Wall clock time and date at job start Mon Mar 8 2021 09:10:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42895 * 1 3 3 C 1.36002 * 116.99844 * 2 1 4 4 C 1.38572 * 120.01376 * 0.02562 * 3 2 1 5 5 C 1.38382 * 120.24684 * 180.02562 * 4 3 2 6 6 C 1.50696 * 119.86198 * 179.97438 * 5 4 3 7 7 O 1.42903 * 109.47131 * 119.99697 * 6 5 4 8 8 Si 1.86305 * 109.47185 * 0.02562 * 6 5 4 9 9 H 1.48499 * 109.47126 * 179.97438 * 8 6 5 10 10 H 1.48496 * 109.46885 * 299.99843 * 8 6 5 11 11 H 1.48499 * 109.46850 * 59.99646 * 8 6 5 12 12 C 1.37969 * 120.27498 * 0.25298 * 5 4 3 13 13 C 1.39406 * 120.02726 * 359.49101 * 12 5 4 14 14 C 1.48339 * 120.12607 * 180.25170 * 13 12 5 15 15 C 1.39355 * 120.12097 * 129.97309 * 14 13 12 16 16 C 1.38012 * 119.87502 * 179.77111 * 15 14 13 17 17 C 1.38322 * 120.12171 * 0.51244 * 16 15 14 18 18 Si 1.86806 * 119.87660 * 179.76700 * 17 16 15 19 19 C 1.86299 * 109.46869 * 269.97521 * 18 17 16 20 20 C 1.86299 * 109.46870 * 29.97847 * 18 17 16 21 21 C 1.86300 * 109.47021 * 149.97652 * 18 17 16 22 22 C 1.38330 * 120.25043 * 359.74142 * 17 16 15 23 23 C 1.38007 * 120.12105 * 359.97438 * 22 17 16 24 24 C 1.39036 * 120.01541 * 180.02562 * 3 2 1 25 25 O 1.35942 * 120.13496 * 359.96418 * 24 3 2 26 26 C 1.42894 * 117.00650 * 89.99626 * 25 24 3 27 27 F 1.39906 * 109.46999 * 300.00064 * 26 25 24 28 28 F 1.39903 * 109.47325 * 59.99549 * 26 25 24 29 29 H 1.09000 * 109.47464 * 60.00463 * 1 2 3 30 30 H 1.09004 * 109.47247 * 179.97438 * 1 2 3 31 31 H 1.09000 * 109.47562 * 299.99586 * 1 2 3 32 32 H 1.07999 * 119.87583 * 0.03901 * 4 3 2 33 33 H 1.08999 * 109.47358 * 240.00057 * 6 5 4 34 34 H 0.96700 * 114.00311 * 300.00591 * 7 6 5 35 35 H 1.08003 * 119.98364 * 179.72388 * 12 5 4 36 36 H 1.07998 * 120.06522 * 0.02967 * 15 14 13 37 37 H 1.08004 * 119.94073 * 180.28308 * 16 15 14 38 38 H 1.09001 * 109.46628 * 60.00274 * 19 18 17 39 39 H 1.09006 * 109.46830 * 179.97438 * 19 18 17 40 40 H 1.08993 * 109.47194 * 300.00293 * 19 18 17 41 41 H 1.08994 * 109.47497 * 59.99931 * 20 18 17 42 42 H 1.09000 * 109.46780 * 180.02562 * 20 18 17 43 43 H 1.09003 * 109.47178 * 299.99772 * 20 18 17 44 44 H 1.09003 * 109.47219 * 60.00216 * 21 18 17 45 45 H 1.08999 * 109.47175 * 179.97438 * 21 18 17 46 46 H 1.08994 * 109.47088 * 299.99911 * 21 18 17 47 47 H 1.07994 * 119.93824 * 179.97438 * 22 17 16 48 48 H 1.07997 * 120.06243 * 180.02562 * 23 22 17 49 49 H 1.08996 * 109.47601 * 179.97438 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0464 1.2118 0.0000 4 6 1.2919 2.3741 0.0005 5 6 1.9151 3.6097 0.0000 6 6 1.0861 4.8682 0.0000 7 8 1.3871 5.6368 1.1665 8 14 -0.7224 4.4206 0.0016 9 1 -1.5392 5.6607 0.0022 10 1 -1.0355 3.6216 -1.2103 11 1 -1.0337 3.6226 1.2147 12 6 3.2922 3.6941 -0.0063 13 6 4.0624 2.5322 -0.0015 14 6 5.5431 2.6205 -0.0027 15 6 6.2878 1.8933 0.9240 16 6 7.6654 1.9755 0.9153 17 6 8.3066 2.7861 -0.0040 18 14 10.1714 2.8973 -0.0054 19 6 10.7119 4.2780 1.1226 20 6 10.8899 1.2869 0.5955 21 6 10.7719 3.2379 -1.7358 22 6 7.5723 3.5142 -0.9227 23 6 6.1945 3.4351 -0.9269 24 6 3.4348 1.2850 -0.0005 25 8 4.1782 0.1468 -0.0003 26 6 4.5325 -0.3970 -1.2734 27 9 3.3703 -0.7073 -1.9877 28 9 5.2830 0.5420 -1.9891 29 1 -0.3634 0.5137 -0.8900 30 1 -0.3634 -1.0277 -0.0005 31 1 -0.3634 0.5138 0.8900 32 1 0.2135 2.3155 0.0016 33 1 1.3150 5.4540 -0.8902 34 1 1.2074 5.1767 1.9979 35 1 3.7736 4.6609 -0.0112 36 1 5.7880 1.2632 1.6449 37 1 8.2438 1.4088 1.6300 38 1 10.3606 4.0786 2.1349 39 1 11.8001 4.3426 1.1221 40 1 10.2914 5.2200 0.7710 41 1 10.5736 0.4792 -0.0644 42 1 11.9780 1.3520 0.5951 43 1 10.5386 1.0876 1.6079 44 1 10.3514 4.1802 -2.0874 45 1 11.8599 3.3033 -1.7366 46 1 10.4556 2.4302 -2.3957 47 1 8.0781 4.1458 -1.6379 48 1 5.6222 4.0037 -1.6449 49 1 5.1239 -1.3013 -1.1303 RHF calculation, no. of doubly occupied orbitals= 68 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_271570_17507730_12419814.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 09:10:06 Heat of formation + Delta-G solvation = -206.621848 kcal Electronic energy + Delta-G solvation = -34301.877883 eV Core-core repulsion = 29567.440040 eV Total energy + Delta-G solvation = -4734.437842 eV No. of doubly occupied orbitals = 68 Molecular weight (most abundant/longest-lived isotopes) = 382.137 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -49.90423 -48.02102 -41.83426 -39.96055 -39.00006 -38.92683 -37.02708 -33.55265 -31.87762 -31.56943 -30.01299 -29.35572 -28.56876 -28.41266 -28.37938 -27.54760 -25.72432 -24.30639 -23.46885 -22.63210 -21.60847 -20.03138 -19.17101 -19.01670 -18.70335 -17.83959 -17.46535 -17.38088 -16.98698 -16.71785 -16.22675 -16.18033 -15.77466 -15.73153 -15.27724 -15.12918 -14.77759 -14.59590 -14.41942 -14.38243 -14.24251 -14.15615 -14.05666 -13.93959 -13.80881 -13.62321 -13.51043 -13.29683 -13.23226 -13.20140 -13.07308 -13.05956 -12.93304 -12.88934 -12.36681 -12.26977 -12.16802 -11.92984 -11.90243 -11.72546 -11.02983 -10.87282 -10.78573 -10.56548 -10.19824 -9.69097 -9.34416 -9.17354 -0.39488 0.08183 0.59079 0.66412 1.00870 1.30074 1.37807 1.75853 1.78732 1.86315 1.88642 1.98769 2.09479 2.54847 2.58543 2.73826 3.04703 3.30387 3.40700 3.50870 3.63143 3.79009 3.88126 4.02698 4.08300 4.10438 4.14664 4.18573 4.25254 4.30269 4.47024 4.51133 4.60536 4.70428 4.73411 4.74496 4.77688 4.78315 4.79126 4.79912 4.85176 5.02078 5.09719 5.22557 5.29058 5.34805 5.46096 5.53746 5.55445 5.57020 5.70543 5.71570 5.79764 6.20458 6.29552 6.43811 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.021 3.979 2 O -0.298 6.298 3 C 0.142 3.858 4 C -0.211 4.211 5 C -0.070 4.070 6 C -0.081 4.081 7 O -0.534 6.534 8 Si 0.943 3.057 9 H -0.248 1.248 10 H -0.249 1.249 11 H -0.250 1.250 12 C -0.108 4.108 13 C -0.002 4.002 14 C -0.042 4.042 15 C -0.100 4.100 16 C -0.091 4.091 17 C -0.363 4.363 18 Si 1.058 2.942 19 C -0.449 4.449 20 C -0.449 4.449 21 C -0.449 4.449 22 C -0.089 4.089 23 C -0.105 4.105 24 C 0.048 3.952 25 O -0.314 6.314 26 C 0.404 3.596 27 F -0.200 7.200 28 F -0.199 7.199 29 H 0.058 0.942 30 H 0.108 0.892 31 H 0.058 0.942 32 H 0.133 0.867 33 H 0.124 0.876 34 H 0.378 0.622 35 H 0.141 0.859 36 H 0.123 0.877 37 H 0.122 0.878 38 H 0.069 0.931 39 H 0.070 0.930 40 H 0.069 0.931 41 H 0.070 0.930 42 H 0.071 0.929 43 H 0.069 0.931 44 H 0.069 0.931 45 H 0.071 0.929 46 H 0.070 0.930 47 H 0.122 0.878 48 H 0.120 0.880 49 H 0.172 0.828 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.139 -0.554 0.535 0.783 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.074 4.074 2 O -0.210 6.210 3 C 0.095 3.905 4 C -0.229 4.229 5 C -0.070 4.070 6 C -0.192 4.192 7 O -0.339 6.339 8 Si 0.765 3.235 9 H -0.172 1.172 10 H -0.173 1.173 11 H -0.173 1.173 12 C -0.126 4.126 13 C -0.003 4.003 14 C -0.042 4.042 15 C -0.118 4.118 16 C -0.109 4.109 17 C -0.405 4.405 18 Si 1.250 2.750 19 C -0.556 4.556 20 C -0.557 4.557 21 C -0.557 4.557 22 C -0.107 4.107 23 C -0.123 4.123 24 C 0.005 3.995 25 O -0.233 6.233 26 C 0.315 3.685 27 F -0.182 7.182 28 F -0.181 7.181 29 H 0.076 0.924 30 H 0.126 0.874 31 H 0.076 0.924 32 H 0.151 0.849 33 H 0.142 0.858 34 H 0.225 0.775 35 H 0.159 0.841 36 H 0.141 0.859 37 H 0.140 0.860 38 H 0.088 0.912 39 H 0.089 0.911 40 H 0.088 0.912 41 H 0.089 0.911 42 H 0.090 0.910 43 H 0.088 0.912 44 H 0.088 0.912 45 H 0.090 0.910 46 H 0.089 0.911 47 H 0.140 0.860 48 H 0.138 0.862 49 H 0.188 0.812 Dipole moment (debyes) X Y Z Total from point charges -0.792 -0.623 0.200 1.027 hybrid contribution -0.329 -0.223 0.040 0.399 sum -1.121 -0.845 0.241 1.424 Atomic orbital electron populations 1.23212 0.77887 1.04820 1.01497 1.86207 1.21630 1.25391 1.87778 1.19043 0.90981 0.85115 0.95370 1.21056 0.99921 0.91726 1.10231 1.20121 0.94684 0.94253 0.97949 1.25008 1.08986 0.92719 0.92454 1.86538 1.89533 1.42584 1.15215 0.85775 0.74984 0.80900 0.81804 1.17185 1.17295 1.17316 1.20912 0.92189 0.97845 1.01663 1.18942 0.93040 0.91219 0.97101 1.18511 0.89982 0.98549 0.97204 1.21286 0.94169 0.98198 0.98159 1.20994 0.93880 0.97857 0.98132 1.27422 1.17056 0.98697 0.97291 0.78203 0.62132 0.67372 0.67332 1.26122 1.05642 1.13386 1.10478 1.26130 1.06858 1.16530 1.06157 1.26135 1.06142 1.05084 1.18349 1.20967 0.93364 0.98337 0.98035 1.21214 0.94941 0.98122 0.97996 1.17719 0.86127 0.85431 1.10254 1.86706 1.69697 1.39411 1.27486 1.23550 0.79358 0.89597 0.76040 1.93098 1.52464 1.93100 1.79549 1.93113 1.76405 1.69064 1.79482 0.92382 0.87401 0.92374 0.84935 0.85823 0.77483 0.84136 0.85932 0.86012 0.91167 0.91102 0.91159 0.91068 0.91014 0.91166 0.91178 0.91021 0.91058 0.86011 0.86243 0.81193 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.02 9.81 101.05 0.99 0.97 16 2 O -0.30 -0.84 9.73 -34.32 -0.33 -1.17 16 3 C 0.14 0.43 6.44 -39.16 -0.25 0.18 16 4 C -0.21 -0.28 7.66 -39.41 -0.30 -0.59 16 5 C -0.07 -0.06 5.38 -104.67 -0.56 -0.62 16 6 C -0.08 0.05 2.82 36.00 0.10 0.16 16 7 O -0.53 0.05 12.77 -35.23 -0.45 -0.40 16 8 Si 0.94 -0.86 25.06 -169.99 -4.26 -5.12 16 9 H -0.25 -0.09 7.11 56.52 0.40 0.31 16 10 H -0.25 0.13 7.11 56.52 0.40 0.53 16 11 H -0.25 0.24 7.11 56.52 0.40 0.65 16 12 C -0.11 -0.17 9.06 -39.25 -0.36 -0.53 16 13 C 0.00 -0.01 5.34 -104.79 -0.56 -0.57 16 14 C -0.04 -0.11 3.96 -104.91 -0.42 -0.53 16 15 C -0.10 -0.22 8.78 -39.25 -0.34 -0.56 16 16 C -0.09 -0.08 9.28 -39.63 -0.37 -0.45 16 17 C -0.36 -0.10 4.60 -39.52 -0.18 -0.28 16 18 Si 1.06 -2.28 12.31 -169.99 -2.09 -4.37 16 19 C -0.45 0.53 8.65 101.05 0.87 1.41 16 20 C -0.45 0.70 8.52 101.05 0.86 1.56 16 21 C -0.45 0.64 8.52 101.05 0.86 1.51 16 22 C -0.09 -0.08 9.28 -39.63 -0.37 -0.45 16 23 C -0.10 -0.20 9.51 -39.25 -0.37 -0.58 16 24 C 0.05 0.17 5.25 -38.77 -0.20 -0.03 16 25 O -0.31 -0.97 8.50 -34.13 -0.29 -1.26 16 26 C 0.40 0.66 6.35 101.05 0.64 1.30 16 27 F -0.20 -0.70 16.46 2.25 0.04 -0.66 16 28 F -0.20 -0.64 15.77 2.25 0.04 -0.60 16 29 H 0.06 -0.09 7.66 -51.93 -0.40 -0.49 16 30 H 0.11 -0.27 8.14 -51.93 -0.42 -0.69 16 31 H 0.06 -0.11 7.66 -51.93 -0.40 -0.51 16 32 H 0.13 -0.03 3.08 -52.49 -0.16 -0.20 16 33 H 0.12 -0.20 7.96 -51.93 -0.41 -0.62 16 34 H 0.38 -1.19 8.70 45.56 0.40 -0.80 16 35 H 0.14 0.11 8.04 -52.48 -0.42 -0.31 16 36 H 0.12 0.23 7.70 -52.49 -0.40 -0.17 16 37 H 0.12 -0.13 7.40 -52.48 -0.39 -0.52 16 38 H 0.07 -0.06 7.96 -51.93 -0.41 -0.48 16 39 H 0.07 -0.10 7.96 -51.93 -0.41 -0.51 16 40 H 0.07 -0.06 7.96 -51.93 -0.41 -0.48 16 41 H 0.07 -0.09 7.96 -51.93 -0.41 -0.51 16 42 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 43 H 0.07 -0.12 7.67 -51.93 -0.40 -0.52 16 44 H 0.07 -0.11 7.67 -51.93 -0.40 -0.51 16 45 H 0.07 -0.11 7.96 -51.93 -0.41 -0.53 16 46 H 0.07 -0.08 7.96 -51.93 -0.41 -0.49 16 47 H 0.12 -0.12 7.40 -52.49 -0.39 -0.51 16 48 H 0.12 0.11 8.04 -52.49 -0.42 -0.31 16 49 H 0.17 -0.43 8.14 -51.93 -0.42 -0.86 16 LS Contribution 412.13 15.07 6.21 6.21 Total: 0.00 -7.09 412.13 -7.43 -14.52 By element: Atomic # 1 Polarization: -2.72 SS G_CDS: -6.33 Total: -9.05 kcal Atomic # 6 Polarization: 1.86 SS G_CDS: 0.04 Total: 1.90 kcal Atomic # 8 Polarization: -1.75 SS G_CDS: -1.07 Total: -2.83 kcal Atomic # 9 Polarization: -1.34 SS G_CDS: 0.07 Total: -1.27 kcal Atomic # 14 Polarization: -3.14 SS G_CDS: -6.35 Total: -9.49 kcal Total LS contribution 6.21 Total: 6.21 kcal Total: -7.09 -7.43 -14.52 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_271570_17507730_12419814.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -192.103 kcal (2) G-P(sol) polarization free energy of solvation -7.091 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -199.194 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.428 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.519 kcal (6) G-S(sol) free energy of system = (1) + (5) -206.622 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.03 seconds