Wall clock time and date at job start Mon Mar 8 2021 06:20:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 C 1.38405 * 119.99928 * 2 1 4 4 N 1.32494 * 119.22088 * 179.73398 * 3 2 1 5 5 C 1.32272 * 120.74414 * 179.75955 * 4 3 2 6 6 C 1.38606 * 119.19379 * 0.50690 * 5 4 3 7 7 C 1.50706 * 120.72111 * 179.77270 * 6 5 4 8 8 O 1.42895 * 109.47230 * 244.97484 * 7 6 5 9 9 Si 1.86305 * 109.46954 * 4.97241 * 7 6 5 10 10 C 1.38603 * 118.56259 * 359.74450 * 6 5 4 11 11 N 1.32283 * 119.19111 * 0.02562 * 10 6 5 12 12 C 1.46499 * 120.00136 * 180.02562 * 2 1 3 13 13 H 1.09004 * 109.46973 * 179.97438 * 12 2 1 14 14 C 1.52996 * 109.47349 * 299.99631 * 12 2 1 15 15 C 1.52992 * 109.47467 * 180.02562 * 14 12 2 16 16 C 1.53004 * 109.47082 * 299.99930 * 15 14 12 17 17 H 1.08998 * 109.47212 * 300.00489 * 16 15 14 18 18 C 1.50700 * 109.47218 * 180.02562 * 16 15 14 19 19 C 1.38237 * 119.99814 * 299.72512 * 18 16 15 20 20 C 1.38241 * 119.99764 * 179.78836 * 19 18 16 21 21 C 1.38235 * 119.99736 * 0.44513 * 20 19 18 22 22 C 1.38230 * 120.00362 * 359.80849 * 21 20 19 23 23 C 1.38234 * 119.99860 * 359.97438 * 22 21 20 24 24 C 1.52996 * 109.46934 * 60.00126 * 16 15 14 25 25 C 1.52998 * 109.47194 * 59.99930 * 12 2 1 26 26 H 1.08996 * 109.47008 * 90.00343 * 1 2 3 27 27 H 1.08997 * 109.46865 * 210.00028 * 1 2 3 28 28 H 1.08998 * 109.47058 * 329.99541 * 1 2 3 29 29 H 1.07997 * 120.40668 * 180.22914 * 5 4 3 30 30 H 1.08997 * 109.47342 * 124.97018 * 7 6 5 31 31 H 0.96701 * 114.00484 * 59.99460 * 8 7 6 32 32 H 1.48504 * 110.00045 * 58.68206 * 9 7 6 33 33 H 1.48501 * 110.00061 * 180.02562 * 9 7 6 34 34 H 1.08000 * 120.40445 * 179.97438 * 10 6 5 35 35 H 1.09009 * 109.47102 * 300.00533 * 14 12 2 36 36 H 1.08998 * 109.47017 * 59.99612 * 14 12 2 37 37 H 1.08998 * 109.47610 * 180.02562 * 15 14 12 38 38 H 1.08998 * 109.47497 * 59.99687 * 15 14 12 39 39 H 1.08005 * 120.00139 * 0.02562 * 19 18 16 40 40 H 1.08004 * 119.99564 * 180.27746 * 20 19 18 41 41 H 1.08000 * 119.99324 * 179.83598 * 21 20 19 42 42 H 1.07992 * 120.00429 * 179.97438 * 22 21 20 43 43 H 1.08000 * 120.00005 * 179.97438 * 23 22 21 44 44 H 1.09002 * 109.47587 * 180.02562 * 24 16 15 45 45 H 1.09004 * 109.47529 * 60.00064 * 24 16 15 46 46 H 1.09004 * 109.47239 * 299.99932 * 25 12 2 47 47 H 1.08998 * 109.47156 * 60.00056 * 25 12 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1570 1.1986 0.0000 4 7 3.4818 1.1806 0.0054 5 6 4.1734 2.3082 0.0008 6 6 3.4954 3.5171 0.0009 7 6 4.2489 4.8223 0.0009 8 8 3.9936 5.5197 1.2217 9 14 6.0748 4.4852 -0.1516 10 6 2.1095 3.4997 0.0005 11 7 1.4789 2.3369 0.0004 12 6 2.1975 -1.2687 -0.0006 13 1 3.2692 -1.0695 -0.0009 14 6 1.8280 -2.0715 1.2483 15 6 2.5935 -3.3962 1.2481 16 6 2.2244 -4.1983 -0.0015 17 1 1.1528 -4.3978 -0.0018 18 6 2.9779 -5.5034 -0.0015 19 6 4.3602 -5.5034 -0.0066 20 6 5.0515 -6.7006 -0.0022 21 6 4.3602 -7.8977 -0.0018 22 6 2.9779 -7.8977 -0.0019 23 6 2.2868 -6.7006 -0.0019 24 6 2.5939 -3.3955 -1.2504 25 6 1.8279 -2.0705 -1.2501 26 1 -0.3633 -0.0001 -1.0276 27 1 -0.3633 -0.8900 0.5138 28 1 -0.3633 0.8899 0.5139 29 1 5.2532 2.2871 0.0015 30 1 3.9204 5.4315 -0.8411 31 1 4.2616 5.0356 2.0147 32 1 6.3497 3.7324 -1.4018 33 1 6.8292 5.7644 -0.1522 34 1 1.5513 4.4242 0.0010 35 1 2.0913 -1.5003 2.1386 36 1 0.7564 -2.2707 1.2483 37 1 2.3299 -3.9684 2.1376 38 1 3.6650 -3.1967 1.2483 39 1 4.9003 -4.5680 -0.0103 40 1 6.1315 -6.7005 -0.0017 41 1 4.9003 -8.8329 -0.0010 42 1 2.4379 -8.8329 -0.0021 43 1 1.2068 -6.7006 -0.0024 44 1 2.3306 -3.9666 -2.1407 45 1 3.6656 -3.1959 -1.2502 46 1 0.7562 -2.2697 -1.2502 47 1 2.0912 -1.4985 -2.1399 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_15753750_12175864.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:20:49 Heat of formation + Delta-G solvation = 52.470617 kcal Electronic energy + Delta-G solvation = -27351.035959 eV Core-core repulsion = 23693.195536 eV Total energy + Delta-G solvation = -3657.840423 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 326.174 amu Computer time = 0.94 seconds Orbital eigenvalues (eV) -42.11647 -40.90634 -39.44820 -38.02534 -36.71182 -34.69639 -33.38296 -32.22548 -31.84219 -31.76963 -29.38985 -28.26867 -26.17955 -25.36131 -24.20078 -23.72609 -23.51111 -22.69719 -21.48383 -20.40513 -18.95148 -18.83286 -17.91926 -17.83643 -16.66522 -16.61770 -16.23415 -16.17308 -15.99716 -15.63500 -15.56581 -15.26228 -14.92409 -14.63937 -14.55774 -14.54016 -14.14908 -14.05944 -13.95907 -13.83678 -13.29637 -13.16014 -13.09715 -13.04162 -12.59033 -12.28875 -12.20613 -12.19617 -11.85859 -11.77518 -11.71248 -11.57096 -11.54459 -11.17862 -10.97409 -10.54182 -9.93722 -9.78834 -9.55739 -8.84311 -5.10372 0.11302 0.20788 0.47937 0.53152 1.23863 1.57157 1.63257 1.93357 2.86434 2.90059 3.16335 3.41798 3.50783 3.57687 3.65737 3.75268 3.76135 3.76767 3.91207 4.12037 4.17614 4.20043 4.21776 4.24462 4.27772 4.31542 4.42867 4.43955 4.46934 4.51332 4.60592 4.62401 4.65146 4.71322 4.80997 4.81994 4.89249 4.99808 5.04207 5.08969 5.09366 5.17373 5.19544 5.27130 5.31507 5.41294 5.61015 5.66786 5.75863 5.84941 5.90716 6.13492 6.42311 6.52999 7.29354 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.097 3.903 2 N -0.579 5.579 3 C 0.568 3.432 4 N -0.564 5.564 5 C 0.201 3.799 6 C -0.298 4.298 7 C -0.045 4.045 8 O -0.541 6.541 9 Si 0.679 3.321 10 C 0.223 3.777 11 N -0.568 5.568 12 C 0.153 3.847 13 H 0.110 0.890 14 C -0.128 4.128 15 C -0.106 4.106 16 C -0.049 4.049 17 H 0.079 0.921 18 C -0.077 4.077 19 C -0.115 4.115 20 C -0.118 4.118 21 C -0.125 4.125 22 C -0.119 4.119 23 C -0.118 4.118 24 C -0.106 4.106 25 C -0.127 4.127 26 H 0.052 0.948 27 H 0.071 0.929 28 H 0.081 0.919 29 H 0.165 0.835 30 H 0.115 0.885 31 H 0.379 0.621 32 H -0.255 1.255 33 H -0.251 1.251 34 H 0.169 0.831 35 H 0.068 0.932 36 H 0.067 0.933 37 H 0.069 0.931 38 H 0.069 0.931 39 H 0.121 0.879 40 H 0.121 0.879 41 H 0.120 0.880 42 H 0.121 0.879 43 H 0.120 0.880 44 H 0.068 0.932 45 H 0.068 0.932 46 H 0.066 0.934 47 H 0.066 0.934 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.670 -2.127 1.559 2.721 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.046 4.046 2 N -0.293 5.293 3 C 0.213 3.787 4 N -0.286 5.286 5 C 0.033 3.967 6 C -0.307 4.307 7 C -0.157 4.157 8 O -0.346 6.346 9 Si 0.581 3.419 10 C 0.055 3.945 11 N -0.289 5.289 12 C 0.049 3.951 13 H 0.128 0.872 14 C -0.166 4.166 15 C -0.144 4.144 16 C -0.067 4.067 17 H 0.097 0.903 18 C -0.077 4.077 19 C -0.133 4.133 20 C -0.136 4.136 21 C -0.143 4.143 22 C -0.137 4.137 23 C -0.136 4.136 24 C -0.144 4.144 25 C -0.166 4.166 26 H 0.071 0.929 27 H 0.090 0.910 28 H 0.099 0.901 29 H 0.182 0.818 30 H 0.132 0.868 31 H 0.226 0.774 32 H -0.180 1.180 33 H -0.175 1.175 34 H 0.186 0.814 35 H 0.086 0.914 36 H 0.085 0.915 37 H 0.088 0.912 38 H 0.087 0.913 39 H 0.139 0.861 40 H 0.139 0.861 41 H 0.138 0.862 42 H 0.139 0.861 43 H 0.138 0.862 44 H 0.087 0.913 45 H 0.087 0.913 46 H 0.085 0.915 47 H 0.085 0.915 Dipole moment (debyes) X Y Z Total from point charges 0.521 -2.632 0.671 2.766 hybrid contribution -0.153 0.838 -0.363 0.926 sum 0.368 -1.794 0.309 1.858 Atomic orbital electron populations 1.21653 0.77731 1.03330 1.01870 1.46203 1.05765 1.01400 1.75906 1.19333 0.85235 0.86436 0.87667 1.67849 1.06976 1.31327 1.22450 1.22737 0.99563 0.86521 0.87868 1.21676 0.97166 0.97470 1.14348 1.24681 1.09551 0.91369 0.90124 1.86507 1.87006 1.46030 1.15060 0.95024 0.75718 0.83552 0.87644 1.22842 0.90945 0.95189 0.85518 1.68002 1.40755 0.97846 1.22336 1.21225 0.98189 0.81057 0.94592 0.87247 1.21917 1.00893 0.96041 0.97774 1.21547 1.00670 0.94706 0.97435 1.20220 0.99482 0.91597 0.95405 0.90293 1.19839 0.93801 0.94523 0.99490 1.21021 0.93730 0.98122 1.00397 1.21188 0.99997 0.92565 0.99892 1.21188 0.94481 0.98191 1.00441 1.21173 0.94490 0.98057 0.99933 1.21089 0.99784 0.92036 1.00694 1.21562 1.00642 0.94735 0.97455 1.21918 1.00905 0.95988 0.97760 0.92895 0.91007 0.90052 0.81795 0.86798 0.77397 1.18004 1.17549 0.81415 0.91363 0.91467 0.91240 0.91269 0.86071 0.86071 0.86154 0.86098 0.86191 0.91289 0.91299 0.91497 0.91522 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.10 -0.02 9.50 59.85 0.57 0.55 16 2 N -0.58 -0.75 2.86 -176.29 -0.50 -1.25 16 3 C 0.57 1.70 8.17 -322.81 -2.64 -0.94 16 4 N -0.56 -1.41 8.85 -13.93 -0.12 -1.53 16 5 C 0.20 0.09 9.92 -17.23 -0.17 -0.08 16 6 C -0.30 -0.04 5.36 -104.35 -0.56 -0.59 16 7 C -0.04 0.04 2.83 36.01 0.10 0.15 16 8 O -0.54 0.29 12.85 -35.23 -0.45 -0.16 16 9 Si 0.68 -1.17 29.88 -169.99 -5.08 -6.25 16 10 C 0.22 0.29 10.99 -17.22 -0.19 0.10 16 11 N -0.57 -1.73 9.11 -13.93 -0.13 -1.85 16 12 C 0.15 -0.01 2.54 -67.93 -0.17 -0.18 16 13 H 0.11 0.12 6.76 -51.93 -0.35 -0.23 16 14 C -0.13 0.13 5.18 -26.74 -0.14 -0.01 16 15 C -0.11 0.13 5.02 -26.73 -0.13 0.00 16 16 C -0.05 0.05 2.36 -91.77 -0.22 -0.16 16 17 H 0.08 -0.10 7.88 -51.93 -0.41 -0.51 16 18 C -0.08 -0.02 4.78 -104.62 -0.50 -0.52 16 19 C -0.11 -0.05 8.71 -39.58 -0.34 -0.39 16 20 C -0.12 -0.07 10.05 -39.58 -0.40 -0.47 16 21 C -0.12 -0.09 10.05 -39.59 -0.40 -0.49 16 22 C -0.12 -0.08 10.05 -39.59 -0.40 -0.48 16 23 C -0.12 -0.07 9.67 -39.58 -0.38 -0.45 16 24 C -0.11 0.11 5.02 -26.71 -0.13 -0.02 16 25 C -0.13 0.09 5.21 -26.70 -0.14 -0.05 16 26 H 0.05 -0.01 8.14 -51.93 -0.42 -0.44 16 27 H 0.07 -0.13 6.43 -51.93 -0.33 -0.46 16 28 H 0.08 0.05 7.33 -51.93 -0.38 -0.33 16 29 H 0.17 -0.37 5.07 -52.49 -0.27 -0.64 16 30 H 0.11 -0.09 7.96 -51.93 -0.41 -0.50 16 31 H 0.38 -1.57 8.70 45.56 0.40 -1.17 16 32 H -0.26 -0.17 7.11 56.52 0.40 0.23 16 33 H -0.25 -0.40 7.11 56.52 0.40 0.00 16 34 H 0.17 -0.08 8.06 -52.49 -0.42 -0.50 16 35 H 0.07 0.00 8.14 -51.92 -0.42 -0.42 16 36 H 0.07 -0.09 6.66 -51.93 -0.35 -0.44 16 37 H 0.07 -0.06 8.14 -51.93 -0.42 -0.49 16 38 H 0.07 -0.07 7.41 -51.93 -0.38 -0.46 16 39 H 0.12 -0.10 7.11 -52.48 -0.37 -0.47 16 40 H 0.12 -0.11 8.06 -52.48 -0.42 -0.54 16 41 H 0.12 -0.10 8.06 -52.49 -0.42 -0.52 16 42 H 0.12 -0.11 8.06 -52.49 -0.42 -0.53 16 43 H 0.12 -0.10 7.95 -52.49 -0.42 -0.52 16 44 H 0.07 -0.04 8.14 -51.93 -0.42 -0.47 16 45 H 0.07 -0.06 7.38 -51.93 -0.38 -0.44 16 46 H 0.07 -0.07 7.67 -51.93 -0.40 -0.46 16 47 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 LS Contribution 370.42 15.07 5.58 5.58 Total: 0.00 -6.19 370.42 -14.01 -20.21 By element: Atomic # 1 Polarization: -3.61 SS G_CDS: -7.06 Total: -10.68 kcal Atomic # 6 Polarization: 2.19 SS G_CDS: -6.24 Total: -4.06 kcal Atomic # 7 Polarization: -3.88 SS G_CDS: -0.75 Total: -4.64 kcal Atomic # 8 Polarization: 0.29 SS G_CDS: -0.45 Total: -0.16 kcal Atomic # 14 Polarization: -1.17 SS G_CDS: -5.08 Total: -6.25 kcal Total LS contribution 5.58 Total: 5.58 kcal Total: -6.19 -14.01 -20.21 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_15753750_12175864.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 72.677 kcal (2) G-P(sol) polarization free energy of solvation -6.195 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 66.483 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -14.012 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.207 kcal (6) G-S(sol) free energy of system = (1) + (5) 52.471 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.94 seconds