03 8.01 38.06 0.30 0.27 16 23 C -0.11 0.10 7.12 -26.50 -0.19 -0.09 16 24 C -0.17 -0.24 6.27 -104.11 -0.65 -0.90 16 25 C -0.04 -0.04 9.67 -39.66 -0.38 -0.42 16 26 H 0.38 -0.46 8.70 45.56 0.40 -0.07 16 27 H 0.12 -0.12 7.96 -51.93 -0.41 -0.53 16 28 H -0.26 -0.63 7.11 56.52 0.40 -0.23 16 29 H -0.26 -0.37 7.01 56.52 0.40 0.02 16 30 H 0.14 -0.06 4.81 -52.49 -0.25 -0.31 16 31 H 0.12 0.32 8.04 -52.49 -0.42 -0.10 16 32 H 0.12 0.15 6.64 -52.49 -0.35 -0.20 16 33 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 34 H 0.09 0.04 6.30 -51.93 -0.33 -0.29 16 35 H 0.38 -1.14 9.12 45.56 0.42 -0.72 16 36 H 0.09 0.16 7.72 -51.93 -0.40 -0.24 16 37 H 0.08 -0.02 8.14 -51.93 -0.42 -0.44 16 38 H 0.12 -0.14 8.05 -52.49 -0.42 -0.57 16 39 H 0.13 -0.10 8.04 -52.49 -0.42 -0.52 16 40 H 0.08 -0.12 8.14 -51.93 -0.42 -0.55 16 41 H 0.11 -0.28 8.14 -51.93 -0.42 -0.70 16 42 H 0.09 -0.14 8.14 -51.93 -0.42 -0.56 16 43 H 0.09 -0.22 8.14 -51.93 -0.42 -0.65 16 44 H 0.13 0.01 8.06 -52.48 -0.42 -0.41 16 LS Contribution 360.71 15.07 5.44 5.44 Total: 0.00 -7.12 360.71 -11.98 -19.10 By element: Atomic # 1 Polarization: -3.50 SS G_CDS: -5.20 Total: -8.70 kcal Atomic # 6 Polarization: -1.05 SS G_CDS: -5.99 Total: -7.04 kcal Atomic # 8 Polarization: -2.13 SS G_CDS: -1.15 Total: -3.28 kcal Atomic # 14 Polarization: -0.44 SS G_CDS: -5.08 Total: -5.52 kcal Total LS contribution 5.44 Total: 5.44 kcal Total: -7.12 -11.98 -19.10 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_271570_16463832_13419902.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -13.662 kcal (2) G-P(sol) polarization free energy of solvation -7.122 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -20.785 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.981 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.103 kcal (6) G-S(sol) free energy of system = (1) + (5) -32.766 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.99 seconds