Wall clock time and date at job start Mon Mar 8 2021 09:19:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42894 * 1 3 3 Si 1.86298 * 109.47725 * 2 1 4 4 C 1.50699 * 109.47188 * 120.00199 * 2 1 3 5 5 C 1.38610 * 120.72001 * 244.71522 * 4 2 1 6 6 N 1.32279 * 119.19261 * 179.78937 * 5 4 2 7 7 C 1.32490 * 120.74620 * 0.47292 * 6 5 4 8 8 N 1.38408 * 119.22121 * 179.75729 * 7 6 5 9 9 C 1.46498 * 119.99584 * 0.02562 * 8 7 6 10 10 H 1.08998 * 112.85099 * 25.34217 * 9 8 7 11 11 C 1.53779 * 113.61170 * 156.53113 * 9 8 7 12 12 C 1.53775 * 87.08318 * 139.98396 * 11 9 8 13 13 H 1.09000 * 113.61898 * 89.19951 * 12 11 9 14 14 C 1.53008 * 113.61526 * 220.02280 * 12 11 9 15 15 F 1.39899 * 109.46801 * 185.00109 * 14 12 11 16 16 C 1.53780 * 113.61944 * 254.13859 * 9 8 7 17 17 N 1.32502 * 121.56151 * 359.78254 * 7 6 5 18 18 C 1.32273 * 120.73944 * 359.97283 * 17 7 6 19 19 H 0.96709 * 113.99337 * 300.00145 * 1 2 3 20 20 H 1.09006 * 109.47099 * 239.99662 * 2 1 3 21 21 H 1.48506 * 109.99834 * 300.00610 * 3 2 1 22 22 H 1.48502 * 110.00011 * 61.31874 * 3 2 1 23 23 H 1.07999 * 120.40429 * 359.97438 * 5 4 2 24 24 H 0.96998 * 120.00041 * 180.02562 * 8 7 6 25 25 H 1.09003 * 113.62068 * 254.53665 * 11 9 8 26 26 H 1.09003 * 113.61701 * 25.43680 * 11 9 8 27 27 H 1.09001 * 109.46859 * 304.99414 * 14 12 11 28 28 H 1.08997 * 109.47034 * 64.99586 * 14 12 11 29 29 H 1.09006 * 113.61139 * 334.57293 * 16 9 8 30 30 H 1.08995 * 113.61237 * 105.46992 * 16 9 8 31 31 H 1.07998 * 120.39609 * 179.97438 * 18 17 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 2.6472 -0.0264 2.2004 6 7 3.0701 -0.6789 3.2704 7 6 2.8245 -1.9727 3.4158 8 7 3.2863 -2.6253 4.5457 9 6 4.0364 -1.8855 5.5636 10 1 3.8045 -0.8205 5.5697 11 6 3.9882 -2.5343 6.9570 12 6 5.4731 -2.1597 7.0964 13 1 5.6355 -1.1698 7.5230 14 6 6.3179 -3.2429 7.7701 15 9 7.6214 -2.7698 7.9552 16 6 5.5442 -2.1877 5.5588 17 7 2.1477 -2.6568 2.5050 18 6 1.6926 -2.0634 1.4140 19 1 -0.3932 0.4418 0.7651 20 1 1.7923 -0.5139 -0.8900 21 1 1.5615 2.4679 -1.2085 22 1 1.5881 2.4585 1.2242 23 1 2.8545 1.0273 2.0853 24 1 3.1132 -3.5724 4.6635 25 1 3.3383 -2.0125 7.6595 26 1 3.8096 -3.6093 6.9323 27 1 5.8821 -3.4946 8.7370 28 1 6.3399 -4.1314 7.1391 29 1 5.7918 -3.1677 5.1509 30 1 6.1486 -1.3863 5.1340 31 1 1.1419 -2.6264 0.6749 There are 43 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 43 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_15744754_12175864.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 09:19:31 Heat of formation + Delta-G solvation = 2.072382 kcal Electronic energy + Delta-G solvation = -16659.270833 eV Core-core repulsion = 13664.846040 eV Total energy + Delta-G solvation = -2994.424793 eV No. of doubly occupied orbitals = 43 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 240.101 amu Computer time = 0.35 seconds Orbital eigenvalues (eV) -48.51801 -42.11356 -40.33409 -38.16970 -35.72915 -34.69237 -32.30863 -29.40270 -26.94318 -26.60170 -25.89523 -23.78080 -22.73691 -20.99769 -19.35875 -18.81705 -18.15425 -17.21619 -16.83687 -16.77892 -16.56739 -16.26615 -16.02573 -15.67211 -15.49767 -15.07763 -14.58643 -14.00457 -13.86198 -13.65373 -13.22601 -12.91204 -12.49942 -12.32027 -12.18348 -11.85669 -11.75962 -11.70328 -11.33232 -11.20521 -10.72947 -10.03088 -9.12719 -5.04091 0.05196 0.15540 1.20302 1.50141 1.78958 1.89880 2.78982 3.10851 3.22736 3.30233 3.30612 3.46318 3.60834 3.66340 3.70305 3.77556 3.96794 4.07656 4.12146 4.18489 4.45835 4.51304 4.52851 4.59237 4.69236 4.74314 4.87844 4.96034 5.10798 5.33401 5.77294 5.99076 6.32746 6.38838 7.28200 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.530 6.530 2 C -0.053 4.053 3 Si 0.679 3.321 4 C -0.292 4.292 5 C 0.198 3.802 6 N -0.562 5.562 7 C 0.567 3.433 8 N -0.685 5.685 9 C 0.140 3.860 10 H 0.122 0.878 11 C -0.139 4.139 12 C -0.143 4.143 13 H 0.107 0.893 14 C 0.073 3.927 15 F -0.217 7.217 16 C -0.147 4.147 17 N -0.570 5.570 18 C 0.224 3.776 19 H 0.376 0.624 20 H 0.120 0.880 21 H -0.253 1.253 22 H -0.258 1.258 23 H 0.167 0.833 24 H 0.415 0.585 25 H 0.082 0.918 26 H 0.091 0.909 27 H 0.077 0.923 28 H 0.075 0.925 29 H 0.087 0.913 30 H 0.078 0.922 31 H 0.170 0.830 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.508 -0.003 0.679 0.848 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.336 6.336 2 C -0.164 4.164 3 Si 0.580 3.420 4 C -0.300 4.300 5 C 0.030 3.970 6 N -0.284 5.284 7 C 0.211 3.789 8 N -0.320 5.320 9 C 0.034 3.966 10 H 0.140 0.860 11 C -0.178 4.178 12 C -0.162 4.162 13 H 0.126 0.874 14 C 0.018 3.982 15 F -0.198 7.198 16 C -0.186 4.186 17 N -0.291 5.291 18 C 0.055 3.945 19 H 0.223 0.777 20 H 0.138 0.862 21 H -0.177 1.177 22 H -0.183 1.183 23 H 0.183 0.817 24 H 0.253 0.747 25 H 0.101 0.899 26 H 0.109 0.891 27 H 0.095 0.905 28 H 0.093 0.907 29 H 0.105 0.895 30 H 0.097 0.903 31 H 0.187 0.813 Dipole moment (debyes) X Y Z Total from point charges 0.850 0.149 1.119 1.414 hybrid contribution -1.392 -0.135 -0.164 1.408 sum -0.542 0.014 0.956 1.099 Atomic orbital electron populations 1.86616 1.17768 1.79867 1.49330 1.24670 0.83758 1.10556 0.97449 0.95173 0.91507 0.74565 0.80735 1.21647 1.09059 0.97751 1.01590 1.22845 0.88090 0.99430 0.86617 1.67910 1.27134 1.08296 1.25086 1.19448 0.86836 0.85568 0.87043 1.44218 1.58158 1.11865 1.17770 1.22524 0.90498 0.97919 0.85609 0.86049 1.23367 0.95775 1.01985 0.96639 1.23031 0.95545 1.00729 0.96944 0.87432 1.21979 0.78019 0.96431 1.01770 1.92787 1.39759 1.90386 1.96841 1.23637 0.97009 1.03243 0.94733 1.68002 1.16605 1.40034 1.04489 1.22848 0.89109 0.90971 0.91534 0.77664 0.86209 1.17732 1.18259 0.81659 0.74741 0.89908 0.89082 0.90509 0.90650 0.89453 0.90283 0.81262 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.07 12.85 -35.23 -0.45 -0.52 16 2 C -0.05 0.07 2.83 36.01 0.10 0.18 16 3 Si 0.68 -1.34 29.94 -169.99 -5.09 -6.43 16 4 C -0.29 0.09 5.36 -104.35 -0.56 -0.47 16 5 C 0.20 0.03 9.92 -17.22 -0.17 -0.14 16 6 N -0.56 -1.13 9.15 -13.93 -0.13 -1.26 16 7 C 0.57 1.26 8.43 -322.80 -2.72 -1.46 16 8 N -0.68 0.02 5.51 -55.00 -0.30 -0.28 16 9 C 0.14 -0.18 4.22 -67.12 -0.28 -0.46 16 10 H 0.12 -0.03 7.41 -51.93 -0.38 -0.41 16 11 C -0.14 0.42 7.39 -25.92 -0.19 0.23 16 12 C -0.14 0.31 4.10 -89.72 -0.37 -0.06 16 13 H 0.11 -0.21 8.14 -51.93 -0.42 -0.63 16 14 C 0.07 -0.12 7.39 37.16 0.27 0.15 16 15 F -0.22 -0.46 17.36 2.25 0.04 -0.42 16 16 C -0.15 0.20 7.45 -25.83 -0.19 0.01 16 17 N -0.57 -1.43 10.46 -13.93 -0.15 -1.58 16 18 C 0.22 0.18 10.99 -17.23 -0.19 -0.01 16 19 H 0.38 -0.92 8.70 45.56 0.40 -0.52 16 20 H 0.12 -0.28 7.96 -51.93 -0.41 -0.69 16 21 H -0.25 -0.36 7.11 56.52 0.40 0.04 16 22 H -0.26 0.04 7.03 56.52 0.40 0.44 16 23 H 0.17 -0.35 5.01 -52.49 -0.26 -0.61 16 24 H 0.41 -0.51 8.83 -40.82 -0.36 -0.87 16 25 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 26 H 0.09 -0.35 8.07 -51.93 -0.42 -0.77 16 27 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 28 H 0.08 -0.21 7.85 -51.93 -0.41 -0.62 16 29 H 0.09 -0.12 7.90 -51.93 -0.41 -0.53 16 30 H 0.08 -0.04 8.14 -51.93 -0.42 -0.46 16 31 H 0.17 -0.17 8.06 -52.49 -0.42 -0.59 16 LS Contribution 269.84 15.07 4.07 4.07 Total: 0.00 -6.14 269.84 -9.89 -16.03 By element: Atomic # 1 Polarization: -4.00 SS G_CDS: -3.58 Total: -7.58 kcal Atomic # 6 Polarization: 2.27 SS G_CDS: -4.30 Total: -2.03 kcal Atomic # 7 Polarization: -2.55 SS G_CDS: -0.58 Total: -3.12 kcal Atomic # 8 Polarization: -0.07 SS G_CDS: -0.45 Total: -0.52 kcal Atomic # 9 Polarization: -0.46 SS G_CDS: 0.04 Total: -0.42 kcal Atomic # 14 Polarization: -1.34 SS G_CDS: -5.09 Total: -6.43 kcal Total LS contribution 4.07 Total: 4.07 kcal Total: -6.14 -9.89 -16.03 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_15744754_12175864.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 18.102 kcal (2) G-P(sol) polarization free energy of solvation -6.141 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 11.960 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.888 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.029 kcal (6) G-S(sol) free energy of system = (1) + (5) 2.072 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.35 seconds