Wall clock time and date at job start Mon Mar 8 2021 07:01:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86302 * 109.47228 * 2 1 4 4 C 1.50704 * 109.47106 * 240.00240 * 2 1 3 5 5 C 1.39322 * 120.04553 * 285.03545 * 4 2 1 6 6 C 1.48394 * 120.11627 * 0.02592 * 5 4 2 7 7 C 1.39335 * 120.11681 * 303.08903 * 6 5 4 8 8 C 1.38023 * 119.87790 * 180.02562 * 7 6 5 9 9 C 1.38325 * 120.11604 * 0.02562 * 8 7 6 10 10 C 1.50701 * 119.87506 * 179.97438 * 9 8 7 11 11 H 1.08995 * 112.90761 * 348.75009 * 10 9 8 12 12 C 1.53788 * 113.61384 * 119.99838 * 10 9 8 13 13 C 1.53782 * 87.17210 * 140.02302 * 12 10 9 14 14 H 1.08994 * 113.61106 * 89.07431 * 13 12 10 15 15 O 1.42901 * 113.61519 * 219.97908 * 13 12 10 16 16 C 1.53788 * 87.08017 * 334.52610 * 13 12 10 17 17 C 1.38321 * 120.24591 * 0.24997 * 9 8 7 18 18 C 1.38016 * 120.12128 * 359.49571 * 17 9 8 19 19 C 1.39339 * 119.77133 * 179.74759 * 5 4 2 20 20 C 1.38123 * 119.86053 * 0.25151 * 19 5 4 21 21 Cl 1.73600 * 119.94860 * 179.97438 * 20 19 5 22 22 C 1.38455 * 120.09264 * 0.02562 * 20 19 5 23 23 C 1.38048 * 120.05022 * 105.29181 * 4 2 1 24 24 H 0.96698 * 113.99953 * 59.99655 * 1 2 3 25 25 H 1.08999 * 109.47481 * 120.00288 * 2 1 3 26 26 H 1.48501 * 109.99859 * 60.00075 * 3 2 1 27 27 H 1.48494 * 110.00106 * 181.31754 * 3 2 1 28 28 H 1.07994 * 120.06471 * 0.02562 * 7 6 5 29 29 H 1.07995 * 119.94478 * 179.97438 * 8 7 6 30 30 H 1.09006 * 113.61218 * 25.43725 * 12 10 9 31 31 H 1.09000 * 113.61809 * 254.61725 * 12 10 9 32 32 H 0.96696 * 114.00157 * 180.02562 * 15 13 12 33 33 H 1.08997 * 113.60834 * 139.98254 * 16 13 12 34 34 H 1.08994 * 113.61370 * 270.79256 * 16 13 12 35 35 H 1.07997 * 119.93793 * 179.74235 * 17 9 8 36 36 H 1.07994 * 120.06498 * 180.23022 * 18 17 9 37 37 H 1.07993 * 120.06858 * 180.23271 * 19 5 4 38 38 H 1.08004 * 119.87757 * 179.97438 * 22 20 19 39 39 H 1.08000 * 119.93236 * 359.97438 * 23 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 1.8689 -2.1000 -1.3081 6 6 1.3074 -2.8842 -0.1803 7 6 1.8518 -2.7610 1.0963 8 6 1.3261 -3.4932 2.1416 9 6 0.2610 -4.3484 1.9233 10 6 -0.3084 -5.1457 3.0684 11 1 0.3169 -5.1128 3.9606 12 6 -1.7925 -4.8525 3.3453 13 6 -1.9666 -6.3611 3.5877 14 1 -1.7938 -6.6599 4.6215 15 8 -3.1805 -6.8907 3.0510 16 6 -0.7470 -6.5688 2.6742 17 6 -0.2796 -4.4788 0.6568 18 6 0.2349 -3.7476 -0.3945 19 6 2.3301 -2.7506 -2.4507 20 6 2.8512 -2.0155 -3.4976 21 17 3.4271 -2.8238 -4.9219 22 6 2.9159 -0.6351 -3.4120 23 6 2.4589 0.0145 -2.2803 24 1 -0.3933 0.4417 -0.7650 25 1 1.7924 -0.5139 0.8899 26 1 1.5615 2.4679 1.2085 27 1 3.5346 1.7703 -0.0321 28 1 2.6836 -2.0939 1.2677 29 1 1.7475 -3.3988 3.1315 30 1 -2.3348 -4.4848 2.4741 31 1 -1.9590 -4.2452 4.2349 32 1 -3.2959 -7.8390 3.2006 33 1 -0.0682 -7.3472 3.0226 34 1 -1.0036 -6.6718 1.6199 35 1 -1.1084 -5.1511 0.4912 36 1 -0.1903 -3.8473 -1.3822 37 1 2.2805 -3.8273 -2.5175 38 1 3.3244 -0.0638 -4.2325 39 1 2.5109 1.0915 -2.2191 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_271570_18313394_13419902.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:01:10 Heat of formation + Delta-G solvation = -10.052549 kcal Electronic energy + Delta-G solvation = -23521.031708 eV Core-core repulsion = 20000.426301 eV Total energy + Delta-G solvation = -3520.605407 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 317.086 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -41.48634 -40.70003 -39.00461 -37.94111 -37.15303 -36.08564 -33.57424 -32.65811 -31.81817 -30.32413 -27.01423 -26.72949 -25.91262 -24.02708 -23.51558 -22.58154 -21.83661 -20.29619 -18.89885 -18.59705 -17.88430 -17.05193 -16.94254 -16.57598 -16.41624 -16.13412 -15.66930 -15.48725 -15.22410 -15.08244 -14.62798 -14.45325 -14.24869 -14.17385 -13.86848 -13.68775 -13.47829 -13.30755 -12.86012 -12.74300 -12.38927 -12.34690 -12.14991 -12.07097 -11.97157 -11.76512 -11.65959 -11.35374 -10.77264 -10.46690 -10.24544 -9.83858 -9.82564 -9.20936 -5.10510 -0.22244 0.00158 0.49539 0.51952 1.08529 1.21959 1.58626 1.92546 2.36412 2.76739 3.19851 3.37479 3.50061 3.54276 3.56094 3.61028 3.73177 3.87438 3.90815 3.99716 4.00953 4.05846 4.07365 4.19228 4.37268 4.41972 4.48940 4.54104 4.62485 4.68994 4.75408 4.78517 4.92415 4.95470 5.00770 5.04450 5.10471 5.15212 5.24262 5.31988 5.41563 5.59496 5.64123 5.72202 6.03367 6.55455 6.68810 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.530 6.530 2 C -0.071 4.071 3 Si 0.677 3.323 4 C -0.105 4.105 5 C -0.008 4.008 6 C -0.045 4.045 7 C -0.103 4.103 8 C -0.112 4.112 9 C -0.062 4.062 10 C -0.074 4.074 11 H 0.101 0.899 12 C -0.119 4.119 13 C 0.074 3.926 14 H 0.083 0.917 15 O -0.560 6.560 16 C -0.163 4.163 17 C -0.111 4.111 18 C -0.094 4.094 19 C -0.098 4.098 20 C -0.027 4.027 21 Cl -0.062 7.062 22 C -0.104 4.104 23 C -0.099 4.099 24 H 0.377 0.623 25 H 0.118 0.882 26 H -0.251 1.251 27 H -0.254 1.254 28 H 0.120 0.880 29 H 0.124 0.876 30 H 0.093 0.907 31 H 0.076 0.924 32 H 0.379 0.621 33 H 0.072 0.928 34 H 0.094 0.906 35 H 0.126 0.874 36 H 0.124 0.876 37 H 0.137 0.863 38 H 0.140 0.860 39 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.145 0.528 -0.077 0.553 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.334 6.334 2 C -0.181 4.181 3 Si 0.578 3.422 4 C -0.105 4.105 5 C -0.008 4.008 6 C -0.045 4.045 7 C -0.121 4.121 8 C -0.130 4.130 9 C -0.062 4.062 10 C -0.093 4.093 11 H 0.119 0.881 12 C -0.156 4.156 13 C 0.015 3.985 14 H 0.101 0.899 15 O -0.365 6.365 16 C -0.200 4.200 17 C -0.129 4.129 18 C -0.112 4.112 19 C -0.117 4.117 20 C -0.054 4.054 21 Cl -0.033 7.033 22 C -0.123 4.123 23 C -0.117 4.117 24 H 0.223 0.777 25 H 0.135 0.865 26 H -0.176 1.176 27 H -0.179 1.179 28 H 0.138 0.862 29 H 0.142 0.858 30 H 0.112 0.888 31 H 0.095 0.905 32 H 0.226 0.774 33 H 0.090 0.910 34 H 0.112 0.888 35 H 0.144 0.856 36 H 0.142 0.858 37 H 0.155 0.845 38 H 0.158 0.842 39 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges 0.691 1.364 0.601 1.643 hybrid contribution 0.381 -1.263 0.139 1.326 sum 1.072 0.102 0.740 1.307 Atomic orbital electron populations 1.86574 1.16445 1.81571 1.48852 1.25226 0.85828 1.09602 0.97478 0.95009 0.81380 0.77967 0.87841 1.20512 0.99696 0.93411 0.96890 1.18530 0.97270 0.91967 0.93080 1.18516 0.96633 0.97181 0.92216 1.21069 0.99753 0.99336 0.91914 1.20941 0.96488 0.96722 0.98885 1.19652 0.95587 0.96788 0.94205 1.21355 0.95996 0.95117 0.96785 0.88116 1.23164 0.94459 0.94807 1.03189 1.23357 0.83761 0.95253 0.96084 0.89923 1.86539 1.40571 1.28404 1.80998 1.23879 0.98100 0.96350 1.01711 1.20949 1.00127 0.99651 0.92150 1.21108 0.95472 0.95424 0.99219 1.21170 0.98397 1.00594 0.91531 1.20898 1.01722 0.92977 0.89814 1.98405 1.87282 1.79548 1.38111 1.21099 1.00019 0.92317 0.98871 1.20880 0.98561 0.99475 0.92788 0.77656 0.86459 1.17597 1.17879 0.86191 0.85848 0.88811 0.90537 0.77365 0.90957 0.88756 0.85619 0.85850 0.84469 0.84194 0.84320 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.27 12.82 -35.23 -0.45 -0.72 16 2 C -0.07 0.01 2.07 36.01 0.07 0.08 16 3 Si 0.68 -0.81 29.92 -169.99 -5.09 -5.90 16 4 C -0.10 -0.01 5.26 -104.29 -0.55 -0.56 16 5 C -0.01 -0.01 5.40 -104.90 -0.57 -0.58 16 6 C -0.05 -0.08 4.85 -104.90 -0.51 -0.58 16 7 C -0.10 -0.15 7.95 -39.25 -0.31 -0.46 16 8 C -0.11 -0.13 9.69 -39.63 -0.38 -0.51 16 9 C -0.06 -0.07 5.30 -104.56 -0.55 -0.62 16 10 C -0.07 0.02 3.99 -90.81 -0.36 -0.35 16 11 H 0.10 -0.12 8.09 -51.93 -0.42 -0.54 16 12 C -0.12 -0.05 7.37 -25.91 -0.19 -0.24 16 13 C 0.07 -0.02 5.21 -25.91 -0.14 -0.15 16 14 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 15 O -0.56 -0.54 13.67 -35.23 -0.48 -1.02 16 16 C -0.16 0.09 7.29 -25.77 -0.19 -0.10 16 17 C -0.11 -0.15 8.61 -39.63 -0.34 -0.49 16 18 C -0.09 -0.14 9.63 -39.25 -0.38 -0.52 16 19 C -0.10 -0.09 9.41 -39.21 -0.37 -0.46 16 20 C -0.03 -0.02 6.31 -39.54 -0.25 -0.27 16 21 Cl -0.06 -0.07 28.95 -51.86 -1.50 -1.57 16 22 C -0.10 0.06 9.82 -39.49 -0.39 -0.33 16 23 C -0.10 0.12 8.65 -39.64 -0.34 -0.22 16 24 H 0.38 -1.26 8.70 45.56 0.40 -0.86 16 25 H 0.12 0.09 4.94 -51.93 -0.26 -0.17 16 26 H -0.25 -0.53 7.11 56.52 0.40 -0.13 16 27 H -0.25 -0.28 7.11 56.52 0.40 0.12 16 28 H 0.12 0.04 7.02 -52.49 -0.37 -0.32 16 29 H 0.12 -0.07 8.05 -52.49 -0.42 -0.49 16 30 H 0.09 0.16 7.73 -51.93 -0.40 -0.24 16 31 H 0.08 -0.01 8.14 -51.93 -0.42 -0.43 16 32 H 0.38 -1.18 9.12 45.56 0.42 -0.76 16 33 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 34 H 0.09 0.00 6.30 -51.93 -0.33 -0.32 16 35 H 0.13 0.06 6.63 -52.49 -0.35 -0.29 16 36 H 0.12 0.05 8.06 -52.49 -0.42 -0.37 16 37 H 0.14 0.04 8.06 -52.49 -0.42 -0.38 16 38 H 0.14 -0.32 8.06 -52.48 -0.42 -0.74 16 39 H 0.14 -0.52 5.12 -52.49 -0.27 -0.79 16 LS Contribution 336.68 15.07 5.07 5.07 Total: 0.00 -6.35 336.68 -11.93 -18.28 By element: Atomic # 1 Polarization: -4.07 SS G_CDS: -3.74 Total: -7.80 kcal Atomic # 6 Polarization: -0.61 SS G_CDS: -5.74 Total: -6.35 kcal Atomic # 8 Polarization: -0.80 SS G_CDS: -0.93 Total: -1.74 kcal Atomic # 14 Polarization: -0.81 SS G_CDS: -5.09 Total: -5.90 kcal Atomic # 17 Polarization: -0.07 SS G_CDS: -1.50 Total: -1.57 kcal Total LS contribution 5.07 Total: 5.07 kcal Total: -6.35 -11.93 -18.28 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_271570_18313394_13419902.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 8.226 kcal (2) G-P(sol) polarization free energy of solvation -6.353 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 1.873 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.925 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.278 kcal (6) G-S(sol) free energy of system = (1) + (5) -10.053 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds