Wall clock time and date at job start Mon Mar 8 2021 08:51:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53005 * 1 3 3 C 1.53003 * 109.46959 * 2 1 4 4 C 1.52993 * 109.47123 * 239.99765 * 2 1 3 5 5 O 1.45203 * 109.46739 * 119.99925 * 2 1 3 6 6 C 1.34628 * 117.00428 * 60.00242 * 5 2 1 7 7 O 1.21512 * 120.00148 * 359.97438 * 6 5 2 8 8 N 1.34773 * 120.00304 * 180.02562 * 6 5 2 9 9 C 1.46499 * 120.00357 * 179.97438 * 8 6 5 10 10 H 1.09002 * 112.84946 * 336.19444 * 9 8 6 11 11 C 1.53958 * 113.61524 * 107.46312 * 9 8 6 12 12 C 1.53777 * 87.02059 * 89.19995 * 11 9 8 13 13 F 1.39900 * 113.61665 * 270.77245 * 12 11 9 14 14 C 1.53001 * 113.61397 * 139.94989 * 12 11 9 15 15 N 1.46501 * 109.47056 * 85.86610 * 14 12 11 16 16 C 1.38609 * 120.00319 * 180.02562 * 15 14 12 17 17 N 1.29689 * 124.94704 * 359.95720 * 16 15 14 18 18 C 1.32119 * 116.86486 * 180.02562 * 17 16 15 19 19 C 1.33320 * 114.58192 * 359.97438 * 18 17 16 20 20 C 1.50698 * 125.95578 * 180.02562 * 19 18 17 21 21 O 1.42898 * 109.47135 * 64.97381 * 20 19 18 22 22 Si 1.86290 * 109.47594 * 184.97512 * 20 19 18 23 23 S 1.70961 * 124.95151 * 180.02562 * 16 15 14 24 24 C 1.53777 * 113.61635 * 204.99806 * 9 8 6 25 25 H 1.09002 * 109.46785 * 300.00211 * 1 2 3 26 26 H 1.08998 * 109.46919 * 60.00031 * 1 2 3 27 27 H 1.08998 * 109.47154 * 180.02562 * 1 2 3 28 28 H 1.09002 * 109.46768 * 179.97438 * 3 2 1 29 29 H 1.08996 * 109.46564 * 299.99583 * 3 2 1 30 30 H 1.08994 * 109.47417 * 60.00012 * 3 2 1 31 31 H 1.08998 * 109.47056 * 299.99999 * 4 2 1 32 32 H 1.09003 * 109.47442 * 60.00051 * 4 2 1 33 33 H 1.09002 * 109.47200 * 180.02562 * 4 2 1 34 34 H 0.97004 * 119.99826 * 359.97438 * 8 6 5 35 35 H 1.09005 * 113.66560 * 334.67590 * 11 9 8 36 36 H 1.09000 * 113.61161 * 203.71995 * 11 9 8 37 37 H 1.08997 * 109.47418 * 325.86476 * 14 12 11 38 38 H 1.08997 * 109.47190 * 205.86380 * 14 12 11 39 39 H 0.97006 * 119.99700 * 0.02562 * 15 14 12 40 40 H 1.07998 * 122.70428 * 180.02562 * 18 17 16 41 41 H 1.09001 * 109.46694 * 304.97916 * 20 19 18 42 42 H 0.96702 * 114.00476 * 180.02562 * 21 20 19 43 43 H 1.48500 * 110.00210 * 300.00285 * 22 20 19 44 44 H 1.48509 * 110.00088 * 61.31804 * 22 20 19 45 45 H 1.09001 * 113.61981 * 156.25345 * 24 9 8 46 46 H 1.09004 * 113.69160 * 25.35579 * 24 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7213 -1.2492 5 8 2.0140 -0.6845 1.1856 6 6 1.6523 -1.9722 1.3384 7 8 0.9510 -2.5095 0.5041 8 7 2.0671 -2.6653 2.4173 9 6 1.6731 -4.0664 2.5839 10 1 0.7588 -4.3159 2.0454 11 6 2.8222 -5.0629 2.3451 12 6 3.1478 -4.9225 3.8414 13 9 4.0434 -3.8859 4.1253 14 6 3.5353 -6.2426 4.5108 15 7 4.9694 -6.4801 4.3284 16 6 5.5549 -7.6224 4.8514 17 7 4.9264 -8.5411 5.5170 18 6 5.6437 -9.5653 5.9437 19 6 6.9366 -9.5088 5.6234 20 6 7.9816 -10.5351 5.9777 21 8 7.6840 -11.7661 5.3157 22 14 9.6573 -9.9280 5.4357 23 16 7.2108 -8.0247 4.7147 24 6 1.6735 -4.5366 4.0480 25 1 -0.3633 0.5139 0.8900 26 1 -0.3633 0.5138 -0.8900 27 1 -0.3633 -1.0276 0.0005 28 1 3.1300 1.4425 0.0005 29 1 1.6767 1.9562 -0.8900 30 1 1.6767 1.9564 0.8899 31 1 1.6767 -1.7489 -1.2491 32 1 1.6767 -0.2075 -2.1392 33 1 3.1300 -0.7217 -1.2489 34 1 2.6267 -2.2364 3.0835 35 1 3.6048 -4.6795 1.6902 36 1 2.4840 -6.0600 2.0635 37 1 2.9715 -7.0585 4.0587 38 1 3.3083 -6.1904 5.5756 39 1 5.5092 -5.8378 3.8414 40 1 5.2168 -10.3827 6.5060 41 1 7.9840 -10.6939 7.0561 42 1 8.3167 -12.4742 5.4987 43 1 9.6672 -9.7076 3.9671 44 1 9.9924 -8.6647 6.1410 45 1 1.0207 -5.3897 4.2329 46 1 1.5299 -3.7300 4.7671 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_15774726_15704118.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 08:51:41 Heat of formation + Delta-G solvation = -75.361170 kcal Electronic energy + Delta-G solvation = -29832.060918 eV Core-core repulsion = 25380.151982 eV Total energy + Delta-G solvation = -4451.908936 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.135 amu Computer time = 1.05 seconds Orbital eigenvalues (eV) -49.07737 -41.81106 -40.73178 -40.05458 -38.08061 -37.75125 -36.64960 -35.24659 -33.97005 -31.68617 -29.34858 -28.34255 -28.30577 -27.35260 -26.39899 -25.00025 -24.02551 -23.09062 -21.16537 -20.94576 -20.61886 -19.84793 -19.21525 -18.48819 -17.75656 -17.62306 -17.32406 -17.13510 -17.02654 -16.51165 -16.43724 -16.00072 -15.64423 -15.51068 -15.39917 -15.32593 -15.29181 -14.71488 -14.50406 -14.43741 -14.23837 -14.00317 -13.91815 -13.42279 -13.26589 -13.22748 -12.95944 -12.86483 -12.84516 -12.82809 -12.45441 -12.39966 -12.27061 -12.07473 -11.80068 -11.60858 -11.32319 -11.25820 -11.01391 -10.67177 -10.33361 -10.30310 -10.17369 -8.80187 -5.22182 -0.06874 0.05766 0.64777 1.08958 1.22059 1.57330 1.80225 1.91833 1.97234 2.00662 2.77420 2.84264 2.98238 3.05723 3.35256 3.41826 3.45196 3.68274 3.75797 3.81570 3.95438 3.96782 4.15801 4.17666 4.30353 4.38542 4.39494 4.42469 4.54734 4.55658 4.61679 4.63633 4.71693 4.73272 4.76660 4.76808 4.87907 4.91391 5.02378 5.07485 5.24523 5.34652 5.43161 5.57164 5.69254 5.92214 6.34526 6.57775 6.94046 7.36932 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.136 3.864 3 C -0.142 4.142 4 C -0.184 4.184 5 O -0.363 6.363 6 C 0.654 3.346 7 O -0.564 6.564 8 N -0.696 5.696 9 C 0.141 3.859 10 H 0.121 0.879 11 C -0.168 4.168 12 C 0.077 3.923 13 F -0.184 7.184 14 C 0.130 3.870 15 N -0.691 5.691 16 C 0.329 3.671 17 N -0.547 5.547 18 C 0.123 3.877 19 C -0.260 4.260 20 C -0.017 4.017 21 O -0.545 6.545 22 Si 0.668 3.332 23 S 0.075 5.925 24 C -0.154 4.154 25 H 0.060 0.940 26 H 0.072 0.928 27 H 0.087 0.913 28 H 0.067 0.933 29 H 0.083 0.917 30 H 0.067 0.933 31 H 0.087 0.913 32 H 0.072 0.928 33 H 0.060 0.940 34 H 0.410 0.590 35 H 0.089 0.911 36 H 0.117 0.883 37 H 0.092 0.908 38 H 0.082 0.918 39 H 0.418 0.582 40 H 0.179 0.821 41 H 0.083 0.917 42 H 0.383 0.617 43 H -0.238 1.238 44 H -0.243 1.243 45 H 0.124 0.876 46 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.994 -0.804 1.881 2.857 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.241 4.241 2 C 0.100 3.900 3 C -0.199 4.199 4 C -0.241 4.241 5 O -0.278 6.278 6 C 0.408 3.592 7 O -0.453 6.453 8 N -0.355 5.355 9 C 0.036 3.964 10 H 0.139 0.861 11 C -0.207 4.207 12 C 0.058 3.942 13 F -0.164 7.164 14 C 0.003 3.997 15 N -0.332 5.332 16 C -0.042 4.042 17 N -0.272 5.272 18 C -0.028 4.028 19 C -0.382 4.382 20 C -0.131 4.131 21 O -0.352 6.352 22 Si 0.567 3.433 23 S 0.324 5.676 24 C -0.193 4.193 25 H 0.079 0.921 26 H 0.091 0.909 27 H 0.106 0.894 28 H 0.086 0.914 29 H 0.101 0.899 30 H 0.086 0.914 31 H 0.106 0.894 32 H 0.091 0.909 33 H 0.079 0.921 34 H 0.246 0.754 35 H 0.107 0.893 36 H 0.135 0.865 37 H 0.110 0.890 38 H 0.100 0.900 39 H 0.255 0.745 40 H 0.196 0.804 41 H 0.101 0.899 42 H 0.231 0.769 43 H -0.162 1.162 44 H -0.167 1.167 45 H 0.142 0.858 46 H 0.114 0.886 Dipole moment (debyes) X Y Z Total from point charges 1.715 0.634 0.456 1.885 hybrid contribution -0.300 -0.017 0.748 0.807 sum 1.415 0.617 1.204 1.958 Atomic orbital electron populations 1.22526 0.93768 1.05058 1.02776 1.22144 0.94498 0.91580 0.81777 1.21882 1.02362 0.92300 1.03381 1.22522 1.01617 1.03436 0.96559 1.86314 1.71409 1.23271 1.46802 1.18034 0.78534 0.80643 0.81981 1.90922 1.40846 1.70528 1.42966 1.44387 1.55557 1.11449 1.24120 1.21762 0.99022 0.78891 0.96768 0.86148 1.24260 0.99985 1.01978 0.94467 1.22291 0.89271 0.85003 0.97639 1.92866 1.69326 1.59664 1.94530 1.21839 0.80911 0.94915 1.02021 1.43782 1.09041 1.20321 1.60020 1.23734 0.92920 0.91916 0.95585 1.66471 1.36851 1.04269 1.19646 1.21342 0.88507 0.95308 0.97602 1.24305 0.98842 1.01459 1.13632 1.23680 1.04303 0.86031 0.99092 1.86521 1.55268 1.20978 1.72440 0.95151 0.80607 0.85214 0.82290 1.84153 1.08008 1.19221 1.56251 1.23981 0.94168 1.03778 0.97331 0.92084 0.90866 0.89424 0.91383 0.89865 0.91360 0.89439 0.90858 0.92127 0.75412 0.89271 0.86481 0.89012 0.89953 0.74458 0.80375 0.89945 0.76902 1.16206 1.16665 0.85781 0.88606 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.24 8.37 37.16 0.31 0.07 16 2 C 0.14 0.20 1.13 -90.62 -0.10 0.09 16 3 C -0.14 0.08 8.85 37.16 0.33 0.40 16 4 C -0.18 -0.26 8.37 37.15 0.31 0.05 16 5 O -0.36 -0.97 9.94 -40.29 -0.40 -1.37 16 6 C 0.65 1.85 8.06 54.05 0.44 2.28 16 7 O -0.56 -2.71 11.48 -19.28 -0.22 -2.94 16 8 N -0.70 -0.10 5.19 -57.85 -0.30 -0.40 16 9 C 0.14 -0.21 4.33 -67.03 -0.29 -0.50 16 10 H 0.12 -0.09 7.46 -51.93 -0.39 -0.48 16 11 C -0.17 0.37 7.34 -25.83 -0.19 0.18 16 12 C 0.08 -0.17 1.71 -89.81 -0.15 -0.32 16 13 F -0.18 0.06 15.57 2.25 0.04 0.09 16 14 C 0.13 -0.17 5.68 -4.04 -0.02 -0.19 16 15 N -0.69 -0.23 5.61 -62.30 -0.35 -0.58 16 16 C 0.33 0.90 8.09 -87.68 -0.71 0.19 16 17 N -0.55 -2.11 10.14 -15.21 -0.15 -2.27 16 18 C 0.12 0.38 11.24 -19.15 -0.22 0.17 16 19 C -0.26 -0.72 5.76 -36.03 -0.21 -0.93 16 20 C -0.02 0.00 2.98 36.00 0.11 0.11 16 21 O -0.55 -0.10 12.86 -35.23 -0.45 -0.55 16 22 Si 0.67 -0.44 31.07 -169.99 -5.28 -5.72 16 23 S 0.08 0.21 20.59 -107.50 -2.21 -2.01 16 24 C -0.15 0.52 7.28 -25.92 -0.19 0.34 16 25 H 0.06 0.06 8.14 -51.93 -0.42 -0.36 16 26 H 0.07 0.00 8.14 -51.93 -0.42 -0.43 16 27 H 0.09 0.29 5.88 -51.93 -0.31 -0.02 16 28 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 29 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 30 H 0.07 -0.04 8.14 -51.93 -0.42 -0.47 16 31 H 0.09 0.30 5.88 -51.93 -0.31 -0.01 16 32 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 33 H 0.06 0.08 8.14 -51.93 -0.42 -0.35 16 34 H 0.41 -0.30 7.89 -40.82 -0.32 -0.62 16 35 H 0.09 -0.08 8.14 -51.93 -0.42 -0.51 16 36 H 0.12 -0.40 7.92 -51.93 -0.41 -0.81 16 37 H 0.09 -0.15 7.87 -51.93 -0.41 -0.56 16 38 H 0.08 -0.06 8.14 -51.93 -0.42 -0.48 16 39 H 0.42 -0.30 8.20 -40.82 -0.33 -0.64 16 40 H 0.18 0.21 8.06 -52.49 -0.42 -0.21 16 41 H 0.08 -0.16 7.96 -51.93 -0.41 -0.57 16 42 H 0.38 -1.92 8.74 45.56 0.40 -1.52 16 43 H -0.24 -0.61 7.11 56.52 0.40 -0.20 16 44 H -0.24 -0.43 7.11 56.52 0.40 -0.02 16 45 H 0.12 -0.64 8.10 -51.93 -0.42 -1.06 16 46 H 0.10 -0.31 8.14 -51.93 -0.42 -0.74 16 LS Contribution 391.23 15.07 5.90 5.90 Total: 0.00 -8.64 391.23 -10.79 -19.42 By element: Atomic # 1 Polarization: -4.75 SS G_CDS: -6.76 Total: -11.51 kcal Atomic # 6 Polarization: 2.51 SS G_CDS: -0.58 Total: 1.93 kcal Atomic # 7 Polarization: -2.44 SS G_CDS: -0.80 Total: -3.25 kcal Atomic # 8 Polarization: -3.78 SS G_CDS: -1.07 Total: -4.86 kcal Atomic # 9 Polarization: 0.06 SS G_CDS: 0.04 Total: 0.09 kcal Atomic # 14 Polarization: -0.44 SS G_CDS: -5.28 Total: -5.72 kcal Atomic # 16 Polarization: 0.21 SS G_CDS: -2.21 Total: -2.01 kcal Total LS contribution 5.90 Total: 5.90 kcal Total: -8.64 -10.79 -19.42 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_15774726_15704118.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -55.937 kcal (2) G-P(sol) polarization free energy of solvation -8.639 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -64.576 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.785 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.424 kcal (6) G-S(sol) free energy of system = (1) + (5) -75.361 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.06 seconds