Wall clock time and date at job start Mon Mar 8 2021 08:51:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 C 1.52997 * 109.47466 * 2 1 4 4 C 1.53007 * 109.47074 * 239.99950 * 2 1 3 5 5 O 1.45198 * 109.47251 * 120.00457 * 2 1 3 6 6 C 1.34638 * 117.00127 * 59.99390 * 5 2 1 7 7 O 1.21515 * 120.00116 * 0.02562 * 6 5 2 8 8 N 1.34778 * 120.00168 * 180.02562 * 6 5 2 9 9 C 1.46498 * 120.00186 * 180.02562 * 8 6 5 10 10 H 1.08999 * 112.90525 * 336.24628 * 9 8 6 11 11 C 1.53778 * 113.61736 * 107.49948 * 9 8 6 12 12 C 1.53784 * 87.08081 * 89.11728 * 11 9 8 13 13 F 1.39898 * 113.61310 * 270.88745 * 12 11 9 14 14 C 1.52992 * 113.61673 * 139.98135 * 12 11 9 15 15 N 1.46503 * 109.47166 * 87.50094 * 14 12 11 16 16 C 1.39002 * 119.99844 * 180.02562 * 15 14 12 17 17 N 1.32403 * 119.70243 * 180.02562 * 16 15 14 18 18 C 1.31971 * 121.61889 * 180.02562 * 17 16 15 19 19 C 1.38020 * 120.85999 * 0.02562 * 18 17 16 20 20 C 1.50697 * 120.33400 * 180.02562 * 19 18 17 21 21 O 1.42903 * 109.47337 * 119.99967 * 20 19 18 22 22 Si 1.86303 * 109.47515 * 359.97438 * 20 19 18 23 23 C 1.38881 * 119.32910 * 359.97438 * 19 18 17 24 24 C 1.38300 * 118.50737 * 359.73569 * 23 19 18 25 25 C 1.53778 * 113.61412 * 205.00214 * 9 8 6 26 26 H 1.08995 * 109.46809 * 300.00059 * 1 2 3 27 27 H 1.09005 * 109.47099 * 59.99692 * 1 2 3 28 28 H 1.09001 * 109.47396 * 179.97438 * 1 2 3 29 29 H 1.08997 * 109.47001 * 179.97438 * 3 2 1 30 30 H 1.09002 * 109.47320 * 299.99722 * 3 2 1 31 31 H 1.08995 * 109.47154 * 60.00153 * 3 2 1 32 32 H 1.09001 * 109.47351 * 300.00446 * 4 2 1 33 33 H 1.09005 * 109.46865 * 60.00215 * 4 2 1 34 34 H 1.08997 * 109.47257 * 180.02562 * 4 2 1 35 35 H 0.97004 * 119.99709 * 359.97438 * 8 6 5 36 36 H 1.08993 * 113.61229 * 334.57051 * 11 9 8 37 37 H 1.09000 * 113.61263 * 203.66701 * 11 9 8 38 38 H 1.08996 * 109.47544 * 207.50317 * 14 12 11 39 39 H 1.09007 * 109.47088 * 327.50753 * 14 12 11 40 40 H 0.97004 * 120.00029 * 0.02562 * 15 14 12 41 41 H 1.08008 * 119.56784 * 179.97438 * 18 17 16 42 42 H 1.09003 * 109.47288 * 239.99750 * 20 19 18 43 43 H 0.96703 * 113.99607 * 300.00075 * 21 20 19 44 44 H 1.48494 * 110.00024 * 180.02562 * 22 20 19 45 45 H 1.48505 * 109.99697 * 301.32008 * 22 20 19 46 46 H 1.07996 * 120.74790 * 179.97438 * 23 19 18 47 47 H 1.07995 * 120.45279 * 180.28476 * 24 23 19 48 48 H 1.08998 * 113.61879 * 156.33410 * 25 9 8 49 49 H 1.08999 * 113.61887 * 25.42517 * 25 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0401 1.4424 0.0000 4 6 2.0400 -0.7213 -1.2493 5 8 2.0140 -0.6846 1.1855 6 6 1.6522 -1.9724 1.3382 7 8 0.9514 -2.5097 0.5035 8 7 2.0672 -2.6656 2.4170 9 6 1.6739 -4.0670 2.5830 10 1 0.7605 -4.3180 2.0438 11 6 2.8225 -5.0615 2.3454 12 6 3.1492 -4.9205 3.8415 13 9 4.0424 -3.8817 4.1246 14 6 3.5389 -6.2400 4.5107 15 7 4.9800 -6.4566 4.3609 16 6 5.5701 -7.5979 4.8914 17 7 6.8732 -7.7875 4.7529 18 6 7.4723 -8.8573 5.2410 19 6 6.7555 -9.8235 5.9175 20 6 7.4519 -11.0402 6.4705 21 8 7.2724 -11.0891 7.8873 22 14 9.2706 -10.9473 6.0772 23 6 5.3862 -9.6625 6.0845 24 6 4.7871 -8.5283 5.5675 25 6 1.6740 -4.5376 4.0470 26 1 -0.3633 0.5138 0.8900 27 1 -0.3633 0.5139 -0.8900 28 1 -0.3634 -1.0277 -0.0005 29 1 3.1300 1.4423 0.0005 30 1 1.6768 1.9563 -0.8900 31 1 1.6768 1.9563 0.8900 32 1 1.6766 -1.7489 -1.2494 33 1 1.6766 -0.2074 -2.1393 34 1 3.1300 -0.7217 -1.2491 35 1 2.6268 -2.2367 3.0832 36 1 3.6040 -4.6773 1.6898 37 1 2.4852 -6.0591 2.0642 38 1 3.2859 -6.1987 5.5701 39 1 2.9973 -7.0602 4.0395 40 1 5.5224 -5.8036 3.8914 41 1 8.5374 -8.9788 5.1085 42 1 7.0284 -11.9376 6.0194 43 1 7.6263 -10.3204 8.3554 44 1 9.9685 -12.1418 6.6167 45 1 9.4689 -10.8642 4.6078 46 1 4.8031 -10.4044 6.6097 47 1 3.7252 -8.3691 5.6832 48 1 1.0228 -5.3920 4.2311 49 1 1.5284 -3.7307 4.7651 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_15774726_13915762.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 08:51:38 Heat of formation + Delta-G solvation = -85.312228 kcal Electronic energy + Delta-G solvation = -31337.869186 eV Core-core repulsion = 26796.376493 eV Total energy + Delta-G solvation = -4541.492693 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 354.179 amu Computer time = 1.07 seconds Orbital eigenvalues (eV) -49.06003 -41.81423 -41.39637 -40.11024 -38.22562 -37.76988 -36.59809 -35.24768 -34.02630 -33.41710 -31.76152 -28.98611 -28.33791 -28.30290 -27.35723 -26.11500 -25.00912 -24.37613 -23.10414 -22.39110 -21.13322 -20.84684 -19.33694 -18.88701 -18.55796 -17.78504 -17.61421 -17.21354 -17.16042 -16.71453 -16.55135 -16.48424 -16.31223 -16.04262 -15.61060 -15.50985 -15.41255 -15.29620 -14.95499 -14.58468 -14.43538 -14.28091 -14.05322 -14.01126 -13.90530 -13.41840 -13.37011 -13.27650 -13.22943 -12.94979 -12.86220 -12.84099 -12.41326 -12.37931 -12.26923 -12.00156 -11.80787 -11.59756 -11.31960 -11.26564 -11.01487 -10.75284 -10.40972 -10.40053 -10.30831 -8.78238 -5.03382 0.21971 0.40027 1.08874 1.30720 1.62702 1.79599 1.89386 1.98145 2.76088 2.80081 2.87032 2.97116 3.03216 3.34438 3.44681 3.47136 3.57937 3.75730 3.76148 3.81947 3.95795 3.96481 4.04176 4.05918 4.13600 4.25536 4.26681 4.30287 4.38526 4.51212 4.51491 4.55693 4.62046 4.63891 4.68748 4.71006 4.75849 4.77245 4.88191 4.91728 4.97224 5.07824 5.23338 5.25488 5.34819 5.43065 5.44361 5.57364 5.89245 6.34310 6.43137 6.58125 7.11924 7.36827 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.136 3.864 3 C -0.142 4.142 4 C -0.184 4.184 5 O -0.363 6.363 6 C 0.655 3.345 7 O -0.564 6.564 8 N -0.696 5.696 9 C 0.140 3.860 10 H 0.120 0.880 11 C -0.168 4.168 12 C 0.081 3.919 13 F -0.181 7.181 14 C 0.121 3.879 15 N -0.722 5.722 16 C 0.408 3.592 17 N -0.537 5.537 18 C 0.157 3.843 19 C -0.235 4.235 20 C -0.052 4.052 21 O -0.543 6.543 22 Si 0.682 3.318 23 C -0.004 4.004 24 C -0.239 4.239 25 C -0.156 4.156 26 H 0.060 0.940 27 H 0.072 0.928 28 H 0.087 0.913 29 H 0.067 0.933 30 H 0.083 0.917 31 H 0.067 0.933 32 H 0.087 0.913 33 H 0.072 0.928 34 H 0.060 0.940 35 H 0.410 0.590 36 H 0.089 0.911 37 H 0.116 0.884 38 H 0.078 0.922 39 H 0.087 0.913 40 H 0.410 0.590 41 H 0.155 0.845 42 H 0.112 0.888 43 H 0.379 0.621 44 H -0.253 1.253 45 H -0.256 1.256 46 H 0.137 0.863 47 H 0.133 0.867 48 H 0.123 0.877 49 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.771 1.700 1.838 3.066 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.241 4.241 2 C 0.100 3.900 3 C -0.199 4.199 4 C -0.241 4.241 5 O -0.277 6.277 6 C 0.408 3.592 7 O -0.453 6.453 8 N -0.355 5.355 9 C 0.035 3.965 10 H 0.138 0.862 11 C -0.207 4.207 12 C 0.062 3.938 13 F -0.161 7.161 14 C -0.004 4.004 15 N -0.355 5.355 16 C 0.173 3.827 17 N -0.254 5.254 18 C -0.001 4.001 19 C -0.240 4.240 20 C -0.164 4.164 21 O -0.348 6.348 22 Si 0.584 3.416 23 C -0.030 4.030 24 C -0.264 4.264 25 C -0.195 4.195 26 H 0.079 0.921 27 H 0.091 0.909 28 H 0.106 0.894 29 H 0.086 0.914 30 H 0.101 0.899 31 H 0.086 0.914 32 H 0.105 0.895 33 H 0.091 0.909 34 H 0.079 0.921 35 H 0.246 0.754 36 H 0.108 0.892 37 H 0.134 0.866 38 H 0.097 0.903 39 H 0.105 0.895 40 H 0.246 0.754 41 H 0.172 0.828 42 H 0.130 0.870 43 H 0.226 0.774 44 H -0.178 1.178 45 H -0.181 1.181 46 H 0.154 0.846 47 H 0.151 0.849 48 H 0.141 0.859 49 H 0.114 0.886 Dipole moment (debyes) X Y Z Total from point charges -1.438 1.261 0.388 1.951 hybrid contribution -0.514 -0.197 0.350 0.652 sum -1.951 1.065 0.738 2.342 Atomic orbital electron populations 1.22524 0.93786 1.05035 1.02773 1.22144 0.94478 0.91593 0.81788 1.21880 1.02390 0.92285 1.03372 1.22525 1.01649 1.03415 0.96547 1.86318 1.71376 1.23258 1.46798 1.18038 0.78512 0.80652 0.81966 1.90921 1.40924 1.70538 1.42938 1.44381 1.55560 1.11407 1.24159 1.21716 0.99044 0.78977 0.96735 0.86200 1.24226 0.99964 1.01877 0.94623 1.22183 0.89092 0.84935 0.97570 1.92877 1.69425 1.59323 1.94507 1.21845 0.81521 0.95486 1.01537 1.44250 1.07394 1.22203 1.61669 1.18329 0.88568 0.86602 0.89236 1.67129 1.09367 1.23944 1.24954 1.22229 0.98999 0.87645 0.91212 1.21008 0.95731 1.00133 1.07150 1.24778 1.10320 0.97158 0.84151 1.86491 1.84169 1.47518 1.16601 0.94838 0.76721 0.87595 0.82470 1.21186 0.93612 0.95352 0.92848 1.21436 1.01047 0.97015 1.06925 1.24003 0.94254 1.03763 0.97436 0.92082 0.90878 0.89442 0.91357 0.89875 0.91360 0.89450 0.90872 0.92096 0.75370 0.89205 0.86591 0.90349 0.89546 0.75364 0.82799 0.87047 0.77406 1.17782 1.18088 0.84560 0.84943 0.85888 0.88613 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.20 8.37 37.16 0.31 0.11 16 2 C 0.14 0.17 1.13 -90.62 -0.10 0.07 16 3 C -0.14 0.10 8.85 37.16 0.33 0.42 16 4 C -0.18 -0.23 8.37 37.16 0.31 0.08 16 5 O -0.36 -0.89 9.94 -40.32 -0.40 -1.29 16 6 C 0.65 1.67 8.06 54.06 0.44 2.10 16 7 O -0.56 -2.56 11.48 -19.28 -0.22 -2.78 16 8 N -0.70 0.14 5.19 -57.93 -0.30 -0.16 16 9 C 0.14 -0.29 4.32 -67.12 -0.29 -0.58 16 10 H 0.12 -0.17 7.47 -51.93 -0.39 -0.55 16 11 C -0.17 0.47 7.32 -25.92 -0.19 0.28 16 12 C 0.08 -0.25 1.73 -89.81 -0.16 -0.41 16 13 F -0.18 0.10 15.50 2.25 0.03 0.14 16 14 C 0.12 -0.40 4.64 -4.04 -0.02 -0.41 16 15 N -0.72 0.33 5.62 -60.42 -0.34 -0.01 16 16 C 0.41 0.55 7.65 -155.02 -1.19 -0.64 16 17 N -0.54 -1.45 10.39 -12.43 -0.13 -1.58 16 18 C 0.16 0.17 9.84 -17.57 -0.17 0.00 16 19 C -0.23 -0.08 5.40 -104.47 -0.56 -0.64 16 20 C -0.05 0.02 2.84 36.00 0.10 0.12 16 21 O -0.54 -0.01 12.78 -35.23 -0.45 -0.46 16 22 Si 0.68 -0.69 29.82 -169.99 -5.07 -5.76 16 23 C 0.00 0.00 9.76 -39.32 -0.38 -0.38 16 24 C -0.24 0.00 9.33 -39.22 -0.37 -0.36 16 25 C -0.16 0.69 7.28 -25.92 -0.19 0.50 16 26 H 0.06 0.05 8.14 -51.93 -0.42 -0.37 16 27 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 28 H 0.09 0.27 5.88 -51.93 -0.31 -0.04 16 29 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 30 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 31 H 0.07 -0.05 8.14 -51.93 -0.42 -0.48 16 32 H 0.09 0.28 5.88 -51.93 -0.31 -0.02 16 33 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 34 H 0.06 0.07 8.14 -51.93 -0.42 -0.35 16 35 H 0.41 -0.42 7.88 -40.82 -0.32 -0.74 16 36 H 0.09 -0.09 8.14 -51.93 -0.42 -0.52 16 37 H 0.12 -0.50 7.90 -51.93 -0.41 -0.91 16 38 H 0.08 -0.29 7.92 -51.93 -0.41 -0.71 16 39 H 0.09 -0.41 7.64 -51.93 -0.40 -0.80 16 40 H 0.41 0.07 8.15 -40.82 -0.33 -0.26 16 41 H 0.16 -0.13 4.88 -52.48 -0.26 -0.39 16 42 H 0.11 -0.01 7.96 -51.93 -0.41 -0.42 16 43 H 0.38 -1.38 8.70 45.56 0.40 -0.98 16 44 H -0.25 -0.55 7.11 56.52 0.40 -0.15 16 45 H -0.26 -0.35 7.11 56.52 0.40 0.06 16 46 H 0.14 -0.13 8.06 -52.49 -0.42 -0.55 16 47 H 0.13 -0.30 6.71 -52.49 -0.35 -0.65 16 48 H 0.12 -0.81 8.10 -51.93 -0.42 -1.23 16 49 H 0.10 -0.40 8.14 -51.93 -0.42 -0.82 16 LS Contribution 396.23 15.07 5.97 5.97 Total: 0.00 -8.12 396.23 -10.38 -18.50 By element: Atomic # 1 Polarization: -5.47 SS G_CDS: -7.34 Total: -12.81 kcal Atomic # 6 Polarization: 2.37 SS G_CDS: -2.13 Total: 0.24 kcal Atomic # 7 Polarization: -0.98 SS G_CDS: -0.77 Total: -1.74 kcal Atomic # 8 Polarization: -3.46 SS G_CDS: -1.07 Total: -4.53 kcal Atomic # 9 Polarization: 0.10 SS G_CDS: 0.03 Total: 0.14 kcal Atomic # 14 Polarization: -0.69 SS G_CDS: -5.07 Total: -5.76 kcal Total LS contribution 5.97 Total: 5.97 kcal Total: -8.12 -10.38 -18.50 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_15774726_13915762.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -66.814 kcal (2) G-P(sol) polarization free energy of solvation -8.123 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -74.936 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.376 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.499 kcal (6) G-S(sol) free energy of system = (1) + (5) -85.312 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.07 seconds