Wall clock time and date at job start Mon Mar 8 2021 09:19:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86306 * 109.46788 * 2 1 4 4 C 1.50700 * 109.47214 * 240.00755 * 2 1 3 5 5 C 1.38844 * 120.33327 * 299.99799 * 4 2 1 6 6 C 1.38343 * 118.50587 * 180.02562 * 5 4 2 7 7 C 1.39098 * 119.09602 * 359.97438 * 6 5 4 8 8 N 1.39005 * 119.70058 * 179.97438 * 7 6 5 9 9 C 1.46498 * 120.00317 * 359.71765 * 8 7 6 10 10 H 1.09002 * 112.84935 * 25.34040 * 9 8 7 11 11 C 1.53787 * 113.61634 * 156.53267 * 9 8 7 12 12 C 1.53774 * 87.08099 * 139.98299 * 11 9 8 13 13 H 1.09000 * 113.61660 * 89.11992 * 12 11 9 14 14 C 1.53002 * 113.61513 * 219.93566 * 12 11 9 15 15 F 1.39908 * 109.46776 * 300.00140 * 14 12 11 16 16 C 1.53778 * 113.61655 * 254.14127 * 9 8 7 17 17 N 1.32422 * 120.59378 * 0.25262 * 7 6 5 18 18 C 1.31947 * 121.62053 * 359.47695 * 17 7 6 19 19 H 0.96701 * 114.00506 * 59.99799 * 1 2 3 20 20 H 1.08999 * 109.47697 * 120.00202 * 2 1 3 21 21 H 1.48500 * 109.99711 * 60.00472 * 3 2 1 22 22 H 1.48500 * 109.99849 * 181.32108 * 3 2 1 23 23 H 1.07994 * 120.74785 * 0.04198 * 5 4 2 24 24 H 1.07996 * 120.44955 * 180.02562 * 6 5 4 25 25 H 0.97005 * 119.99733 * 179.97438 * 8 7 6 26 26 H 1.09000 * 113.61047 * 254.53484 * 11 9 8 27 27 H 1.09001 * 113.60931 * 25.34940 * 11 9 8 28 28 H 1.09002 * 109.47372 * 59.99934 * 14 12 11 29 29 H 1.08997 * 109.46973 * 180.02562 * 14 12 11 30 30 H 1.09000 * 113.61285 * 334.56420 * 16 9 8 31 31 H 1.08997 * 113.61755 * 105.46979 * 16 9 8 32 32 H 1.08002 * 119.57292 * 180.24140 * 18 17 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7102 -1.2305 5 6 1.6002 -2.0394 -1.4573 6 6 2.0824 -2.6545 -2.5988 7 6 2.8776 -1.9244 -3.4760 8 7 3.3692 -2.5301 -4.6265 9 6 3.0544 -3.9330 -4.9076 10 1 2.1280 -4.2615 -4.4364 11 6 3.1509 -4.2994 -6.3981 12 6 3.7888 -5.6249 -5.9501 13 1 3.0639 -6.4173 -5.7635 14 6 4.9487 -6.0781 -6.8391 15 9 4.4901 -6.2570 -8.1487 16 6 4.2366 -4.8884 -4.6745 17 7 3.1750 -0.6593 -3.2222 18 6 2.7250 -0.0457 -2.1442 19 1 -0.3934 0.4417 -0.7650 20 1 1.7924 -0.5138 0.8899 21 1 1.5614 2.4678 1.2086 22 1 3.5345 1.7704 -0.0322 23 1 0.9800 -2.5809 -0.7584 24 1 1.8439 -3.6871 -2.8064 25 1 3.9239 -2.0249 -5.2414 26 1 2.1815 -4.4225 -6.8810 27 1 3.8265 -3.6569 -6.9627 28 1 5.7321 -5.3203 -6.8288 29 1 5.3485 -7.0197 -6.4627 30 1 5.2108 -4.4082 -4.7668 31 1 4.1426 -5.4864 -3.7681 32 1 2.9850 0.9883 -1.9717 There are 43 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 43 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_15744754_13915762.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 09:19:33 Heat of formation + Delta-G solvation = -14.373015 kcal Electronic energy + Delta-G solvation = -16525.566287 eV Core-core repulsion = 13595.854279 eV Total energy + Delta-G solvation = -2929.712007 eV No. of doubly occupied orbitals = 43 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 239.106 amu Computer time = 0.35 seconds Orbital eigenvalues (eV) -48.56444 -41.52044 -40.24287 -37.89116 -35.53796 -33.38326 -31.48359 -29.36957 -26.93383 -26.37421 -24.90375 -23.68506 -22.19913 -20.92468 -18.80001 -18.47000 -17.76595 -17.21196 -16.79524 -16.55351 -16.47170 -16.17052 -16.04177 -15.36150 -15.18318 -14.92658 -14.26608 -14.04230 -13.72484 -13.63598 -13.40504 -13.11531 -12.66158 -12.31227 -11.99393 -11.94760 -11.78910 -11.48503 -11.10931 -10.73603 -10.39001 -10.38343 -8.72083 -5.03268 0.23573 0.42076 1.31197 1.62998 1.98186 2.03770 2.82841 3.16588 3.22698 3.42148 3.47579 3.55378 3.59373 3.77771 3.85886 3.91215 4.00314 4.02659 4.12517 4.32805 4.40856 4.49073 4.53052 4.57044 4.65424 4.72275 4.80917 4.85675 4.99704 5.09698 5.31460 5.51465 5.97653 6.50386 6.59045 7.14754 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.543 6.543 2 C -0.052 4.052 3 Si 0.682 3.318 4 C -0.236 4.236 5 C -0.005 4.005 6 C -0.240 4.240 7 C 0.407 3.593 8 N -0.712 5.712 9 C 0.131 3.869 10 H 0.112 0.888 11 C -0.136 4.136 12 C -0.145 4.145 13 H 0.105 0.895 14 C 0.072 3.928 15 F -0.216 7.216 16 C -0.147 4.147 17 N -0.540 5.540 18 C 0.156 3.844 19 H 0.379 0.621 20 H 0.112 0.888 21 H -0.253 1.253 22 H -0.256 1.256 23 H 0.136 0.864 24 H 0.133 0.867 25 H 0.407 0.593 26 H 0.081 0.919 27 H 0.091 0.909 28 H 0.075 0.925 29 H 0.077 0.923 30 H 0.091 0.909 31 H 0.078 0.922 32 H 0.155 0.845 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.254 -0.975 -0.925 1.368 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.348 6.348 2 C -0.164 4.164 3 Si 0.584 3.416 4 C -0.241 4.241 5 C -0.031 4.031 6 C -0.264 4.264 7 C 0.172 3.828 8 N -0.343 5.343 9 C 0.025 3.975 10 H 0.130 0.870 11 C -0.174 4.174 12 C -0.164 4.164 13 H 0.124 0.876 14 C 0.017 3.983 15 F -0.197 7.197 16 C -0.186 4.186 17 N -0.256 5.256 18 C -0.002 4.002 19 H 0.226 0.774 20 H 0.129 0.871 21 H -0.178 1.178 22 H -0.181 1.181 23 H 0.154 0.846 24 H 0.151 0.849 25 H 0.243 0.757 26 H 0.100 0.900 27 H 0.109 0.891 28 H 0.093 0.907 29 H 0.095 0.905 30 H 0.109 0.891 31 H 0.097 0.903 32 H 0.171 0.829 Dipole moment (debyes) X Y Z Total from point charges 0.776 -0.428 -0.588 1.064 hybrid contribution -0.164 -0.968 0.445 1.078 sum 0.612 -1.395 -0.143 1.530 Atomic orbital electron populations 1.86487 1.17344 1.81673 1.49290 1.24780 0.85009 1.09675 0.96945 0.94843 0.81078 0.78156 0.87498 1.20998 1.06015 0.96659 1.00440 1.21190 0.93802 0.93199 0.94910 1.21474 1.05540 1.01874 0.97531 1.18436 0.89024 0.88457 0.86885 1.44538 1.55889 1.11310 1.22557 1.22534 0.98543 0.79811 0.96606 0.87029 1.23329 1.02472 0.96053 0.95567 1.23031 0.98808 0.97789 0.96809 0.87646 1.21934 0.96001 1.02694 0.77629 1.92789 1.90864 1.97011 1.39019 1.23588 0.99735 0.97748 0.97507 1.67153 1.27112 1.09181 1.22203 1.22227 0.91457 0.98534 0.87937 0.77417 0.87085 1.17802 1.18110 0.84635 0.84906 0.75703 0.90000 0.89065 0.90679 0.90496 0.89076 0.90318 0.82851 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.08 12.78 -35.23 -0.45 -0.53 16 2 C -0.05 0.01 2.84 36.01 0.10 0.11 16 3 Si 0.68 -0.67 29.82 -169.99 -5.07 -5.74 16 4 C -0.24 -0.12 5.40 -104.46 -0.56 -0.69 16 5 C -0.01 0.00 9.77 -39.32 -0.38 -0.39 16 6 C -0.24 -0.10 9.29 -39.22 -0.36 -0.47 16 7 C 0.41 0.59 7.65 -155.01 -1.19 -0.59 16 8 N -0.71 0.42 5.53 -53.15 -0.29 0.13 16 9 C 0.13 -0.31 3.99 -67.12 -0.27 -0.58 16 10 H 0.11 -0.32 6.16 -51.93 -0.32 -0.64 16 11 C -0.14 0.34 7.26 -25.92 -0.19 0.15 16 12 C -0.15 0.41 4.13 -89.72 -0.37 0.04 16 13 H 0.11 -0.34 8.14 -51.93 -0.42 -0.76 16 14 C 0.07 -0.15 7.41 37.16 0.28 0.13 16 15 F -0.22 -0.33 17.22 2.25 0.04 -0.29 16 16 C -0.15 0.44 7.45 -25.83 -0.19 0.25 16 17 N -0.54 -1.42 10.39 -12.44 -0.13 -1.55 16 18 C 0.16 0.18 9.84 -17.57 -0.17 0.00 16 19 H 0.38 -1.33 8.70 45.56 0.40 -0.94 16 20 H 0.11 0.02 7.96 -51.93 -0.41 -0.40 16 21 H -0.25 -0.56 7.11 56.52 0.40 -0.16 16 22 H -0.26 -0.35 7.11 56.52 0.40 0.05 16 23 H 0.14 -0.08 8.06 -52.49 -0.42 -0.50 16 24 H 0.13 -0.19 6.06 -52.49 -0.32 -0.51 16 25 H 0.41 -0.38 8.84 -40.82 -0.36 -0.74 16 26 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 27 H 0.09 -0.22 8.07 -51.93 -0.42 -0.63 16 28 H 0.07 -0.23 7.96 -51.93 -0.41 -0.64 16 29 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 30 H 0.09 -0.25 7.98 -51.93 -0.41 -0.66 16 31 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 32 H 0.15 -0.13 4.88 -52.49 -0.26 -0.39 16 LS Contribution 272.18 15.07 4.10 4.10 Total: 0.00 -5.83 272.18 -8.94 -14.77 By element: Atomic # 1 Polarization: -5.02 SS G_CDS: -3.83 Total: -8.85 kcal Atomic # 6 Polarization: 1.28 SS G_CDS: -3.31 Total: -2.03 kcal Atomic # 7 Polarization: -1.00 SS G_CDS: -0.42 Total: -1.42 kcal Atomic # 8 Polarization: -0.08 SS G_CDS: -0.45 Total: -0.53 kcal Atomic # 9 Polarization: -0.33 SS G_CDS: 0.04 Total: -0.29 kcal Atomic # 14 Polarization: -0.67 SS G_CDS: -5.07 Total: -5.74 kcal Total LS contribution 4.10 Total: 4.10 kcal Total: -5.83 -8.94 -14.77 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_15744754_13915762.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 0.400 kcal (2) G-P(sol) polarization free energy of solvation -5.830 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -5.430 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.943 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.773 kcal (6) G-S(sol) free energy of system = (1) + (5) -14.373 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.35 seconds