Wall clock time and date at job start Mon Mar 8 2021 09:20:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86305 * 1 3 3 C 1.86300 * 109.47156 * 2 1 4 4 C 1.86292 * 109.47295 * 239.99412 * 2 1 3 5 5 C 1.86801 * 109.46978 * 119.99474 * 2 1 3 6 6 C 1.38324 * 119.87522 * 89.99808 * 5 2 1 7 7 C 1.38025 * 120.12088 * 179.97438 * 6 5 2 8 8 C 1.39333 * 119.87559 * 0.02562 * 7 6 5 9 9 C 1.48378 * 120.11918 * 179.97438 * 8 7 6 10 10 C 1.39311 * 120.12800 * 130.00408 * 9 8 7 11 11 C 1.38040 * 119.89181 * 180.02562 * 10 9 8 12 12 C 1.38312 * 120.14824 * 359.97438 * 11 10 9 13 13 C 1.50698 * 119.87305 * 180.02562 * 12 11 10 14 14 O 1.42895 * 109.47080 * 300.00125 * 13 12 11 15 15 Si 1.86296 * 109.47229 * 179.97438 * 13 12 11 16 16 H 1.48499 * 109.47174 * 60.00094 * 15 13 12 17 17 H 1.48498 * 109.47146 * 179.97438 * 15 13 12 18 18 H 1.48497 * 109.47269 * 299.99862 * 15 13 12 19 19 C 1.38319 * 120.25702 * 0.02562 * 12 11 10 20 20 C 1.38125 * 120.10785 * 359.72014 * 19 12 11 21 21 Cl 1.73595 * 120.07663 * 180.27397 * 20 19 12 22 22 C 1.39342 * 119.76240 * 359.96000 * 8 7 6 23 23 C 1.38024 * 119.87226 * 0.05952 * 22 8 7 24 24 H 1.08996 * 109.46898 * 300.00376 * 1 2 3 25 25 H 1.08996 * 109.46706 * 60.00497 * 1 2 3 26 26 H 1.09000 * 109.46783 * 180.02562 * 1 2 3 27 27 H 1.09002 * 109.46915 * 179.97438 * 3 2 1 28 28 H 1.09006 * 109.46904 * 299.99375 * 3 2 1 29 29 H 1.09000 * 109.47178 * 59.99683 * 3 2 1 30 30 H 1.09001 * 109.47303 * 300.00641 * 4 2 1 31 31 H 1.09006 * 109.46907 * 59.99894 * 4 2 1 32 32 H 1.08998 * 109.47629 * 179.97438 * 4 2 1 33 33 H 1.08005 * 119.94013 * 359.97438 * 6 5 2 34 34 H 1.08001 * 120.05780 * 179.72479 * 7 6 5 35 35 H 1.07999 * 120.05276 * 359.97438 * 10 9 8 36 36 H 1.07997 * 119.92510 * 180.02562 * 11 10 9 37 37 H 1.09005 * 109.46724 * 59.99875 * 13 12 11 38 38 H 0.96702 * 114.00318 * 300.00127 * 14 13 12 39 39 H 1.07999 * 119.94568 * 179.97438 * 19 12 11 40 40 H 1.08002 * 120.06716 * 180.02562 * 22 8 7 41 41 H 1.08003 * 119.93423 * 179.97438 * 23 22 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.4841 1.7564 0.0000 4 6 2.4841 -0.8783 -1.5210 5 6 2.4857 -0.8805 1.5253 6 6 2.7153 -2.2440 1.4883 7 6 3.1758 -2.8996 2.6122 8 6 3.4089 -2.1854 3.7857 9 6 3.9035 -2.8848 4.9972 10 6 5.0068 -2.3898 5.6890 11 6 5.4631 -3.0447 6.8152 12 6 4.8271 -4.1902 7.2582 13 6 5.3301 -4.8999 8.4888 14 8 6.6826 -5.3120 8.2816 15 14 4.2688 -6.3944 8.8213 16 1 4.3324 -7.3154 7.6581 17 1 4.7649 -7.0940 10.0335 18 1 2.8636 -5.9656 9.0369 19 6 3.7312 -4.6871 6.5761 20 6 3.2624 -4.0373 5.4509 21 17 1.8826 -4.6576 4.5996 22 6 3.1762 -0.8119 3.8172 23 6 2.7153 -0.1666 2.6875 24 1 -0.3633 0.5139 0.8899 25 1 -0.3632 0.5137 -0.8900 26 1 -0.3633 -1.0277 0.0005 27 1 3.5741 1.7564 0.0005 28 1 2.1208 2.2702 -0.8901 29 1 2.1207 2.2703 0.8900 30 1 2.1207 -1.9060 -1.5210 31 1 2.1207 -0.3646 -2.4110 32 1 3.5741 -0.8780 -1.5212 33 1 2.5339 -2.7967 0.5783 34 1 3.3505 -3.9650 2.5835 35 1 5.5047 -1.4956 5.3441 36 1 6.3181 -2.6612 7.3521 37 1 5.2830 -4.2240 9.3427 38 1 6.7998 -5.9163 7.5358 39 1 3.2386 -5.5822 6.9262 40 1 3.3556 -0.2534 4.7240 41 1 2.5342 0.8979 2.7110 RHF calculation, no. of doubly occupied orbitals= 53 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_271570_17507730_13286580.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 09:20:37 Heat of formation + Delta-G solvation = -40.683960 kcal Electronic energy + Delta-G solvation = -21482.324448 eV Core-core repulsion = 18282.629993 eV Total energy + Delta-G solvation = -3199.694455 eV No. of doubly occupied orbitals = 53 Molecular weight (most abundant/longest-lived isotopes) = 320.087 amu Computer time = 0.56 seconds Orbital eigenvalues (eV) -41.08052 -39.58050 -37.90119 -37.22331 -33.92686 -32.13208 -31.71472 -30.57821 -29.49212 -28.44873 -28.41163 -26.70315 -24.30313 -23.42795 -22.99172 -21.76328 -18.88263 -18.11154 -17.20173 -16.67448 -16.56491 -16.19873 -15.75186 -15.68251 -15.51156 -14.81536 -14.58616 -14.48200 -14.22198 -14.18566 -14.08203 -13.82991 -13.71065 -13.52706 -13.27233 -13.24653 -13.10667 -12.83269 -12.73004 -12.49756 -12.43169 -12.22597 -12.01159 -11.79110 -11.68795 -11.06303 -10.90870 -10.80518 -10.57153 -10.24937 -9.89468 -9.74906 -9.20616 -0.31860 0.08187 0.51855 0.58746 1.05175 1.09899 1.36945 1.44437 1.71477 1.84892 1.84922 1.94676 2.41560 2.54636 2.96121 3.30678 3.43617 3.56164 3.75010 4.01757 4.08659 4.13912 4.24085 4.41127 4.44501 4.53437 4.65212 4.69717 4.70514 4.71557 4.74777 4.75397 4.75992 4.76743 4.88245 5.02700 5.11363 5.22144 5.27821 5.41798 5.47385 5.50099 5.53922 5.63774 5.64850 5.66196 6.13119 6.43894 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.449 4.449 2 Si 1.058 2.942 3 C -0.449 4.449 4 C -0.449 4.449 5 C -0.363 4.363 6 C -0.089 4.089 7 C -0.104 4.104 8 C -0.048 4.048 9 C -0.031 4.031 10 C -0.094 4.094 11 C -0.083 4.083 12 C -0.108 4.108 13 C -0.078 4.078 14 O -0.536 6.536 15 Si 0.941 3.059 16 H -0.249 1.249 17 H -0.250 1.250 18 H -0.248 1.248 19 C -0.116 4.116 20 C -0.022 4.022 21 Cl -0.057 7.057 22 C -0.111 4.111 23 C -0.090 4.090 24 H 0.069 0.931 25 H 0.070 0.930 26 H 0.069 0.931 27 H 0.070 0.930 28 H 0.071 0.929 29 H 0.069 0.931 30 H 0.069 0.931 31 H 0.071 0.929 32 H 0.070 0.930 33 H 0.122 0.878 34 H 0.121 0.879 35 H 0.137 0.863 36 H 0.138 0.862 37 H 0.123 0.877 38 H 0.378 0.622 39 H 0.132 0.868 40 H 0.121 0.879 41 H 0.123 0.877 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.467 1.208 -0.935 1.597 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.557 4.557 2 Si 1.250 2.750 3 C -0.557 4.557 4 C -0.557 4.557 5 C -0.405 4.405 6 C -0.107 4.107 7 C -0.122 4.122 8 C -0.048 4.048 9 C -0.032 4.032 10 C -0.112 4.112 11 C -0.101 4.101 12 C -0.109 4.109 13 C -0.189 4.189 14 O -0.341 6.341 15 Si 0.763 3.237 16 H -0.172 1.172 17 H -0.173 1.173 18 H -0.171 1.171 19 C -0.134 4.134 20 C -0.049 4.049 21 Cl -0.027 7.027 22 C -0.129 4.129 23 C -0.108 4.108 24 H 0.088 0.912 25 H 0.089 0.911 26 H 0.088 0.912 27 H 0.090 0.910 28 H 0.090 0.910 29 H 0.088 0.912 30 H 0.088 0.912 31 H 0.090 0.910 32 H 0.090 0.910 33 H 0.140 0.860 34 H 0.139 0.861 35 H 0.155 0.845 36 H 0.156 0.844 37 H 0.141 0.859 38 H 0.225 0.775 39 H 0.150 0.850 40 H 0.139 0.861 41 H 0.141 0.859 Dipole moment (debyes) X Y Z Total from point charges -0.063 0.769 -0.273 0.818 hybrid contribution 0.023 -0.121 -0.445 0.462 sum -0.040 0.648 -0.718 0.968 Atomic orbital electron populations 1.26124 1.20494 1.04577 1.04467 0.78201 0.66885 0.66139 0.63787 1.26131 1.06452 1.18538 1.04555 1.26135 1.06462 1.08057 1.15066 1.27439 1.03417 0.99460 1.10183 1.21002 0.97465 0.94585 0.97652 1.21317 0.98742 0.99670 0.92431 1.18630 1.00537 0.93488 0.92187 1.18752 0.95598 0.93578 0.95228 1.21292 0.95125 1.00064 0.94756 1.21073 0.99342 0.93916 0.95732 1.20324 0.95822 0.96994 0.97758 1.24957 0.90001 1.06519 0.97414 1.86527 1.24408 1.68207 1.54951 0.85792 0.78858 0.77348 0.81713 1.17206 1.17345 1.17143 1.20883 0.97278 1.00416 0.94819 1.20875 0.92228 0.96113 0.95672 1.98392 1.41242 1.86457 1.76647 1.21243 0.99720 0.93131 0.98774 1.20995 0.97528 0.99669 0.92562 0.91172 0.91060 0.91183 0.91050 0.90968 0.91172 0.91176 0.90974 0.91047 0.85980 0.86117 0.84497 0.84426 0.85945 0.77494 0.85035 0.86113 0.85931 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 0.56 8.65 101.05 0.87 1.43 16 2 Si 1.06 -2.51 12.31 -169.99 -2.09 -4.60 16 3 C -0.45 0.81 8.52 101.05 0.86 1.67 16 4 C -0.45 0.75 8.52 101.05 0.86 1.61 16 5 C -0.36 0.01 4.60 -39.52 -0.18 -0.17 16 6 C -0.09 -0.07 9.28 -39.63 -0.37 -0.43 16 7 C -0.10 -0.18 8.19 -39.25 -0.32 -0.50 16 8 C -0.05 -0.09 5.10 -104.90 -0.54 -0.63 16 9 C -0.03 -0.05 5.48 -104.86 -0.57 -0.62 16 10 C -0.09 -0.02 9.51 -39.26 -0.37 -0.40 16 11 C -0.08 0.02 9.59 -39.63 -0.38 -0.36 16 12 C -0.11 0.00 5.39 -104.57 -0.56 -0.57 16 13 C -0.08 0.08 2.82 36.00 0.10 0.18 16 14 O -0.54 0.23 12.76 -35.23 -0.45 -0.22 16 15 Si 0.94 -0.65 25.06 -169.99 -4.26 -4.91 16 16 H -0.25 0.09 7.11 56.52 0.40 0.50 16 17 H -0.25 -0.16 7.11 56.52 0.40 0.24 16 18 H -0.25 -0.01 7.11 56.52 0.40 0.39 16 19 C -0.12 -0.11 8.44 -39.59 -0.33 -0.45 16 20 C -0.02 -0.04 6.28 -39.16 -0.25 -0.29 16 21 Cl -0.06 -0.12 26.00 -51.86 -1.35 -1.47 16 22 C -0.11 -0.12 9.51 -39.25 -0.37 -0.50 16 23 C -0.09 -0.03 9.28 -39.63 -0.37 -0.40 16 24 H 0.07 -0.07 7.96 -51.93 -0.41 -0.48 16 25 H 0.07 -0.11 7.96 -51.93 -0.41 -0.52 16 26 H 0.07 -0.06 7.96 -51.93 -0.41 -0.48 16 27 H 0.07 -0.11 7.96 -51.93 -0.41 -0.52 16 28 H 0.07 -0.14 7.96 -51.93 -0.41 -0.55 16 29 H 0.07 -0.14 7.67 -51.93 -0.40 -0.54 16 30 H 0.07 -0.12 7.67 -51.93 -0.40 -0.52 16 31 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 32 H 0.07 -0.10 7.96 -51.93 -0.41 -0.51 16 33 H 0.12 -0.13 7.40 -52.48 -0.39 -0.52 16 34 H 0.12 0.16 7.17 -52.49 -0.38 -0.21 16 35 H 0.14 -0.17 8.04 -52.49 -0.42 -0.59 16 36 H 0.14 -0.19 8.06 -52.49 -0.42 -0.62 16 37 H 0.12 -0.24 7.96 -51.93 -0.41 -0.66 16 38 H 0.38 -1.30 8.70 45.56 0.40 -0.90 16 39 H 0.13 0.02 4.86 -52.49 -0.26 -0.24 16 40 H 0.12 -0.03 8.04 -52.49 -0.42 -0.45 16 41 H 0.12 -0.20 7.40 -52.48 -0.39 -0.59 16 LS Contribution 355.34 15.07 5.35 5.35 Total: 0.00 -4.68 355.34 -9.89 -14.58 By element: Atomic # 1 Polarization: -3.13 SS G_CDS: -5.18 Total: -8.31 kcal Atomic # 6 Polarization: 1.50 SS G_CDS: -1.92 Total: -0.42 kcal Atomic # 8 Polarization: 0.23 SS G_CDS: -0.45 Total: -0.22 kcal Atomic # 14 Polarization: -3.16 SS G_CDS: -6.35 Total: -9.51 kcal Atomic # 17 Polarization: -0.12 SS G_CDS: -1.35 Total: -1.47 kcal Total LS contribution 5.35 Total: 5.35 kcal Total: -4.68 -9.89 -14.58 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_271570_17507730_13286580.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -26.107 kcal (2) G-P(sol) polarization free energy of solvation -4.683 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -30.789 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.895 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.577 kcal (6) G-S(sol) free energy of system = (1) + (5) -40.684 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.56 seconds