Wall clock time and date at job start Mon Mar 8 2021 09:19:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86307 * 109.46795 * 2 1 4 4 C 1.50694 * 109.47043 * 119.99921 * 2 1 3 5 5 C 1.37989 * 120.32706 * 244.98119 * 4 2 1 6 6 N 1.32009 * 120.90398 * 179.74920 * 5 4 2 7 7 C 1.32340 * 121.64322 * 0.55904 * 6 5 4 8 8 N 1.39145 * 119.72056 * 179.71558 * 7 6 5 9 9 C 1.46494 * 119.99612 * 359.72587 * 8 7 6 10 10 H 1.09000 * 112.91148 * 23.75317 * 9 8 7 11 11 C 1.53786 * 113.61370 * 155.00086 * 9 8 7 12 12 C 1.53781 * 87.17350 * 140.02367 * 11 9 8 13 13 H 1.09003 * 113.61462 * 89.16045 * 12 11 9 14 14 C 1.52991 * 113.61529 * 219.97788 * 12 11 9 15 15 F 1.39899 * 109.47522 * 184.99881 * 14 12 11 16 16 C 1.53781 * 87.08070 * 334.52830 * 12 11 9 17 17 C 1.39344 * 120.56281 * 359.43841 * 7 6 5 18 18 F 1.35099 * 120.47426 * 180.25295 * 17 7 6 19 19 C 1.38447 * 119.05816 * 0.27704 * 17 7 6 20 20 H 0.96704 * 114.00411 * 60.00072 * 1 2 3 21 21 H 1.08995 * 109.47062 * 240.00165 * 2 1 3 22 22 H 1.48497 * 109.99950 * 59.99981 * 3 2 1 23 23 H 1.48497 * 109.99587 * 181.31792 * 3 2 1 24 24 H 1.08004 * 119.54951 * 0.02562 * 5 4 2 25 25 H 0.97000 * 119.99851 * 179.72555 * 8 7 6 26 26 H 1.09002 * 113.61357 * 25.43283 * 11 9 8 27 27 H 1.09002 * 113.61608 * 254.61445 * 11 9 8 28 28 H 1.08997 * 109.47550 * 304.99814 * 14 12 11 29 29 H 1.09002 * 109.47334 * 65.00084 * 14 12 11 30 30 H 1.09005 * 113.61471 * 139.98321 * 16 12 11 31 31 H 1.09003 * 113.61469 * 270.88099 * 16 12 11 32 32 H 1.08001 * 120.75767 * 180.02562 * 19 17 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7566 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 2.6384 -0.0202 2.1936 6 7 3.0795 -0.6300 3.2781 7 6 2.8733 -1.9214 3.4809 8 7 3.3612 -2.5248 4.6359 9 6 4.1048 -1.7323 5.6182 10 1 3.8720 -0.6686 5.5691 11 6 4.0517 -2.3093 7.0427 12 6 5.5348 -1.9242 7.1722 13 1 5.6922 -0.9133 7.5485 14 6 6.3776 -2.9691 7.9059 15 9 7.6789 -2.4840 8.0748 16 6 5.6156 -2.0327 5.6403 17 6 2.1667 -2.6808 2.5505 18 9 1.9529 -3.9979 2.7618 19 6 1.6874 -2.0665 1.4061 20 1 -0.3934 0.4417 -0.7651 21 1 1.7923 -0.5138 -0.8900 22 1 1.5614 2.4679 1.2085 23 1 3.5345 1.7704 -0.0321 24 1 2.8299 1.0344 2.0604 25 1 3.2090 -3.4702 4.7905 26 1 3.8757 -3.3846 7.0719 27 1 3.3963 -1.7547 7.7143 28 1 5.9361 -3.1721 8.8816 29 1 6.4058 -3.8888 7.3215 30 1 6.2226 -1.2539 5.1788 31 1 5.8672 -3.0324 5.2861 32 1 1.1360 -2.6288 0.6670 There are 46 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 46 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_15744754_17656566.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 09:19:39 Heat of formation + Delta-G solvation = -57.976052 kcal Electronic energy + Delta-G solvation = -18761.436279 eV Core-core repulsion = 15360.379527 eV Total energy + Delta-G solvation = -3401.056753 eV No. of doubly occupied orbitals = 46 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 257.097 amu Computer time = 0.40 seconds Orbital eigenvalues (eV) -49.89284 -48.52076 -41.49589 -40.22294 -37.92145 -35.74969 -33.29036 -31.62316 -29.31606 -26.90917 -26.47260 -25.28642 -23.26633 -22.56122 -21.00005 -19.24715 -18.65739 -18.38095 -18.01870 -17.19202 -16.92901 -16.80587 -16.75275 -16.50611 -15.80963 -15.48029 -15.14649 -14.99861 -14.85329 -14.37554 -13.97312 -13.92678 -13.72297 -13.63865 -12.93387 -12.62985 -12.43544 -12.25273 -12.08749 -11.71209 -11.32105 -11.19346 -10.77137 -10.68387 -10.35662 -8.79187 -5.05535 -0.10879 0.10043 1.19375 1.58130 1.88254 1.92365 2.48531 3.01964 3.14158 3.23821 3.29760 3.33780 3.51559 3.62277 3.66769 3.81525 3.94595 4.04709 4.07772 4.14790 4.23359 4.44721 4.47679 4.51670 4.59890 4.63785 4.74012 4.88320 4.94978 4.96971 5.15888 5.40709 5.91128 6.14092 6.55292 6.91021 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.547 6.547 2 C -0.059 4.059 3 Si 0.682 3.318 4 C -0.163 4.163 5 C 0.143 3.857 6 N -0.511 5.511 7 C 0.390 3.610 8 N -0.706 5.706 9 C 0.136 3.864 10 H 0.121 0.879 11 C -0.140 4.140 12 C -0.143 4.143 13 H 0.107 0.893 14 C 0.073 3.927 15 F -0.217 7.217 16 C -0.148 4.148 17 C -0.018 4.018 18 F -0.132 7.132 19 C -0.035 4.035 20 H 0.384 0.616 21 H 0.076 0.924 22 H -0.247 1.247 23 H -0.251 1.251 24 H 0.155 0.845 25 H 0.413 0.587 26 H 0.090 0.910 27 H 0.082 0.918 28 H 0.077 0.923 29 H 0.075 0.925 30 H 0.077 0.923 31 H 0.086 0.914 32 H 0.151 0.849 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.757 0.897 -2.951 3.550 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.353 6.353 2 C -0.171 4.171 3 Si 0.582 3.418 4 C -0.168 4.168 5 C -0.014 4.014 6 N -0.228 5.228 7 C 0.152 3.848 8 N -0.338 5.338 9 C 0.031 3.969 10 H 0.139 0.861 11 C -0.178 4.178 12 C -0.162 4.162 13 H 0.125 0.875 14 C 0.018 3.982 15 F -0.198 7.198 16 C -0.187 4.187 17 C -0.045 4.045 18 F -0.111 7.111 19 C -0.061 4.061 20 H 0.232 0.768 21 H 0.094 0.906 22 H -0.172 1.172 23 H -0.176 1.176 24 H 0.172 0.828 25 H 0.250 0.750 26 H 0.108 0.892 27 H 0.100 0.900 28 H 0.095 0.905 29 H 0.093 0.907 30 H 0.096 0.904 31 H 0.105 0.895 32 H 0.169 0.831 Dipole moment (debyes) X Y Z Total from point charges -0.604 1.724 -1.190 2.180 hybrid contribution -0.464 -1.665 -0.375 1.769 sum -1.068 0.059 -1.566 1.896 Atomic orbital electron populations 1.86498 1.17177 1.81854 1.49805 1.24464 0.85757 1.10264 0.96568 0.95085 0.81018 0.77955 0.87714 1.19925 1.04519 0.93929 0.98433 1.22165 0.92607 0.98938 0.87692 1.67253 1.25206 1.07452 1.22884 1.18444 0.90378 0.88847 0.87172 1.44573 1.58902 1.11822 1.18507 1.22533 0.90580 0.97386 0.86402 0.86092 1.23368 0.95744 1.02142 0.96580 1.22996 0.95633 1.00933 0.96684 0.87465 1.21977 0.78105 0.96513 1.01587 1.92786 1.39963 1.90012 1.97018 1.23655 0.97168 1.03079 0.94807 1.17976 1.08513 0.79589 0.98382 1.91492 1.93653 1.31059 1.94898 1.21275 0.95248 0.94328 0.95246 0.76842 0.90588 1.17156 1.17561 0.82842 0.74964 0.89194 0.89956 0.90493 0.90687 0.90439 0.89518 0.83084 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.33 12.82 -35.23 -0.45 -0.13 16 2 C -0.06 0.05 2.81 36.00 0.10 0.15 16 3 Si 0.68 -1.32 29.88 -169.99 -5.08 -6.40 16 4 C -0.16 -0.30 5.39 -104.47 -0.56 -0.87 16 5 C 0.14 0.39 9.84 -17.57 -0.17 0.22 16 6 N -0.51 -1.85 9.13 -12.36 -0.11 -1.96 16 7 C 0.39 1.11 7.49 -154.85 -1.16 -0.05 16 8 N -0.71 -0.49 5.51 -52.92 -0.29 -0.78 16 9 C 0.14 -0.03 4.28 -66.98 -0.29 -0.31 16 10 H 0.12 0.12 7.41 -51.93 -0.38 -0.26 16 11 C -0.14 0.29 7.39 -25.92 -0.19 0.10 16 12 C -0.14 0.19 4.10 -89.81 -0.37 -0.18 16 13 H 0.11 -0.11 8.14 -51.93 -0.42 -0.54 16 14 C 0.07 -0.07 7.39 37.15 0.27 0.20 16 15 F -0.22 -0.59 17.36 2.25 0.04 -0.55 16 16 C -0.15 0.06 7.44 -25.78 -0.19 -0.13 16 17 C -0.02 -0.05 7.35 -39.09 -0.29 -0.34 16 18 F -0.13 -0.36 16.65 2.25 0.04 -0.32 16 19 C -0.03 -0.07 9.82 -39.26 -0.39 -0.45 16 20 H 0.38 -2.16 8.74 45.56 0.40 -1.76 16 21 H 0.08 -0.20 7.96 -51.93 -0.41 -0.62 16 22 H -0.25 -0.27 7.05 56.52 0.40 0.13 16 23 H -0.25 -0.12 7.11 56.52 0.40 0.28 16 24 H 0.15 0.25 4.87 -52.48 -0.26 -0.01 16 25 H 0.41 -0.30 8.20 -40.82 -0.33 -0.64 16 26 H 0.09 -0.27 8.08 -51.93 -0.42 -0.69 16 27 H 0.08 -0.18 8.14 -51.93 -0.42 -0.61 16 28 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 29 H 0.07 -0.16 7.84 -51.93 -0.41 -0.57 16 30 H 0.08 0.04 8.14 -51.93 -0.42 -0.38 16 31 H 0.09 -0.05 7.90 -51.93 -0.41 -0.46 16 32 H 0.15 0.05 8.06 -52.49 -0.42 -0.37 16 LS Contribution 280.41 15.07 4.23 4.23 Total: 0.00 -6.26 280.41 -8.40 -14.66 By element: Atomic # 1 Polarization: -3.56 SS G_CDS: -3.54 Total: -7.10 kcal Atomic # 6 Polarization: 1.58 SS G_CDS: -3.23 Total: -1.65 kcal Atomic # 7 Polarization: -2.34 SS G_CDS: -0.40 Total: -2.74 kcal Atomic # 8 Polarization: 0.33 SS G_CDS: -0.45 Total: -0.13 kcal Atomic # 9 Polarization: -0.95 SS G_CDS: 0.08 Total: -0.87 kcal Atomic # 14 Polarization: -1.32 SS G_CDS: -5.08 Total: -6.40 kcal Total LS contribution 4.23 Total: 4.23 kcal Total: -6.26 -8.40 -14.66 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_15744754_17656566.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -43.312 kcal (2) G-P(sol) polarization free energy of solvation -6.261 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -49.572 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.404 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.664 kcal (6) G-S(sol) free energy of system = (1) + (5) -57.976 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.40 seconds