Wall clock time and date at job start Mon Mar 8 2021 05:56:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 N 1.40076 * 126.14176 * 2 1 4 4 C 1.30896 * 108.50503 * 179.97438 * 3 2 1 5 5 C 1.50699 * 125.69765 * 179.97438 * 4 3 2 6 6 O 1.42904 * 109.47035 * 179.97438 * 5 4 3 7 7 Si 1.63104 * 113.99769 * 180.02562 * 6 5 4 8 8 C 1.86305 * 109.47099 * 299.99626 * 7 6 5 9 9 C 1.86296 * 109.47502 * 59.99889 * 7 6 5 10 10 C 1.86301 * 109.46773 * 180.02562 * 7 6 5 11 11 C 1.52994 * 109.47170 * 59.99630 * 10 7 6 12 12 C 1.52999 * 109.46883 * 179.97438 * 10 7 6 13 13 C 1.52996 * 109.47043 * 299.99664 * 10 7 6 14 14 C 1.39498 * 108.59865 * 359.77371 * 4 3 2 15 15 C 1.36301 * 126.13584 * 179.97438 * 2 1 3 16 16 C 1.47979 * 126.33899 * 359.97438 * 15 2 1 17 17 C 1.39463 * 120.13130 * 55.10848 * 16 15 2 18 18 C 1.38126 * 119.84155 * 180.27964 * 17 16 15 19 19 Cl 1.73605 * 119.94059 * 179.74498 * 18 17 16 20 20 C 1.38435 * 120.11156 * 359.76918 * 18 17 16 21 21 C 1.38348 * 120.26777 * 359.97438 * 20 18 17 22 22 C 1.37958 * 120.14834 * 0.02562 * 21 20 18 23 23 C 1.50702 * 120.05573 * 180.02562 * 22 21 20 24 24 O 1.42908 * 109.46969 * 254.69741 * 23 22 21 25 25 Si 1.86296 * 109.47134 * 14.69578 * 23 22 21 26 26 H 1.48499 * 109.47297 * 300.00156 * 25 23 22 27 27 H 1.48502 * 109.47349 * 59.99968 * 25 23 22 28 28 H 1.48496 * 109.47418 * 180.02562 * 25 23 22 29 29 H 1.09002 * 109.47146 * 264.67288 * 1 2 3 30 30 H 1.09001 * 109.47090 * 24.66890 * 1 2 3 31 31 H 1.08997 * 109.47316 * 144.66809 * 1 2 3 32 32 H 1.08999 * 109.47565 * 299.97766 * 5 4 3 33 33 H 1.09003 * 109.47277 * 59.97420 * 5 4 3 34 34 H 1.09004 * 109.46941 * 60.00592 * 8 7 6 35 35 H 1.08992 * 109.47092 * 180.02562 * 8 7 6 36 36 H 1.09000 * 109.47089 * 300.00820 * 8 7 6 37 37 H 1.09000 * 109.46682 * 59.99866 * 9 7 6 38 38 H 1.08992 * 109.47149 * 179.97438 * 9 7 6 39 39 H 1.09003 * 109.46777 * 299.99972 * 9 7 6 40 40 H 1.09001 * 109.47409 * 60.00451 * 11 10 7 41 41 H 1.09004 * 109.47153 * 180.02562 * 11 10 7 42 42 H 1.08998 * 109.47645 * 300.00168 * 11 10 7 43 43 H 1.09001 * 109.47242 * 60.00336 * 12 10 7 44 44 H 1.09004 * 109.46851 * 179.97438 * 12 10 7 45 45 H 1.09003 * 109.46998 * 299.99751 * 12 10 7 46 46 H 1.08998 * 109.47472 * 60.00119 * 13 10 7 47 47 H 1.09003 * 109.47267 * 180.02562 * 13 10 7 48 48 H 1.09004 * 109.47354 * 300.00428 * 13 10 7 49 49 H 1.07994 * 126.07157 * 180.27319 * 14 4 3 50 50 H 1.07993 * 120.08006 * 0.02562 * 17 16 15 51 51 H 1.08000 * 119.86336 * 179.97438 * 20 18 17 52 52 H 1.07994 * 119.92253 * 179.97438 * 21 20 18 53 53 H 1.08997 * 109.47283 * 134.69915 * 23 22 21 54 54 H 0.96703 * 113.99999 * 60.00197 * 24 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.2911 1.1312 0.0000 4 6 3.5386 0.7346 0.0006 5 6 4.7474 1.6345 0.0002 6 8 5.9340 0.8382 0.0016 7 14 7.3151 1.7059 0.0021 8 6 7.3750 2.7788 -1.5198 9 6 7.3727 2.7809 1.5224 10 6 8.7753 0.5488 0.0031 11 6 8.7276 -0.3336 -1.2458 12 6 10.0708 1.3627 0.0029 13 6 8.7264 -0.3328 1.2526 14 6 3.5620 -0.6602 0.0062 15 6 2.2688 -1.1008 0.0005 16 6 1.8232 -2.5119 0.0017 17 6 0.9540 -2.9724 -0.9871 18 6 0.5374 -4.2893 -0.9769 19 17 -0.5497 -4.8636 -2.2026 20 6 0.9847 -5.1517 0.0093 21 6 1.8511 -4.7011 0.9892 22 6 2.2743 -3.3880 0.9895 23 6 3.2185 -2.8995 2.0576 24 8 2.5013 -2.0945 2.9956 25 14 3.9688 -4.3596 2.9383 26 1 2.8912 -5.1685 3.5625 27 1 4.7141 -5.1962 1.9636 28 1 4.8988 -3.8784 3.9912 29 1 -0.3633 -0.0954 1.0232 30 1 -0.3633 0.9339 -0.4289 31 1 -0.3634 -0.8384 -0.5943 32 1 4.7325 2.2628 -0.8904 33 1 4.7316 2.2646 0.8895 34 1 6.5206 3.4558 -1.5209 35 1 8.2981 3.3582 -1.5198 36 1 7.3412 2.1497 -2.4094 37 1 7.3377 2.1531 2.4128 38 1 8.2959 3.3604 1.5229 39 1 6.5184 3.4579 1.5213 40 1 8.7625 0.2944 -2.1360 41 1 9.5817 -1.0109 -1.2449 42 1 7.8047 -0.9134 -1.2461 43 1 10.1050 1.9916 0.8925 44 1 10.9252 0.6857 0.0040 45 1 10.1054 1.9905 -0.8875 46 1 7.8035 -0.9126 1.2524 47 1 9.5810 -1.0094 1.2535 48 1 8.7603 0.2959 2.1425 49 1 4.4454 -1.2813 0.0121 50 1 0.6044 -2.3000 -1.7564 51 1 0.6560 -6.1805 0.0136 52 1 2.1963 -5.3786 1.7561 53 1 4.0095 -2.3058 1.5994 54 1 1.7806 -2.5593 3.4426 RHF calculation, no. of doubly occupied orbitals= 69 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_271570_18313394_15493832.mol2 54 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:56:09 Heat of formation + Delta-G solvation = -24.351772 kcal Electronic energy + Delta-G solvation = -33838.685327 eV Core-core repulsion = 29540.703121 eV Total energy + Delta-G solvation = -4297.982207 eV No. of doubly occupied orbitals = 69 Molecular weight (most abundant/longest-lived isotopes) = 396.155 amu Computer time = 1.42 seconds Orbital eigenvalues (eV) -42.37024 -40.55420 -38.02444 -37.99727 -37.20250 -36.78032 -34.46625 -33.37155 -32.55022 -30.13828 -29.42602 -29.01290 -28.88739 -27.78350 -27.32338 -26.99619 -25.89821 -24.48729 -22.84275 -21.42660 -20.77957 -20.31689 -18.73587 -18.09361 -17.62049 -17.21615 -16.98583 -16.67726 -16.25467 -16.06053 -16.00392 -15.69851 -15.46773 -15.20589 -14.96964 -14.91193 -14.80155 -14.66245 -14.57616 -14.21500 -13.93510 -13.72460 -13.59960 -13.46243 -13.39566 -13.31755 -13.14122 -13.02223 -12.89846 -12.88987 -12.85709 -12.57644 -12.34536 -12.16632 -12.14699 -12.04801 -11.95289 -11.76102 -11.62265 -11.60135 -11.55662 -11.36942 -10.58003 -10.41380 -10.31450 -10.01609 -9.96560 -9.73681 -9.34207 -0.27895 -0.06653 0.81743 1.02184 1.13455 1.28419 1.42191 1.53588 1.67930 1.75267 1.83404 1.93305 2.16002 2.36623 2.50718 3.19722 3.49864 3.54571 3.58347 3.70875 3.98639 3.99521 4.13130 4.17573 4.18077 4.24459 4.29867 4.35126 4.45284 4.49221 4.52596 4.56909 4.59160 4.62636 4.76241 4.78378 4.80859 4.82494 4.83319 4.87913 4.89495 4.93186 5.01494 5.05233 5.06210 5.15025 5.15513 5.20089 5.25892 5.37569 5.43566 5.47305 5.50407 5.52761 5.61372 5.67350 5.69065 6.00426 6.67845 6.70160 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.092 3.908 2 N -0.366 5.366 3 N -0.312 5.312 4 C 0.060 3.940 5 C 0.166 3.834 6 O -0.630 6.630 7 Si 1.321 2.679 8 C -0.519 4.519 9 C -0.520 4.520 10 C -0.378 4.378 11 C -0.137 4.137 12 C -0.141 4.141 13 C -0.139 4.139 14 C -0.231 4.231 15 C 0.121 3.879 16 C -0.005 4.005 17 C -0.096 4.096 18 C -0.035 4.035 19 Cl -0.063 7.063 20 C -0.090 4.090 21 C -0.109 4.109 22 C -0.087 4.087 23 C -0.092 4.092 24 O -0.545 6.545 25 Si 0.973 3.027 26 H -0.233 1.233 27 H -0.249 1.249 28 H -0.274 1.274 29 H 0.084 0.916 30 H 0.099 0.901 31 H 0.098 0.902 32 H 0.088 0.912 33 H 0.087 0.913 34 H 0.070 0.930 35 H 0.079 0.921 36 H 0.070 0.930 37 H 0.069 0.931 38 H 0.079 0.921 39 H 0.069 0.931 40 H 0.059 0.941 41 H 0.048 0.952 42 H 0.058 0.942 43 H 0.063 0.937 44 H 0.050 0.950 45 H 0.063 0.937 46 H 0.059 0.941 47 H 0.049 0.951 48 H 0.059 0.941 49 H 0.159 0.841 50 H 0.139 0.861 51 H 0.161 0.839 52 H 0.157 0.843 53 H 0.119 0.881 54 H 0.386 0.614 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.897 -2.581 1.114 2.951 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.048 4.048 2 N -0.149 5.149 3 N -0.137 5.137 4 C -0.104 4.104 5 C 0.088 3.912 6 O -0.588 6.588 7 Si 1.452 2.548 8 C -0.621 4.621 9 C -0.622 4.622 10 C -0.421 4.421 11 C -0.195 4.195 12 C -0.198 4.198 13 C -0.196 4.196 14 C -0.259 4.259 15 C -0.006 4.006 16 C -0.007 4.007 17 C -0.116 4.116 18 C -0.061 4.061 19 Cl -0.034 7.034 20 C -0.109 4.109 21 C -0.127 4.127 22 C -0.088 4.088 23 C -0.201 4.201 24 O -0.352 6.352 25 Si 0.795 3.205 26 H -0.156 1.156 27 H -0.172 1.172 28 H -0.200 1.200 29 H 0.102 0.898 30 H 0.118 0.882 31 H 0.116 0.884 32 H 0.106 0.894 33 H 0.104 0.896 34 H 0.089 0.911 35 H 0.098 0.902 36 H 0.089 0.911 37 H 0.089 0.911 38 H 0.098 0.902 39 H 0.089 0.911 40 H 0.078 0.922 41 H 0.067 0.933 42 H 0.077 0.923 43 H 0.082 0.918 44 H 0.069 0.931 45 H 0.082 0.918 46 H 0.078 0.922 47 H 0.068 0.932 48 H 0.078 0.922 49 H 0.177 0.823 50 H 0.157 0.843 51 H 0.178 0.822 52 H 0.174 0.826 53 H 0.136 0.864 54 H 0.234 0.766 Dipole moment (debyes) X Y Z Total from point charges -1.257 -2.123 1.224 2.755 hybrid contribution 0.122 -0.237 -0.360 0.448 sum -1.136 -2.360 0.864 2.758 Atomic orbital electron populations 1.22147 0.72696 1.05576 1.04412 1.48915 1.07107 1.02240 1.56627 1.77172 1.01421 1.08398 1.26738 1.22273 0.92969 0.94999 1.00169 1.20088 0.79514 0.88708 1.02855 1.85231 1.27737 1.54126 1.91721 0.76139 0.55323 0.58819 0.64545 1.27113 1.05030 1.11597 1.18367 1.27120 1.05004 1.11641 1.18395 1.25845 1.11640 1.06653 0.97917 1.21548 1.01816 0.99461 0.96629 1.21606 0.96205 0.99727 1.02279 1.21563 1.01878 0.99518 0.96639 1.21273 0.95855 0.94252 1.14569 1.19488 0.90916 0.87328 1.02873 1.17703 0.98040 0.89401 0.95574 1.21161 0.97182 0.94653 0.98575 1.20902 0.97308 0.94241 0.93688 1.98412 1.62420 1.88864 1.53718 1.21411 0.96161 1.00930 0.92402 1.21242 0.97370 0.94688 0.99424 1.20551 0.98459 0.93557 0.96280 1.25311 0.97213 1.06025 0.91572 1.86585 1.50959 1.41149 1.56463 0.85379 0.80226 0.75314 0.79555 1.15591 1.17198 1.19958 0.89785 0.88231 0.88387 0.89419 0.89572 0.91101 0.90227 0.91112 0.91138 0.90220 0.91136 0.92204 0.93262 0.92327 0.91838 0.93052 0.91826 0.92236 0.93208 0.92190 0.82328 0.84307 0.82151 0.82601 0.86360 0.76560 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.09 -0.07 11.23 127.77 1.44 1.36 16 2 N -0.37 -2.30 4.06 -356.89 -1.45 -3.74 16 3 N -0.31 -3.08 12.56 -47.59 -0.60 -3.68 16 4 C 0.06 0.47 7.16 43.00 0.31 0.78 16 5 C 0.17 0.44 5.75 71.24 0.41 0.85 16 6 O -0.63 -1.08 7.87 -148.98 -1.17 -2.25 16 7 Si 1.32 -2.49 8.45 68.60 0.58 -1.91 16 8 C -0.52 0.70 8.50 113.37 0.96 1.66 16 9 C -0.52 0.58 8.50 113.37 0.96 1.54 16 10 C -0.38 0.24 0.53 -10.80 -0.01 0.23 16 11 C -0.14 -0.04 7.84 71.98 0.56 0.53 16 12 C -0.14 0.20 7.85 71.98 0.56 0.76 16 13 C -0.14 -0.04 7.85 71.98 0.56 0.53 16 14 C -0.23 -1.62 8.41 22.20 0.19 -1.43 16 15 C 0.12 0.68 5.78 40.66 0.23 0.91 16 16 C 0.00 -0.01 5.49 -20.09 -0.11 -0.12 16 17 C -0.10 -0.02 8.40 22.54 0.19 0.17 16 18 C -0.03 0.03 6.31 22.29 0.14 0.17 16 19 Cl -0.06 0.00 28.95 -2.72 -0.08 -0.08 16 20 C -0.09 0.31 9.82 22.34 0.22 0.53 16 21 C -0.11 0.41 8.65 22.23 0.19 0.60 16 22 C -0.09 0.05 5.29 -19.62 -0.10 -0.05 16 23 C -0.09 0.04 2.07 71.24 0.15 0.19 16 24 O -0.55 -0.66 12.81 -148.98 -1.91 -2.57 16 25 Si 0.97 -2.60 25.48 68.60 1.75 -0.85 16 26 H -0.23 1.28 6.74 99.48 0.67 1.95 16 27 H -0.25 0.51 7.11 99.48 0.71 1.21 16 28 H -0.27 -0.48 7.11 99.48 0.71 0.23 16 29 H 0.08 -0.19 8.14 -2.39 -0.02 -0.21 16 30 H 0.10 -0.22 8.14 -2.39 -0.02 -0.24 16 31 H 0.10 -0.40 6.19 -2.39 -0.01 -0.42 16 32 H 0.09 -0.04 7.21 -2.39 -0.02 -0.05 16 33 H 0.09 0.01 7.21 -2.39 -0.02 -0.01 16 34 H 0.07 -0.13 7.48 -2.38 -0.02 -0.14 16 35 H 0.08 -0.18 7.79 -2.39 -0.02 -0.20 16 36 H 0.07 -0.04 7.79 -2.39 -0.02 -0.06 16 37 H 0.07 -0.01 7.79 -2.39 -0.02 -0.03 16 38 H 0.08 -0.17 7.79 -2.39 -0.02 -0.19 16 39 H 0.07 -0.10 7.48 -2.39 -0.02 -0.12 16 40 H 0.06 -0.05 7.79 -2.39 -0.02 -0.07 16 41 H 0.05 0.05 8.14 -2.38 -0.02 0.03 16 42 H 0.06 0.04 7.97 -2.39 -0.02 0.02 16 43 H 0.06 -0.18 7.79 -2.39 -0.02 -0.20 16 44 H 0.05 -0.01 8.14 -2.38 -0.02 -0.03 16 45 H 0.06 -0.18 7.79 -2.39 -0.02 -0.20 16 46 H 0.06 0.03 7.97 -2.39 -0.02 0.01 16 47 H 0.05 0.04 8.14 -2.39 -0.02 0.02 16 48 H 0.06 -0.05 7.80 -2.38 -0.02 -0.07 16 49 H 0.16 0.79 7.01 -2.91 -0.02 0.77 16 50 H 0.14 -0.11 7.39 -2.91 -0.02 -0.13 16 51 H 0.16 -1.20 8.06 -2.91 -0.02 -1.22 16 52 H 0.16 -1.19 4.88 -2.91 -0.01 -1.21 16 53 H 0.12 0.16 5.30 -2.39 -0.01 0.15 16 54 H 0.39 -2.40 8.70 -74.06 -0.64 -3.05 16 Total: 0.00 -14.30 442.45 4.97 -9.33 By element: Atomic # 1 Polarization: -4.44 SS G_CDS: 0.98 Total: -3.46 kcal Atomic # 6 Polarization: 2.35 SS G_CDS: 6.86 Total: 9.21 kcal Atomic # 7 Polarization: -5.38 SS G_CDS: -2.05 Total: -7.42 kcal Atomic # 8 Polarization: -1.74 SS G_CDS: -3.08 Total: -4.82 kcal Atomic # 14 Polarization: -5.09 SS G_CDS: 2.33 Total: -2.76 kcal Atomic # 17 Polarization: 0.00 SS G_CDS: -0.08 Total: -0.08 kcal Total: -14.30 4.97 -9.33 kcal The number of atoms in the molecule is 54 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_271570_18313394_15493832.mol2 54 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -15.018 kcal (2) G-P(sol) polarization free energy of solvation -14.302 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -29.319 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 4.967 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -9.334 kcal (6) G-S(sol) free energy of system = (1) + (5) -24.352 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.43 seconds