Wall clock time and date at job start Mon Mar 8 2021 08:51:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 C 1.52995 * 109.47215 * 2 1 4 4 C 1.52999 * 109.46600 * 240.00073 * 2 1 3 5 5 O 1.45202 * 109.47011 * 120.00165 * 2 1 3 6 6 C 1.34632 * 116.99897 * 59.99770 * 5 2 1 7 7 O 1.21513 * 120.00576 * 0.02562 * 6 5 2 8 8 N 1.34782 * 120.00149 * 179.97438 * 6 5 2 9 9 C 1.46497 * 120.00531 * 180.02562 * 8 6 5 10 10 H 1.09004 * 112.84520 * 336.19646 * 9 8 6 11 11 C 1.53950 * 113.53678 * 107.50501 * 9 8 6 12 12 C 1.53778 * 87.02264 * 89.18931 * 11 9 8 13 13 F 1.39903 * 113.61544 * 270.77356 * 12 11 9 14 14 C 1.52992 * 113.61675 * 139.95127 * 12 11 9 15 15 N 1.46499 * 109.47267 * 85.86500 * 14 12 11 16 16 C 1.38405 * 119.99936 * 180.02562 * 15 14 12 17 17 N 1.32494 * 119.22088 * 359.73198 * 16 15 14 18 18 C 1.32272 * 120.74414 * 179.75955 * 17 16 15 19 19 C 1.38606 * 119.19379 * 0.50690 * 18 17 16 20 20 C 1.50706 * 120.72111 * 179.77270 * 19 18 17 21 21 O 1.42895 * 109.47230 * 244.97484 * 20 19 18 22 22 Si 1.86305 * 109.46954 * 4.97241 * 20 19 18 23 23 C 1.38603 * 118.56259 * 359.74450 * 19 18 17 24 24 N 1.32283 * 119.19111 * 0.02562 * 23 19 18 25 25 C 1.53780 * 113.61578 * 205.00101 * 9 8 6 26 26 H 1.09000 * 109.47121 * 300.00435 * 1 2 3 27 27 H 1.09004 * 109.47467 * 59.99579 * 1 2 3 28 28 H 1.09004 * 109.47367 * 180.02562 * 1 2 3 29 29 H 1.08996 * 109.47268 * 180.02562 * 3 2 1 30 30 H 1.09005 * 109.47538 * 300.00099 * 3 2 1 31 31 H 1.09000 * 109.47431 * 59.99755 * 3 2 1 32 32 H 1.08998 * 109.47534 * 299.99764 * 4 2 1 33 33 H 1.08997 * 109.47433 * 60.00449 * 4 2 1 34 34 H 1.09000 * 109.46767 * 180.02562 * 4 2 1 35 35 H 0.97003 * 119.99309 * 359.97438 * 8 6 5 36 36 H 1.09001 * 113.66952 * 334.66220 * 11 9 8 37 37 H 1.09002 * 113.61615 * 203.71496 * 11 9 8 38 38 H 1.09004 * 109.47330 * 325.86404 * 14 12 11 39 39 H 1.09005 * 109.47124 * 205.86608 * 14 12 11 40 40 H 0.96999 * 119.99984 * 359.97438 * 15 14 12 41 41 H 1.07997 * 120.40668 * 180.22914 * 18 17 16 42 42 H 1.08997 * 109.47342 * 124.97018 * 20 19 18 43 43 H 0.96701 * 114.00484 * 59.99460 * 21 20 19 44 44 H 1.48501 * 110.00061 * 180.02562 * 22 20 19 45 45 H 1.48496 * 109.99985 * 301.32227 * 22 20 19 46 46 H 1.08000 * 120.40412 * 180.02562 * 23 19 18 47 47 H 1.09000 * 113.61425 * 156.33646 * 25 9 8 48 48 H 1.08997 * 113.61205 * 25.42703 * 25 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4424 0.0000 4 6 2.0399 -0.7213 -1.2493 5 8 2.0140 -0.6845 1.1856 6 6 1.6522 -1.9723 1.3383 7 8 0.9515 -2.5097 0.5035 8 7 2.0679 -2.6658 2.4166 9 6 1.6747 -4.0672 2.5826 10 1 0.7603 -4.3168 2.0444 11 6 2.8258 -5.0612 2.3433 12 6 3.1510 -4.9210 3.8398 13 9 4.0446 -3.8828 4.1243 14 6 3.5412 -6.2406 4.5084 15 7 4.9757 -6.4751 4.3259 16 6 5.5625 -7.6149 4.8476 17 7 4.8133 -8.4809 5.5141 18 6 5.3418 -9.5823 6.0214 19 6 6.6976 -9.8191 5.8576 20 6 7.3366 -11.0601 6.4256 21 8 8.2731 -10.6920 7.4402 22 14 6.0210 -12.1543 7.1624 23 6 7.4530 -8.8900 5.1595 24 7 6.8612 -7.8113 4.6737 25 6 1.6760 -4.5382 4.0465 26 1 -0.3633 0.5139 0.8899 27 1 -0.3634 0.5139 -0.8900 28 1 -0.3634 -1.0277 0.0005 29 1 3.1300 1.4425 -0.0005 30 1 1.6767 1.9564 -0.8900 31 1 1.6767 1.9563 0.8899 32 1 1.6766 -1.7489 -1.2493 33 1 1.6766 -0.2074 -2.1392 34 1 3.1299 -0.7217 -1.2491 35 1 2.6282 -2.2371 3.0824 36 1 3.6076 -4.6760 1.6887 37 1 2.4896 -6.0589 2.0611 38 1 2.9790 -7.0575 4.0558 39 1 3.3140 -6.1895 5.5733 40 1 5.5142 -5.8320 3.8387 41 1 4.7253 -10.2863 6.5605 42 1 7.8541 -11.5984 5.6316 43 1 7.8814 -10.2084 8.1804 44 1 6.6382 -13.3814 7.7266 45 1 5.2868 -11.4210 8.2247 46 1 8.5119 -9.0449 5.0139 47 1 1.0249 -5.3926 4.2308 48 1 1.5309 -3.7313 4.7648 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_27_15774726_12175864.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 08:51:32 Heat of formation + Delta-G solvation = -66.508952 kcal Electronic energy + Delta-G solvation = -31496.720025 eV Core-core repulsion = 26890.616792 eV Total energy + Delta-G solvation = -4606.103233 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 355.174 amu Computer time = 1.21 seconds Orbital eigenvalues (eV) -48.93023 -42.10374 -41.90713 -39.98993 -38.35298 -37.90041 -36.72572 -35.34857 -34.76065 -34.04995 -32.55285 -29.07472 -28.39306 -28.33249 -27.10375 -26.33891 -25.88031 -24.46103 -23.21268 -22.85379 -21.21591 -20.72909 -19.59714 -19.32181 -18.76414 -18.19461 -17.69412 -17.28817 -17.11405 -16.94899 -16.62884 -16.40932 -16.35878 -16.04507 -15.74708 -15.62158 -15.48755 -15.37205 -15.08177 -14.65216 -14.56706 -14.50086 -14.01344 -13.87120 -13.75343 -13.37114 -13.18279 -13.16917 -13.10315 -12.93828 -12.90195 -12.80795 -12.47692 -12.34328 -12.26924 -11.93430 -11.76281 -11.64749 -11.48783 -11.42653 -11.23484 -11.16864 -10.70197 -10.29067 -10.07461 -9.16342 -4.89548 0.03191 0.12347 1.07743 1.32837 1.61354 1.65535 1.72525 1.99956 2.76757 2.99157 3.02587 3.02865 3.12699 3.29759 3.43917 3.56246 3.61886 3.66967 3.70959 3.71880 3.76830 3.81500 3.91434 4.21848 4.35737 4.36510 4.47548 4.58656 4.58944 4.60067 4.63011 4.65738 4.73787 4.73809 4.77006 4.81004 4.84730 4.85785 4.88453 4.90712 5.10833 5.19285 5.24474 5.27421 5.39084 5.55151 5.69396 5.95458 6.28972 6.31130 6.49616 7.21894 7.26026 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.179 4.179 2 C 0.126 3.874 3 C -0.138 4.138 4 C -0.180 4.180 5 O -0.371 6.371 6 C 0.648 3.352 7 O -0.588 6.588 8 N -0.688 5.688 9 C 0.129 3.871 10 H 0.114 0.886 11 C -0.162 4.162 12 C 0.078 3.922 13 F -0.198 7.198 14 C 0.135 3.865 15 N -0.694 5.694 16 C 0.553 3.447 17 N -0.573 5.573 18 C 0.194 3.806 19 C -0.283 4.283 20 C -0.059 4.059 21 O -0.548 6.548 22 Si 0.763 3.237 23 C 0.213 3.787 24 N -0.593 5.593 25 C -0.138 4.138 26 H 0.062 0.938 27 H 0.087 0.913 28 H 0.065 0.935 29 H 0.067 0.933 30 H 0.100 0.900 31 H 0.069 0.931 32 H 0.065 0.935 33 H 0.088 0.912 34 H 0.059 0.941 35 H 0.413 0.587 36 H 0.072 0.928 37 H 0.134 0.866 38 H 0.105 0.895 39 H 0.080 0.920 40 H 0.416 0.584 41 H 0.190 0.810 42 H 0.131 0.869 43 H 0.385 0.615 44 H -0.301 1.301 45 H -0.277 1.277 46 H 0.182 0.818 47 H 0.151 0.849 48 H 0.096 0.904 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.209 -1.343 0.314 3.493 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.236 4.236 2 C 0.090 3.910 3 C -0.195 4.195 4 C -0.237 4.237 5 O -0.286 6.286 6 C 0.401 3.599 7 O -0.479 6.479 8 N -0.348 5.348 9 C 0.025 3.975 10 H 0.132 0.868 11 C -0.200 4.200 12 C 0.060 3.940 13 F -0.178 7.178 14 C 0.010 3.990 15 N -0.331 5.331 16 C 0.196 3.804 17 N -0.296 5.296 18 C 0.027 3.973 19 C -0.291 4.291 20 C -0.169 4.169 21 O -0.356 6.356 22 Si 0.668 3.332 23 C 0.045 3.955 24 N -0.315 5.315 25 C -0.176 4.176 26 H 0.081 0.919 27 H 0.106 0.894 28 H 0.084 0.916 29 H 0.086 0.914 30 H 0.118 0.882 31 H 0.088 0.912 32 H 0.084 0.916 33 H 0.107 0.893 34 H 0.078 0.922 35 H 0.250 0.750 36 H 0.091 0.909 37 H 0.152 0.848 38 H 0.123 0.877 39 H 0.098 0.902 40 H 0.254 0.746 41 H 0.206 0.794 42 H 0.149 0.851 43 H 0.234 0.766 44 H -0.229 1.229 45 H -0.204 1.204 46 H 0.199 0.801 47 H 0.169 0.831 48 H 0.115 0.885 Dipole moment (debyes) X Y Z Total from point charges -4.082 -1.260 -0.192 4.276 hybrid contribution 1.750 0.682 1.174 2.215 sum -2.332 -0.578 0.983 2.596 Atomic orbital electron populations 1.22472 0.93770 1.03829 1.03572 1.22381 0.94655 0.92524 0.81421 1.21897 1.02374 0.90971 1.04301 1.22472 1.01519 1.02335 0.97367 1.86321 1.71531 1.23342 1.47404 1.18275 0.78520 0.80735 0.82341 1.90903 1.42133 1.70967 1.43904 1.44490 1.54887 1.12018 1.23356 1.21957 0.99023 0.78067 0.98470 0.86794 1.24255 0.99025 1.02477 0.94281 1.22354 0.89693 0.84487 0.97509 1.92846 1.70153 1.60223 1.94595 1.21847 0.79780 0.95390 1.01936 1.44030 1.09767 1.20317 1.59011 1.19559 0.85463 0.87644 0.87731 1.67958 1.39657 1.05618 1.16360 1.23244 0.92364 0.91415 0.90270 1.21700 0.96480 1.02360 1.08557 1.24901 1.00640 0.97126 0.94225 1.86592 1.36989 1.77710 1.34293 0.94247 0.78726 0.75810 0.84423 1.23156 1.00797 0.85480 0.86028 1.67982 1.10540 1.25163 1.27815 1.24002 0.93424 1.04564 0.95609 0.91937 0.89378 0.91576 0.91369 0.88176 0.91189 0.91629 0.89339 0.92173 0.74979 0.90935 0.84770 0.87697 0.90227 0.74638 0.79416 0.85114 0.76565 1.22889 1.20364 0.80130 0.83111 0.88503 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.53 8.37 71.98 0.60 0.07 16 2 C 0.13 0.41 1.13 -10.80 -0.01 0.40 16 3 C -0.14 0.21 8.85 71.98 0.64 0.84 16 4 C -0.18 -0.62 8.37 71.98 0.60 -0.01 16 5 O -0.37 -2.33 9.94 -55.41 -0.55 -2.88 16 6 C 0.65 4.39 8.06 129.79 1.05 5.44 16 7 O -0.59 -6.50 11.48 19.80 0.23 -6.28 16 8 N -0.69 -0.68 5.19 -567.33 -2.94 -3.62 16 9 C 0.13 -0.42 4.33 45.58 0.20 -0.23 16 10 H 0.11 -0.19 7.46 -2.39 -0.02 -0.21 16 11 C -0.16 0.77 7.33 31.18 0.23 1.00 16 12 C 0.08 -0.40 1.71 -10.27 -0.02 -0.42 16 13 F -0.20 -0.02 15.57 44.97 0.70 0.68 16 14 C 0.13 -0.58 5.38 86.38 0.46 -0.11 16 15 N -0.69 -0.65 5.60 -351.05 -1.97 -2.61 16 16 C 0.55 2.55 8.43 261.49 2.20 4.75 16 17 N -0.57 -1.60 9.59 -197.99 -1.90 -3.49 16 18 C 0.19 -0.22 9.92 84.71 0.84 0.62 16 19 C -0.28 0.40 5.36 -19.69 -0.11 0.30 16 20 C -0.06 0.22 2.83 71.24 0.20 0.42 16 21 O -0.55 0.11 12.85 -148.98 -1.91 -1.80 16 22 Si 0.76 -3.91 29.95 68.60 2.05 -1.86 16 23 C 0.21 0.37 10.99 84.71 0.93 1.30 16 24 N -0.59 -3.49 10.46 -197.99 -2.07 -5.56 16 25 C -0.14 1.16 7.28 31.12 0.23 1.39 16 26 H 0.06 0.15 8.14 -2.39 -0.02 0.13 16 27 H 0.09 -0.05 8.14 -2.38 -0.02 -0.07 16 28 H 0.07 0.52 5.88 -2.39 -0.01 0.50 16 29 H 0.07 -0.09 8.14 -2.39 -0.02 -0.11 16 30 H 0.10 -0.50 8.14 -2.38 -0.02 -0.52 16 31 H 0.07 -0.12 8.14 -2.39 -0.02 -0.14 16 32 H 0.06 0.55 5.88 -2.39 -0.01 0.53 16 33 H 0.09 -0.02 8.14 -2.39 -0.02 -0.04 16 34 H 0.06 0.19 8.14 -2.39 -0.02 0.17 16 35 H 0.41 -0.28 7.88 -92.71 -0.73 -1.02 16 36 H 0.07 -0.06 8.14 -2.39 -0.02 -0.08 16 37 H 0.13 -1.13 7.92 -2.39 -0.02 -1.15 16 38 H 0.11 -0.71 7.88 -2.38 -0.02 -0.73 16 39 H 0.08 -0.28 8.14 -2.38 -0.02 -0.30 16 40 H 0.42 0.58 8.19 -92.71 -0.76 -0.18 16 41 H 0.19 -1.24 5.01 -2.91 -0.01 -1.25 16 42 H 0.13 -0.77 7.96 -2.39 -0.02 -0.79 16 43 H 0.39 -2.02 8.70 -74.06 -0.64 -2.66 16 44 H -0.30 -0.94 7.11 99.48 0.71 -0.23 16 45 H -0.28 0.51 7.02 99.48 0.70 1.21 16 46 H 0.18 -0.31 8.06 -2.91 -0.02 -0.33 16 47 H 0.15 -2.06 8.10 -2.39 -0.02 -2.08 16 48 H 0.10 -0.78 8.14 -2.39 -0.02 -0.80 16 Total: 0.00 -20.41 393.43 -1.40 -21.81 By element: Atomic # 1 Polarization: -9.06 SS G_CDS: -1.08 Total: -10.15 kcal Atomic # 6 Polarization: 7.72 SS G_CDS: 8.05 Total: 15.77 kcal Atomic # 7 Polarization: -6.41 SS G_CDS: -8.88 Total: -15.28 kcal Atomic # 8 Polarization: -8.72 SS G_CDS: -2.24 Total: -10.96 kcal Atomic # 9 Polarization: -0.02 SS G_CDS: 0.70 Total: 0.68 kcal Atomic # 14 Polarization: -3.91 SS G_CDS: 2.05 Total: -1.86 kcal Total: -20.41 -1.40 -21.81 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_15774726_12175864.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -44.701 kcal (2) G-P(sol) polarization free energy of solvation -20.411 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -65.112 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.397 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.808 kcal (6) G-S(sol) free energy of system = (1) + (5) -66.509 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.21 seconds