Wall clock time and date at job start Mon Mar 8 2021 08:56:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53003 * 1 3 3 O 1.42902 * 109.47219 * 2 1 4 4 C 1.35938 * 116.99855 * 180.02562 * 3 2 1 5 5 C 1.39626 * 120.13446 * 270.02594 * 4 3 2 6 6 C 1.48339 * 120.12372 * 0.02562 * 5 4 3 7 7 C 1.39362 * 120.12368 * 309.72215 * 6 5 4 8 8 C 1.38008 * 119.87332 * 179.74545 * 7 6 5 9 9 C 1.38320 * 120.12347 * 0.55840 * 8 7 6 10 10 Si 1.86807 * 119.87524 * 179.71853 * 9 8 7 11 11 C 1.86295 * 109.47232 * 269.97771 * 10 9 8 12 12 C 1.86296 * 109.47041 * 29.97926 * 10 9 8 13 13 C 1.86297 * 109.46925 * 149.97782 * 10 9 8 14 14 C 1.38322 * 120.25160 * 359.69922 * 9 8 7 15 15 C 1.38015 * 120.11985 * 0.02562 * 14 9 8 16 16 C 1.39412 * 119.75265 * 179.71319 * 5 4 3 17 17 C 1.37973 * 120.02079 * 0.53647 * 16 5 4 18 18 C 1.50696 * 119.85917 * 179.73403 * 17 16 5 19 19 O 1.42903 * 109.47131 * 299.72167 * 18 17 16 20 20 Si 1.86305 * 109.47185 * 179.72708 * 18 17 16 21 21 H 1.48499 * 109.47126 * 179.97438 * 20 18 17 22 22 H 1.48496 * 109.46885 * 299.99843 * 20 18 17 23 23 H 1.48499 * 109.46850 * 59.99646 * 20 18 17 24 24 C 1.38382 * 120.27827 * 359.45757 * 17 16 5 25 25 C 1.38573 * 120.24773 * 0.27195 * 24 17 16 26 26 O 1.35993 * 120.01424 * 180.02562 * 25 24 17 27 27 C 1.42897 * 117.00111 * 0.02562 * 26 25 24 28 28 H 1.08998 * 109.46948 * 180.02562 * 1 2 3 29 29 H 1.09004 * 109.46521 * 299.99398 * 1 2 3 30 30 H 1.08999 * 109.47231 * 59.99512 * 1 2 3 31 31 H 1.09006 * 109.46711 * 240.00094 * 2 1 3 32 32 H 1.08999 * 109.47231 * 120.00488 * 2 1 3 33 33 H 1.07998 * 120.06252 * 0.02817 * 7 6 5 34 34 H 1.08002 * 119.93761 * 180.30176 * 8 7 6 35 35 H 1.09006 * 109.47323 * 60.00215 * 11 10 9 36 36 H 1.08998 * 109.47022 * 179.97438 * 11 10 9 37 37 H 1.09004 * 109.47368 * 300.00200 * 11 10 9 38 38 H 1.09008 * 109.47389 * 59.99843 * 12 10 9 39 39 H 1.08998 * 109.47214 * 179.97438 * 12 10 9 40 40 H 1.09004 * 109.47385 * 299.99997 * 12 10 9 41 41 H 1.09004 * 109.46943 * 60.00248 * 13 10 9 42 42 H 1.09000 * 109.47451 * 180.02562 * 13 10 9 43 43 H 1.08999 * 109.47645 * 300.00057 * 13 10 9 44 44 H 1.08001 * 119.94356 * 179.97438 * 14 9 8 45 45 H 1.08005 * 120.05855 * 180.02562 * 15 14 9 46 46 H 1.07998 * 119.99149 * 180.26485 * 16 5 4 47 47 H 1.08999 * 109.47358 * 59.72527 * 18 17 16 48 48 H 0.96700 * 114.00311 * 300.00591 * 19 18 17 49 49 H 1.07997 * 119.87426 * 180.25224 * 24 17 16 50 50 H 1.09009 * 109.47479 * 179.97438 * 27 26 25 51 51 H 1.08991 * 109.47331 * 299.99715 * 27 26 25 52 52 H 1.09000 * 109.46972 * 60.00039 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0064 1.3473 0.0000 4 6 3.3541 1.5253 -0.0005 5 6 4.0496 1.6164 1.2067 6 6 3.3207 1.5187 2.4950 7 6 2.1920 2.3042 2.7214 8 6 1.5148 2.2053 3.9198 9 6 1.9610 1.3370 4.8997 10 14 1.0435 1.2145 6.5223 11 6 1.7492 2.4457 7.7293 12 6 -0.7615 1.5819 6.2443 13 6 1.2280 -0.5065 7.2115 14 6 3.0838 0.5589 4.6826 15 6 3.7656 0.6455 3.4857 16 6 5.4324 1.7930 1.1969 17 6 6.1076 1.8883 -0.0026 18 6 7.6017 2.0852 -0.0089 19 8 7.9243 3.3043 0.6631 20 14 8.2099 2.1661 -1.7680 21 1 9.6821 2.3608 -1.7742 22 1 7.8746 0.8993 -2.4664 23 1 7.5577 3.3034 -2.4654 24 6 5.4195 1.7981 -1.1997 25 6 4.0456 1.6170 -1.2032 26 8 3.3741 1.5284 -2.3825 27 6 4.1485 1.6299 -3.5792 28 1 -0.3633 -1.0277 0.0005 29 1 -0.3632 0.5138 0.8901 30 1 -0.3634 0.5139 -0.8899 31 1 1.8933 -0.5139 -0.8901 32 1 1.8934 -0.5139 0.8899 33 1 1.8453 2.9856 1.9586 34 1 0.6371 2.8099 4.0944 35 1 1.6413 3.4527 7.3261 36 1 1.2136 2.3744 8.6759 37 1 2.8054 2.2307 7.8919 38 1 -1.1745 0.8615 5.5381 39 1 -1.2970 1.5099 7.1910 40 1 -0.8695 2.5888 5.8411 41 1 2.2842 -0.7214 7.3741 42 1 0.6923 -0.5782 8.1581 43 1 0.8152 -1.2269 6.5054 44 1 3.4281 -0.1170 5.4514 45 1 4.6420 0.0372 3.3171 46 1 5.9748 1.8597 2.1284 47 1 8.0804 1.2504 0.5030 48 1 7.5311 4.0911 0.2612 49 1 5.9551 1.8695 -2.1348 50 1 3.4922 1.5430 -4.4452 51 1 4.6559 2.5942 -3.6029 52 1 4.8880 0.8295 -3.6024 RHF calculation, no. of doubly occupied orbitals= 65 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_271570_17507730_12419784.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 08:56:33 Heat of formation + Delta-G solvation = -105.086453 kcal Electronic energy + Delta-G solvation = -30662.391783 eV Core-core repulsion = 26715.727178 eV Total energy + Delta-G solvation = -3946.664605 eV No. of doubly occupied orbitals = 65 Molecular weight (most abundant/longest-lived isotopes) = 360.172 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -41.78330 -39.93421 -39.00603 -38.87751 -37.00100 -33.59240 -32.60157 -31.78228 -30.92186 -29.95915 -29.33343 -28.51967 -28.41146 -28.37833 -26.35700 -24.32025 -23.86449 -23.33926 -22.52971 -21.51376 -19.48177 -18.61326 -18.01862 -17.56258 -17.31737 -16.94257 -16.32680 -16.15968 -16.08429 -15.86084 -15.72111 -15.65824 -15.18408 -14.75487 -14.55131 -14.27025 -14.15812 -14.06966 -13.99896 -13.81425 -13.60654 -13.43844 -13.36749 -13.26817 -13.23308 -13.16623 -13.07202 -12.92438 -12.86416 -12.46807 -12.38592 -12.26553 -12.12400 -11.97560 -11.86825 -11.76824 -11.04009 -10.87553 -10.84686 -10.69390 -10.49323 -10.11808 -9.68443 -9.17753 -9.12764 -0.25776 0.20536 0.62215 0.67032 1.04655 1.32551 1.40021 1.76108 1.81138 1.88627 1.98033 2.16980 2.30693 2.58626 2.84169 3.07860 3.36463 3.49290 3.60315 3.92430 4.06868 4.10285 4.12290 4.13253 4.21772 4.25252 4.30432 4.33473 4.39152 4.48552 4.50024 4.56227 4.62544 4.71154 4.73199 4.75118 4.77750 4.79077 4.79497 4.80221 4.90097 4.93548 5.02923 5.07577 5.20904 5.24995 5.27782 5.34594 5.43399 5.47119 5.53844 5.56951 5.66462 5.71910 5.76373 6.11820 6.21832 6.48033 6.68869 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.149 4.149 2 C 0.065 3.935 3 O -0.317 6.317 4 C 0.083 3.917 5 C -0.026 4.026 6 C -0.041 4.041 7 C -0.094 4.094 8 C -0.091 4.091 9 C -0.365 4.365 10 Si 1.058 2.942 11 C -0.449 4.449 12 C -0.449 4.449 13 C -0.449 4.449 14 C -0.091 4.091 15 C -0.115 4.115 16 C -0.101 4.101 17 C -0.085 4.085 18 C -0.079 4.079 19 O -0.535 6.535 20 Si 0.943 3.057 21 H -0.250 1.250 22 H -0.250 1.250 23 H -0.250 1.250 24 C -0.205 4.205 25 C 0.119 3.881 26 O -0.302 6.302 27 C 0.020 3.980 28 H 0.074 0.926 29 H 0.065 0.935 30 H 0.065 0.935 31 H 0.052 0.948 32 H 0.051 0.949 33 H 0.124 0.876 34 H 0.121 0.879 35 H 0.069 0.931 36 H 0.070 0.930 37 H 0.069 0.931 38 H 0.070 0.930 39 H 0.071 0.929 40 H 0.069 0.931 41 H 0.069 0.931 42 H 0.071 0.929 43 H 0.070 0.930 44 H 0.122 0.878 45 H 0.120 0.880 46 H 0.137 0.863 47 H 0.122 0.878 48 H 0.378 0.622 49 H 0.130 0.870 50 H 0.106 0.894 51 H 0.057 0.943 52 H 0.056 0.944 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.088 -1.386 -0.471 1.467 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.206 4.206 2 C -0.010 4.010 3 O -0.234 6.234 4 C 0.038 3.962 5 C -0.027 4.027 6 C -0.041 4.041 7 C -0.112 4.112 8 C -0.109 4.109 9 C -0.406 4.406 10 Si 1.250 2.750 11 C -0.556 4.556 12 C -0.557 4.557 13 C -0.557 4.557 14 C -0.109 4.109 15 C -0.133 4.133 16 C -0.119 4.119 17 C -0.085 4.085 18 C -0.189 4.189 19 O -0.340 6.340 20 Si 0.766 3.234 21 H -0.173 1.173 22 H -0.174 1.174 23 H -0.174 1.174 24 C -0.223 4.223 25 C 0.073 3.927 26 O -0.215 6.215 27 C -0.075 4.075 28 H 0.093 0.907 29 H 0.084 0.916 30 H 0.084 0.916 31 H 0.070 0.930 32 H 0.069 0.931 33 H 0.141 0.859 34 H 0.139 0.861 35 H 0.088 0.912 36 H 0.089 0.911 37 H 0.088 0.912 38 H 0.089 0.911 39 H 0.090 0.910 40 H 0.088 0.912 41 H 0.088 0.912 42 H 0.090 0.910 43 H 0.089 0.911 44 H 0.139 0.861 45 H 0.138 0.862 46 H 0.155 0.845 47 H 0.140 0.860 48 H 0.225 0.775 49 H 0.147 0.853 50 H 0.124 0.876 51 H 0.075 0.925 52 H 0.074 0.926 Dipole moment (debyes) X Y Z Total from point charges 0.219 -1.647 -1.051 1.966 hybrid contribution 0.030 0.166 -0.391 0.426 sum 0.249 -1.481 -1.442 2.082 Atomic orbital electron populations 1.21736 0.92961 1.02559 1.03368 1.22703 0.95693 0.82125 1.00437 1.86079 1.16257 1.27102 1.93968 1.17884 0.83975 1.05511 0.88798 1.18970 0.92840 0.99463 0.91431 1.18547 0.95750 0.97822 0.91987 1.21309 0.94071 0.98554 0.97282 1.21014 0.98960 0.97805 0.93107 1.27409 1.02319 0.98348 1.12563 0.78200 0.66080 0.67308 0.63462 1.26124 1.06879 1.11627 1.11012 1.26134 1.19447 1.05171 1.04942 1.26134 1.04656 1.18201 1.06688 1.20968 0.95119 0.98418 0.96406 1.21260 0.99932 0.98580 0.93502 1.20893 0.91987 1.00876 0.98161 1.20019 0.96271 0.99669 0.92554 1.24961 0.92893 0.90709 1.10380 1.86528 1.75097 1.15313 1.57071 0.85776 0.81101 0.81693 0.74824 1.17328 1.17415 1.17404 1.21050 0.93134 1.09389 0.98738 1.19191 0.90179 0.97353 0.85969 1.86194 1.35854 1.87424 1.12044 1.23183 0.97452 1.01368 0.85451 0.90728 0.91615 0.91587 0.93015 0.93071 0.85852 0.86063 0.91160 0.91105 0.91169 0.91080 0.91022 0.91153 0.91184 0.91010 0.91096 0.86057 0.86230 0.84503 0.86040 0.77521 0.85269 0.87584 0.92476 0.92558 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -0.09 10.28 37.16 0.38 0.29 16 2 C 0.06 0.14 6.78 37.16 0.25 0.39 16 3 O -0.32 -1.27 8.20 -34.12 -0.28 -1.55 16 4 C 0.08 0.31 5.65 -38.77 -0.22 0.09 16 5 C -0.03 -0.08 5.48 -104.79 -0.57 -0.65 16 6 C -0.04 -0.11 5.27 -104.91 -0.55 -0.66 16 7 C -0.09 -0.24 8.78 -39.25 -0.34 -0.59 16 8 C -0.09 -0.11 9.28 -39.64 -0.37 -0.48 16 9 C -0.36 -0.11 4.60 -39.52 -0.18 -0.30 16 10 Si 1.06 -2.23 12.31 -169.99 -2.09 -4.32 16 11 C -0.45 0.48 8.65 101.05 0.87 1.36 16 12 C -0.45 0.64 8.52 101.05 0.86 1.50 16 13 C -0.45 0.69 8.52 101.05 0.86 1.55 16 14 C -0.09 -0.07 9.28 -39.63 -0.37 -0.44 16 15 C -0.11 -0.19 9.50 -39.25 -0.37 -0.56 16 16 C -0.10 -0.18 9.06 -39.24 -0.36 -0.53 16 17 C -0.08 -0.09 5.38 -104.67 -0.56 -0.65 16 18 C -0.08 0.03 2.81 36.00 0.10 0.13 16 19 O -0.54 -0.15 12.77 -35.23 -0.45 -0.60 16 20 Si 0.94 -0.64 25.06 -169.99 -4.26 -4.90 16 21 H -0.25 -0.15 7.11 56.52 0.40 0.25 16 22 H -0.25 0.10 7.11 56.52 0.40 0.50 16 23 H -0.25 0.15 7.11 56.52 0.40 0.55 16 24 C -0.20 -0.31 7.66 -39.40 -0.30 -0.61 16 25 C 0.12 0.37 6.69 -39.16 -0.26 0.11 16 26 O -0.30 -0.90 10.28 -34.29 -0.35 -1.25 16 27 C 0.02 -0.01 9.81 101.05 0.99 0.98 16 28 H 0.07 -0.06 8.14 -51.93 -0.42 -0.49 16 29 H 0.06 0.05 8.14 -51.93 -0.42 -0.37 16 30 H 0.07 0.06 8.14 -51.93 -0.42 -0.36 16 31 H 0.05 0.11 8.14 -51.93 -0.42 -0.32 16 32 H 0.05 0.11 8.14 -51.93 -0.42 -0.32 16 33 H 0.12 0.35 7.70 -52.49 -0.40 -0.05 16 34 H 0.12 -0.07 7.40 -52.49 -0.39 -0.46 16 35 H 0.07 -0.05 7.96 -51.93 -0.41 -0.47 16 36 H 0.07 -0.09 7.96 -51.93 -0.41 -0.51 16 37 H 0.07 -0.06 7.96 -51.93 -0.41 -0.47 16 38 H 0.07 -0.08 7.96 -51.92 -0.41 -0.50 16 39 H 0.07 -0.11 7.96 -51.93 -0.41 -0.53 16 40 H 0.07 -0.10 7.67 -51.93 -0.40 -0.50 16 41 H 0.07 -0.12 7.67 -51.93 -0.40 -0.52 16 42 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 43 H 0.07 -0.09 7.96 -51.93 -0.41 -0.50 16 44 H 0.12 -0.15 7.40 -52.49 -0.39 -0.53 16 45 H 0.12 0.05 8.04 -52.48 -0.42 -0.37 16 46 H 0.14 0.14 8.03 -52.49 -0.42 -0.28 16 47 H 0.12 -0.17 7.96 -51.93 -0.41 -0.59 16 48 H 0.38 -1.02 8.70 45.56 0.40 -0.62 16 49 H 0.13 0.00 3.07 -52.49 -0.16 -0.16 16 50 H 0.11 -0.26 8.14 -51.92 -0.42 -0.68 16 51 H 0.06 -0.08 7.66 -51.93 -0.40 -0.48 16 52 H 0.06 -0.09 7.66 -51.93 -0.40 -0.49 16 LS Contribution 425.51 15.07 6.41 6.41 Total: 0.00 -5.89 425.51 -9.18 -15.07 By element: Atomic # 1 Polarization: -1.78 SS G_CDS: -8.02 Total: -9.80 kcal Atomic # 6 Polarization: 1.08 SS G_CDS: -0.14 Total: 0.94 kcal Atomic # 8 Polarization: -2.33 SS G_CDS: -1.08 Total: -3.41 kcal Atomic # 14 Polarization: -2.87 SS G_CDS: -6.35 Total: -9.22 kcal Total LS contribution 6.41 Total: 6.41 kcal Total: -5.89 -9.18 -15.07 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_271570_17507730_12419784.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -90.014 kcal (2) G-P(sol) polarization free energy of solvation -5.889 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -95.903 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.183 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.072 kcal (6) G-S(sol) free energy of system = (1) + (5) -105.086 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.03 seconds