Wall clock time and date at job start Mon Mar 8 2021 06:09:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86300 * 109.47032 * 2 1 4 4 H 1.48494 * 109.47258 * 180.02562 * 3 2 1 5 5 H 1.48504 * 109.47172 * 300.00261 * 3 2 1 6 6 H 1.48495 * 109.47172 * 60.00210 * 3 2 1 7 7 C 1.50697 * 109.47206 * 119.99937 * 2 1 3 8 8 C 1.38007 * 120.04877 * 254.64696 * 7 2 1 9 9 C 1.38322 * 120.13279 * 180.02562 * 8 7 2 10 10 C 1.38418 * 120.23321 * 359.97438 * 9 8 7 11 11 Cl 1.73594 * 119.95063 * 180.02562 * 10 9 8 12 12 C 1.38154 * 120.09356 * 0.02562 * 10 9 8 13 13 C 1.39302 * 119.86407 * 359.77191 * 12 10 9 14 14 C 1.48398 * 120.11336 * 179.97438 * 13 12 10 15 15 C 1.39321 * 120.12130 * 57.01202 * 14 13 12 16 16 C 1.38033 * 119.87831 * 180.02562 * 15 14 13 17 Xx 1.80995 * 119.94068 * 179.97438 * 16 15 14 18 17 F 7.90164 * 56.35061 * 180.95818 * 2 1 3 19 18 F 1.61000 * 90.00361 * 134.99997 * 17 16 15 20 19 F 1.61003 * 90.00215 * 314.99816 * 17 16 15 21 20 F 1.61003 * 90.00238 * 224.99781 * 17 16 15 22 21 F 1.60997 * 90.00181 * 44.99975 * 17 16 15 23 22 C 1.38302 * 120.11779 * 359.97436 * 16 15 14 24 23 C 1.38337 * 120.24731 * 0.02562 * 23 16 15 25 24 C 1.38005 * 120.12111 * 359.71890 * 24 23 16 26 25 H 0.96701 * 113.99723 * 60.00168 * 1 2 3 27 26 H 1.08996 * 109.46783 * 240.00312 * 2 1 3 28 27 H 1.07998 * 119.92868 * 359.97438 * 8 7 2 29 28 H 1.08002 * 119.88214 * 179.97438 * 9 8 7 30 29 H 1.07995 * 120.06984 * 179.97438 * 12 10 9 31 30 H 1.07996 * 120.05779 * 359.97438 * 15 14 13 32 31 H 1.08005 * 119.87589 * 180.02562 * 23 16 15 33 32 H 1.08001 * 119.94058 * 179.97438 * 24 23 16 34 33 H 1.07995 * 120.06050 * 180.02562 * 25 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 1 3.5350 1.7565 -0.0006 5 1 1.5549 2.4565 -1.2125 6 1 1.5551 2.4565 1.2125 7 6 1.9314 -0.7104 1.2304 8 6 2.4599 0.0142 2.2793 9 6 2.9220 -0.6361 3.4093 10 6 2.8567 -2.0161 3.4951 11 17 3.4381 -2.8246 4.9169 12 6 2.3294 -2.7508 2.4506 13 6 1.8590 -2.0997 1.3125 14 6 1.2920 -2.8835 0.1872 15 6 0.2173 -3.7428 0.4052 16 6 -0.3058 -4.4698 -0.6451 17 9 -2.9493 -6.5768 -0.1100 18 9 -2.4186 -5.0261 -1.6916 19 9 -0.9848 -6.1483 0.9642 20 9 -0.9692 -6.7227 -1.2390 21 9 -2.4342 -4.4516 0.5116 22 6 0.2347 -4.3460 -1.9121 23 6 1.3019 -3.4943 -2.1342 24 6 1.8294 -2.7587 -1.0925 25 1 -0.3933 0.4417 -0.7651 26 1 1.7923 -0.5138 -0.8900 27 1 2.5136 1.0911 2.2173 28 1 3.3353 -0.0651 4.2276 29 1 2.2790 -3.8275 2.5178 30 1 -0.2053 -3.8404 1.3942 31 1 -0.1779 -4.9165 -2.7311 32 1 1.7205 -3.4018 -3.1255 33 1 2.6623 -2.0938 -1.2671 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. SCF OSCILLATION -- NSTAR INDEX INCREASED BY ONE SCF OSCILLATION -- NSTAR INDEX INCREASED BY ONE CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_271570_18313394_11652148.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:09:12 Heat of formation + Delta-G solvation = 389.710319 kcal Electronic energy + Delta-G solvation = -27724.014642 eV Core-core repulsion = 22718.716869 eV Total energy + Delta-G solvation = -5005.297773 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 342.031 amu Computer time = 20.41 seconds Orbital eigenvalues (eV) -44.38228 -44.23643 -44.19121 -44.09382 -43.52872 -41.75995 -40.09493 -37.96222 -37.24713 -34.34106 -32.97764 -32.33090 -30.66921 -26.95516 -25.22085 -23.75258 -23.10919 -22.00415 -18.78377 -18.45068 -17.95083 -17.38367 -16.88140 -16.72701 -15.81551 -15.69562 -15.35082 -15.23726 -15.20632 -15.08295 -14.90567 -14.74943 -14.65094 -14.42487 -14.18372 -14.17911 -14.15352 -14.01168 -13.89738 -13.75041 -13.61659 -13.59585 -13.45485 -13.22816 -12.77782 -12.59917 -12.30917 -12.27167 -12.10483 -11.97228 -11.92495 -11.69262 -11.39397 -10.91898 -10.82178 -10.26143 -10.08428 -9.74001 -5.25775 -4.80392 -3.11296 -0.81242 -0.61137 -0.13866 0.06871 1.00714 1.16556 1.52529 1.57505 1.87317 1.99269 2.25644 2.62212 2.85935 3.31150 3.34479 3.37465 3.58083 3.63186 3.79178 3.87356 3.96670 4.09675 4.25965 4.32524 4.42599 4.52587 4.56559 4.73419 4.79778 4.89784 5.01408 5.09007 5.13760 5.47157 6.82516 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.558 6.558 2 C -0.089 4.089 3 Si 0.961 3.039 4 H -0.245 1.245 5 H -0.254 1.254 6 H -0.273 1.273 7 C -0.046 4.046 8 C -0.114 4.114 9 C -0.090 4.090 10 C -0.042 4.042 11 Cl -0.068 7.068 12 C -0.093 4.093 13 C -0.031 4.031 14 C 0.025 3.975 15 C -0.112 4.112 16 C 0.329 3.671 17 F -0.221 7.221 18 F -0.158 7.158 19 F -0.166 7.166 20 F -0.154 7.154 21 F -0.166 7.166 22 C -0.109 4.109 23 C -0.020 4.020 24 C -0.076 4.076 25 H 0.401 0.599 26 H 0.117 0.883 27 H 0.150 0.850 28 H 0.155 0.845 29 H 0.147 0.853 30 H 0.162 0.838 31 H 0.188 0.812 32 H 0.236 0.764 33 H 0.212 0.788 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 12.237 10.713 -6.843 17.645 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.367 6.367 2 C -0.199 4.199 3 Si 0.785 3.215 4 H -0.169 1.169 5 H -0.177 1.177 6 H -0.199 1.199 7 C -0.046 4.046 8 C -0.131 4.131 9 C -0.108 4.108 10 C -0.069 4.069 11 Cl -0.039 7.039 12 C -0.112 4.112 13 C -0.032 4.032 14 C 0.025 3.975 15 C -0.129 4.129 16 C 0.324 3.676 17 F -0.220 7.220 18 F -0.157 7.157 19 F -0.164 7.164 20 F -0.153 7.153 21 F -0.165 7.165 22 C -0.126 4.126 23 C -0.036 4.036 24 C -0.092 4.092 25 H 0.252 0.748 26 H 0.135 0.865 27 H 0.167 0.833 28 H 0.173 0.827 29 H 0.164 0.836 30 H 0.180 0.820 31 H 0.205 0.795 32 H 0.252 0.748 33 H 0.229 0.771 Dipole moment (debyes) X Y Z Total from point charges 12.715 11.197 -6.169 18.031 hybrid contribution -1.856 -1.418 0.720 2.444 sum 10.860 9.780 -5.449 15.597 Atomic orbital electron populations 1.86526 1.16699 1.82114 1.51388 1.24936 0.86435 1.10485 0.98055 0.85499 0.80538 0.75093 0.80351 1.16875 1.17743 1.19866 1.19575 0.97192 0.91873 0.95972 1.21245 0.98404 1.01085 0.92412 1.21400 0.98070 0.92150 0.99212 1.20984 1.02515 0.93428 0.89939 1.98421 1.87146 1.79640 1.38667 1.21303 0.97308 1.01247 0.91314 1.18059 1.00229 0.91923 0.92969 1.18524 0.90633 0.93032 0.95293 1.21708 0.95692 0.94416 1.01097 1.27535 0.63848 0.80589 0.95606 2.00000 1.99624 1.92166 1.30259 1.99919 1.98193 1.99450 1.18102 1.99920 1.89925 1.95117 1.31478 1.99920 1.91537 1.90826 1.32970 1.99920 1.97960 1.72179 1.46414 1.22413 0.95534 1.00751 0.93921 1.22084 0.88736 0.89436 1.03377 1.22467 0.99914 0.97776 0.89083 0.74768 0.86519 0.83277 0.82744 0.83567 0.82043 0.79538 0.74775 0.77141 Number of geometries 1 Number of calculations of the screened coulomb radii 6 The total number of SCF iterations 568. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 5.21 12.78 -148.98 -1.90 3.31 16 2 C -0.09 1.12 2.06 71.23 0.15 1.27 16 3 Si 0.96 -10.15 25.48 68.60 1.75 -8.40 16 4 H -0.25 2.49 7.11 99.48 0.71 3.20 16 5 H -0.25 2.48 7.11 99.48 0.71 3.18 16 6 H -0.27 1.53 6.74 99.48 0.67 2.20 16 7 C -0.05 0.37 5.30 -19.65 -0.10 0.27 16 8 C -0.11 0.77 8.65 22.23 0.19 0.96 16 9 C -0.09 0.47 9.82 22.33 0.22 0.69 16 10 C -0.04 0.13 6.31 22.29 0.14 0.27 16 11 Cl -0.07 0.02 28.95 -2.72 -0.08 -0.06 16 12 C -0.09 0.45 9.41 22.51 0.21 0.66 16 13 C -0.03 0.24 5.40 -20.04 -0.11 0.13 16 14 C 0.03 -0.26 4.85 -20.04 -0.10 -0.36 16 15 C -0.11 0.37 8.20 22.48 0.18 0.55 16 16 C 0.33 -0.03 4.82 22.24 0.11 0.08 16 17 F -0.22 -6.11 16.69 44.97 0.75 -5.36 16 18 F -0.16 -2.46 15.30 44.97 0.69 -1.78 16 19 F -0.17 -2.95 15.31 44.97 0.69 -2.26 16 20 F -0.15 -2.38 15.32 44.97 0.69 -1.69 16 21 F -0.17 -3.06 15.29 44.97 0.69 -2.37 16 22 C -0.11 1.10 8.61 22.31 0.19 1.29 16 23 C -0.02 0.41 10.03 22.24 0.22 0.63 16 24 C -0.08 1.44 7.94 22.48 0.18 1.61 16 25 H 0.40 -6.95 8.74 -74.06 -0.65 -7.60 16 26 H 0.12 -2.41 4.93 -2.39 -0.01 -2.42 16 27 H 0.15 -1.35 4.88 -2.91 -0.01 -1.37 16 28 H 0.15 -1.23 8.06 -2.91 -0.02 -1.26 16 29 H 0.15 -0.85 8.06 -2.91 -0.02 -0.87 16 30 H 0.16 0.04 7.39 -2.91 -0.02 0.01 16 31 H 0.19 -1.99 7.38 -2.91 -0.02 -2.01 16 32 H 0.24 -7.06 8.06 -2.91 -0.02 -7.08 16 33 H 0.21 -5.65 6.98 -2.91 -0.02 -5.67 16 Total: 0.00 -36.26 321.97 6.03 -30.23 By element: Atomic # 1 Polarization: -20.96 SS G_CDS: 1.28 Total: -19.68 kcal Atomic # 6 Polarization: 6.57 SS G_CDS: 1.49 Total: 8.06 kcal Atomic # 8 Polarization: 5.21 SS G_CDS: -1.90 Total: 3.31 kcal Atomic # 9 Polarization: -16.96 SS G_CDS: 3.50 Total: -13.45 kcal Atomic # 14 Polarization: -10.15 SS G_CDS: 1.75 Total: -8.40 kcal Atomic # 17 Polarization: 0.02 SS G_CDS: -0.08 Total: -0.06 kcal Total: -36.26 6.03 -30.23 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_271570_18313394_11652148.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 419.939 kcal (2) G-P(sol) polarization free energy of solvation -36.262 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 383.678 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 6.033 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.229 kcal (6) G-S(sol) free energy of system = (1) + (5) 389.710 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 20.41 seconds