Wall clock time and date at job start Mon Mar 8 2021 07:33:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86301 * 109.46772 * 2 1 4 4 C 1.50694 * 109.47305 * 239.99829 * 2 1 3 5 5 C 1.37991 * 120.32416 * 119.99863 * 4 2 1 6 6 N 1.32014 * 120.89619 * 179.97438 * 5 4 2 7 7 C 1.32337 * 121.64841 * 359.97438 * 6 5 4 8 8 N 1.39146 * 119.71527 * 179.97438 * 7 6 5 9 9 C 1.47631 * 110.99984 * 29.51030 * 8 7 6 10 10 C 1.53656 * 88.14800 * 222.09632 * 9 8 7 11 11 C 1.46691 * 110.99739 * 293.82519 * 8 7 6 12 12 C 1.53064 * 120.99484 * 264.02155 * 11 8 7 13 13 C 1.53921 * 86.84180 * 150.36137 * 12 11 8 14 14 C 1.50703 * 113.58760 * 220.46614 * 13 12 11 15 15 N 1.30498 * 125.65038 * 263.58194 * 14 13 12 16 16 C 1.34127 * 109.25287 * 180.02562 * 15 14 13 17 17 C 1.34665 * 108.02221 * 0.02562 * 16 15 14 18 18 N 1.35040 * 125.64906 * 83.27349 * 14 13 12 19 19 C 1.53317 * 121.00147 * 12.08689 * 11 8 7 20 20 C 1.39340 * 120.56328 * 0.25931 * 7 6 5 21 21 F 1.35104 * 120.46929 * 179.72213 * 20 7 6 22 22 C 1.38444 * 119.05832 * 359.49280 * 20 7 6 23 23 H 0.96696 * 114.00236 * 60.00899 * 1 2 3 24 24 H 1.08998 * 109.47099 * 119.99237 * 2 1 3 25 25 H 1.48503 * 110.00221 * 59.99632 * 3 2 1 26 26 H 1.48495 * 109.99869 * 181.31670 * 3 2 1 27 27 H 1.07999 * 119.55090 * 359.95673 * 5 4 2 28 28 H 1.09004 * 113.44255 * 336.91432 * 9 8 7 29 29 H 1.08993 * 113.44172 * 107.22258 * 9 8 7 30 30 H 1.08991 * 114.20965 * 271.76894 * 10 9 8 31 31 H 1.08994 * 114.20774 * 138.92334 * 10 9 8 32 32 H 1.08997 * 113.65643 * 35.87547 * 12 11 8 33 33 H 1.09002 * 113.73656 * 264.86011 * 12 11 8 34 34 H 1.09003 * 113.58552 * 89.72716 * 13 12 11 35 35 H 1.08004 * 125.98740 * 179.97438 * 16 15 14 36 36 H 1.08005 * 126.59150 * 180.02562 * 17 16 15 37 37 H 0.97006 * 126.39583 * 0.02562 * 18 14 13 38 38 H 1.09003 * 113.72734 * 95.18813 * 19 11 8 39 39 H 1.09001 * 113.65449 * 324.08764 * 19 11 8 40 40 H 1.08000 * 120.76006 * 180.24893 * 22 20 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7104 -1.2304 5 6 2.7251 -0.0462 -2.1431 6 7 3.1718 -0.6577 -3.2244 7 6 2.8801 -1.9236 -3.4768 8 7 3.3722 -2.5283 -4.6294 9 6 4.6604 -1.9300 -5.0320 10 6 4.1661 -1.9671 -6.4864 11 6 2.7867 -1.9239 -5.8310 12 6 1.5702 -2.5514 -6.5161 13 6 1.1921 -1.1270 -6.9600 14 6 -0.2846 -0.8396 -6.8710 15 7 -1.1370 -0.9263 -7.8553 16 6 -2.3595 -0.5977 -7.4120 17 6 -2.2607 -0.2952 -6.1035 18 7 -0.9459 -0.4553 -5.7581 19 6 1.9934 -0.6145 -5.7498 20 6 2.0796 -2.6544 -2.6012 21 9 1.7784 -3.9451 -2.8635 22 6 1.6013 -2.0406 -1.4562 23 1 -0.3933 0.4416 -0.7651 24 1 1.7924 -0.5137 0.8900 25 1 1.5613 2.4680 1.2085 26 1 3.5345 1.7704 -0.0321 27 1 2.9842 0.9879 -1.9706 28 1 4.8076 -0.9198 -4.6498 29 1 5.5164 -2.5789 -4.8474 30 1 4.3837 -2.8986 -7.0088 31 1 4.4138 -1.0775 -7.0655 32 1 0.8581 -2.9964 -5.8212 33 1 1.8257 -3.2139 -7.3431 34 1 1.6216 -0.8409 -7.9202 35 1 -3.2643 -0.5781 -8.0014 36 1 -3.0654 0.0091 -5.4505 37 1 -0.5605 -0.3150 -4.8791 38 1 2.5888 0.2731 -5.9638 39 1 1.3993 -0.5186 -4.8410 40 1 0.9819 -2.5824 -0.7566 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_15704104_17656566.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:33:35 Heat of formation + Delta-G solvation = 113.199823 kcal Electronic energy + Delta-G solvation = -27379.439100 eV Core-core repulsion = 23500.427444 eV Total energy + Delta-G solvation = -3879.011656 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 317.128 amu Computer time = 0.76 seconds Orbital eigenvalues (eV) -49.99374 -43.39681 -42.67624 -40.97197 -38.23403 -37.20301 -33.92104 -33.39697 -32.90338 -30.47997 -29.85667 -27.17116 -26.39806 -26.01998 -25.16712 -23.30012 -23.14728 -22.17049 -21.28663 -19.84563 -19.29632 -19.14690 -18.47244 -18.04935 -17.73245 -17.27510 -16.65141 -16.43043 -16.39304 -16.24233 -15.99141 -15.61909 -15.33971 -14.79861 -14.66963 -14.64414 -14.36716 -14.27229 -13.98138 -13.70338 -13.48749 -13.14214 -12.99730 -12.89825 -12.58507 -12.28584 -12.26474 -11.89093 -11.43401 -11.14615 -11.07478 -10.93802 -10.93307 -10.76348 -10.37319 -9.86133 -9.30814 -5.31550 -0.57503 -0.28864 0.95660 1.09719 1.37413 1.73712 2.05702 2.09906 2.21185 2.29692 2.81517 2.92415 3.12204 3.17811 3.21770 3.23415 3.29520 3.49300 3.55115 3.58406 3.74206 3.96616 4.04441 4.10715 4.13819 4.24330 4.33799 4.42506 4.44506 4.50055 4.51933 4.61592 4.64980 4.69243 4.71476 4.78344 4.83347 4.93505 5.04024 5.12214 5.19593 5.23517 5.82850 5.92331 6.21896 6.36767 6.37606 7.18555 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.535 6.535 2 C -0.064 4.064 3 Si 0.688 3.312 4 C -0.149 4.149 5 C 0.102 3.898 6 N -0.470 5.470 7 C 0.244 3.756 8 N -0.417 5.417 9 C 0.007 3.993 10 C -0.116 4.116 11 C 0.049 3.951 12 C -0.105 4.105 13 C -0.022 4.022 14 C 0.221 3.779 15 N -0.485 5.485 16 C -0.026 4.026 17 C -0.057 4.057 18 N -0.566 5.566 19 C -0.121 4.121 20 C 0.080 3.920 21 F -0.114 7.114 22 C -0.081 4.081 23 H 0.379 0.621 24 H 0.122 0.878 25 H -0.247 1.247 26 H -0.251 1.251 27 H 0.166 0.834 28 H 0.101 0.899 29 H 0.090 0.910 30 H 0.103 0.897 31 H 0.090 0.910 32 H 0.085 0.915 33 H 0.090 0.910 34 H 0.125 0.875 35 H 0.171 0.829 36 H 0.178 0.822 37 H 0.414 0.586 38 H 0.091 0.909 39 H 0.076 0.924 40 H 0.155 0.845 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.600 4.075 1.245 4.303 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.340 6.340 2 C -0.176 4.176 3 Si 0.589 3.411 4 C -0.151 4.151 5 C -0.056 4.056 6 N -0.181 5.181 7 C 0.013 3.987 8 N -0.138 5.138 9 C -0.121 4.121 10 C -0.154 4.154 11 C -0.040 4.040 12 C -0.144 4.144 13 C -0.043 4.043 14 C -0.043 4.043 15 N -0.204 5.204 16 C -0.173 4.173 17 C -0.190 4.190 18 N -0.169 5.169 19 C -0.161 4.161 20 C 0.057 3.943 21 F -0.092 7.092 22 C -0.108 4.108 23 H 0.226 0.774 24 H 0.139 0.861 25 H -0.172 1.172 26 H -0.176 1.176 27 H 0.183 0.817 28 H 0.119 0.881 29 H 0.109 0.891 30 H 0.122 0.878 31 H 0.108 0.892 32 H 0.103 0.897 33 H 0.108 0.892 34 H 0.143 0.857 35 H 0.189 0.811 36 H 0.195 0.805 37 H 0.251 0.749 38 H 0.110 0.890 39 H 0.095 0.905 40 H 0.173 0.827 Dipole moment (debyes) X Y Z Total from point charges 1.763 3.796 0.934 4.288 hybrid contribution -0.706 -0.302 2.201 2.331 sum 1.057 3.494 3.135 4.812 Atomic orbital electron populations 1.86560 1.16621 1.81574 1.49206 1.25043 0.85543 1.10383 0.96601 0.94861 0.81320 0.76891 0.88077 1.21310 1.00056 0.94725 0.99056 1.22535 0.94080 0.99877 0.89134 1.67805 1.21783 1.08539 1.19981 1.20556 0.95085 0.88313 0.94724 1.67046 1.05753 1.43002 0.97974 1.23871 0.92118 1.01257 0.94809 1.22977 0.91974 1.04172 0.96301 1.23564 0.95241 0.94826 0.90377 1.22939 0.95591 0.95573 1.00263 1.20869 0.85302 0.97641 1.00472 1.22877 0.95785 1.03206 0.82395 1.70253 1.00541 1.20235 1.29376 1.22416 0.96410 1.05444 0.93077 1.22802 0.86315 1.11013 0.98882 1.43239 1.08583 1.52975 1.12140 1.23227 0.97821 0.97747 0.97301 1.18317 0.99814 0.80621 0.95522 1.91581 1.91019 1.32976 1.93617 1.21569 0.98663 0.94674 0.95881 0.77352 0.86058 1.17172 1.17614 0.81745 0.88109 0.89127 0.87844 0.89197 0.89693 0.89173 0.85665 0.81143 0.80481 0.74862 0.89043 0.90548 0.82706 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 1.35 12.78 -35.23 -0.45 0.90 16 2 C -0.06 0.19 2.84 36.00 0.10 0.29 16 3 Si 0.69 -2.45 29.82 -169.99 -5.07 -7.52 16 4 C -0.15 0.34 5.40 -104.47 -0.56 -0.23 16 5 C 0.10 -0.22 9.84 -17.56 -0.17 -0.40 16 6 N -0.47 0.25 6.83 -12.36 -0.08 0.16 16 7 C 0.24 0.18 4.86 -154.86 -0.75 -0.57 16 8 N -0.42 -0.36 6.28 -170.76 -1.07 -1.44 16 9 C 0.01 0.00 7.58 -8.77 -0.07 -0.07 16 10 C -0.12 0.23 8.21 -26.50 -0.22 0.01 16 11 C 0.05 -0.04 1.14 -137.32 -0.16 -0.20 16 12 C -0.10 0.01 7.51 -26.22 -0.20 -0.19 16 13 C -0.02 0.01 4.28 -90.82 -0.39 -0.38 16 14 C 0.22 0.39 7.35 -155.42 -1.14 -0.76 16 15 N -0.48 -2.10 11.25 -10.82 -0.12 -2.23 16 16 C -0.03 -0.06 11.87 -17.81 -0.21 -0.27 16 17 C -0.06 0.00 12.04 -16.56 -0.20 -0.20 16 18 N -0.57 0.21 5.94 -10.23 -0.06 0.15 16 19 C -0.12 0.20 5.76 -26.09 -0.15 0.05 16 20 C 0.08 0.09 7.35 -39.10 -0.29 -0.20 16 21 F -0.11 -0.35 17.10 2.25 0.04 -0.31 16 22 C -0.08 0.07 9.75 -39.26 -0.38 -0.32 16 23 H 0.38 -2.49 8.70 45.56 0.40 -2.09 16 24 H 0.12 -0.30 7.96 -51.93 -0.41 -0.71 16 25 H -0.25 0.00 7.11 56.52 0.40 0.40 16 26 H -0.25 0.30 7.11 56.52 0.40 0.71 16 27 H 0.17 -0.72 4.88 -52.49 -0.26 -0.97 16 28 H 0.10 -0.06 6.65 -51.93 -0.35 -0.41 16 29 H 0.09 -0.07 8.14 -51.93 -0.42 -0.49 16 30 H 0.10 -0.22 8.14 -51.93 -0.42 -0.65 16 31 H 0.09 -0.29 8.14 -51.93 -0.42 -0.71 16 32 H 0.08 0.12 8.09 -51.93 -0.42 -0.30 16 33 H 0.09 -0.03 8.14 -51.93 -0.42 -0.45 16 34 H 0.13 -0.10 8.14 -51.93 -0.42 -0.53 16 35 H 0.17 0.06 8.06 -52.48 -0.42 -0.37 16 36 H 0.18 -0.58 8.06 -52.48 -0.42 -1.00 16 37 H 0.41 -1.17 7.54 -40.82 -0.31 -1.48 16 38 H 0.09 -0.19 8.14 -51.93 -0.42 -0.62 16 39 H 0.08 -0.13 5.28 -51.93 -0.27 -0.40 16 40 H 0.16 -0.24 8.06 -52.49 -0.42 -0.66 16 LS Contribution 332.11 15.07 5.00 5.00 Total: 0.00 -8.19 332.11 -11.23 -19.41 By element: Atomic # 1 Polarization: -6.11 SS G_CDS: -4.62 Total: -10.73 kcal Atomic # 6 Polarization: 1.37 SS G_CDS: -4.79 Total: -3.41 kcal Atomic # 7 Polarization: -2.01 SS G_CDS: -1.34 Total: -3.35 kcal Atomic # 8 Polarization: 1.35 SS G_CDS: -0.45 Total: 0.90 kcal Atomic # 9 Polarization: -0.35 SS G_CDS: 0.04 Total: -0.31 kcal Atomic # 14 Polarization: -2.45 SS G_CDS: -5.07 Total: -7.52 kcal Total LS contribution 5.00 Total: 5.00 kcal Total: -8.19 -11.23 -19.41 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_15704104_17656566.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 132.612 kcal (2) G-P(sol) polarization free energy of solvation -8.186 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 124.426 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.226 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.412 kcal (6) G-S(sol) free energy of system = (1) + (5) 113.200 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.76 seconds