Wall clock time and date at job start Mon Mar 8 2021 08:51:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.33329 * 125.94883 * 2 1 4 4 C 1.50704 * 122.70801 * 359.97204 * 3 2 1 5 5 O 1.42895 * 109.47380 * 44.54401 * 4 3 2 6 6 Si 1.86306 * 109.46583 * 164.54151 * 4 3 2 7 7 N 1.32120 * 114.57693 * 179.70222 * 3 2 1 8 8 C 1.29686 * 116.86704 * 0.27174 * 7 3 2 9 9 N 1.38613 * 124.94729 * 180.02562 * 8 7 3 10 10 C 1.46492 * 119.99984 * 179.97438 * 9 8 7 11 11 C 1.52998 * 109.47245 * 179.97438 * 10 9 8 12 12 F 1.39898 * 112.85151 * 50.33421 * 11 10 9 13 13 C 1.53783 * 113.61324 * 181.52908 * 11 10 9 14 14 C 1.53777 * 87.08202 * 139.98223 * 13 11 10 15 15 H 1.08997 * 113.61732 * 219.93727 * 14 13 11 16 16 N 1.46502 * 113.61755 * 89.11119 * 14 13 11 17 17 C 1.34776 * 120.00019 * 154.99843 * 16 14 13 18 18 O 1.21511 * 120.00309 * 0.02562 * 17 16 14 19 19 O 1.34639 * 119.99684 * 180.02562 * 17 16 14 20 20 C 1.45206 * 117.00043 * 180.02562 * 19 17 16 21 21 C 1.53009 * 109.46782 * 59.99415 * 20 19 17 22 22 C 1.52990 * 109.47487 * 179.97438 * 20 19 17 23 23 C 1.53000 * 109.46954 * 300.00239 * 20 19 17 24 24 C 1.53782 * 113.61444 * 279.13738 * 11 10 9 25 25 S 1.70966 * 110.10138 * 359.97438 * 8 7 3 26 26 H 1.08991 * 109.47481 * 84.23285 * 1 2 3 27 27 H 1.09006 * 109.46679 * 204.23395 * 1 2 3 28 28 H 1.09003 * 109.47170 * 324.22770 * 1 2 3 29 29 H 1.08999 * 109.46849 * 284.53801 * 4 3 2 30 30 H 0.96701 * 113.99884 * 180.02562 * 5 4 3 31 31 H 1.48503 * 109.99434 * 178.67930 * 6 4 3 32 32 H 1.48492 * 110.00142 * 299.99429 * 6 4 3 33 33 H 0.97001 * 119.99999 * 359.97438 * 9 8 7 34 34 H 1.09008 * 109.47390 * 300.00000 * 10 9 8 35 35 H 1.09004 * 109.47010 * 59.99412 * 10 9 8 36 36 H 1.08997 * 113.61308 * 254.53057 * 13 11 10 37 37 H 1.09002 * 113.61585 * 25.43270 * 13 11 10 38 38 H 0.97001 * 120.00065 * 335.01041 * 16 14 13 39 39 H 1.09005 * 109.46981 * 60.00465 * 21 20 19 40 40 H 1.08996 * 109.46834 * 179.97438 * 21 20 19 41 41 H 1.08995 * 109.47146 * 300.00422 * 21 20 19 42 42 H 1.09006 * 109.47201 * 59.99911 * 22 20 19 43 43 H 1.08996 * 109.47599 * 180.02562 * 22 20 19 44 44 H 1.09005 * 109.47171 * 300.00083 * 22 20 19 45 45 H 1.08995 * 109.47522 * 59.99243 * 23 20 19 46 46 H 1.08996 * 109.46789 * 180.02562 * 23 20 19 47 47 H 1.09006 * 109.46641 * 299.99419 * 23 20 19 48 48 H 1.09005 * 113.61418 * 334.56317 * 24 11 10 49 49 H 1.08998 * 113.61533 * 105.47101 * 24 11 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2898 1.0794 0.0000 4 6 1.7413 2.4830 -0.0006 5 8 0.6732 2.5776 0.9439 6 14 3.0920 3.6776 0.4678 7 7 3.5850 0.8189 0.0062 8 6 3.9315 -0.4309 0.0060 9 7 5.2385 -0.8925 0.0125 10 6 5.5067 -2.3326 0.0121 11 6 7.0181 -2.5700 0.0194 12 9 7.6775 -1.8425 1.0159 13 6 7.4083 -4.0570 -0.0181 14 6 8.5351 -3.6560 -0.9847 15 1 8.6839 -4.3643 -1.7997 16 7 9.7844 -3.2927 -0.3114 17 6 10.9591 -3.4092 -0.9619 18 8 10.9819 -3.8151 -2.1070 19 8 12.1073 -3.0758 -0.3428 20 6 13.3345 -3.2260 -1.1043 21 6 13.2703 -2.3454 -2.3540 22 6 14.5249 -2.8013 -0.2423 23 6 13.5011 -4.6891 -1.5196 24 6 7.6683 -2.4428 -1.3684 25 16 2.5413 -1.4260 -0.0020 26 1 -0.3634 0.1033 -1.0224 27 1 -0.3633 -0.9372 0.4219 28 1 -0.3634 0.8338 0.6007 29 1 1.3692 2.7272 -0.9956 30 1 0.2714 3.4556 0.9968 31 1 2.5721 5.0684 0.4398 32 1 3.6078 3.3554 1.8224 33 1 5.9755 -0.2619 0.0173 34 1 5.0632 -2.7851 0.8992 35 1 5.0727 -2.7827 -0.8808 36 1 7.7680 -4.4382 0.9376 37 1 6.6506 -4.6960 -0.4717 38 1 9.7663 -2.9685 0.6027 39 1 13.1515 -1.3030 -2.0582 40 1 14.1916 -2.4579 -2.9253 41 1 12.4221 -2.6477 -2.9682 42 1 14.5708 -3.4283 0.6482 43 1 15.4460 -2.9136 -0.8140 44 1 14.4060 -1.7588 0.0532 45 1 12.6529 -4.9914 -2.1338 46 1 14.4225 -4.8020 -2.0908 47 1 13.5468 -5.3165 -0.6293 48 1 6.9818 -2.6397 -2.1920 49 1 8.2375 -1.5228 -1.5013 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_15774726_15704122.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 08:51:46 Heat of formation + Delta-G solvation = -79.366980 kcal Electronic energy + Delta-G solvation = -32042.110733 eV Core-core repulsion = 27434.490472 eV Total energy + Delta-G solvation = -4607.620260 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.151 amu Computer time = 1.17 seconds Orbital eigenvalues (eV) -49.08574 -41.81361 -40.94249 -40.14234 -38.17791 -37.73411 -36.73132 -35.24909 -34.03013 -32.84697 -29.93439 -28.38642 -28.33186 -28.29992 -27.36476 -25.59034 -24.74462 -24.01136 -23.15581 -21.17849 -20.99008 -20.29697 -19.35397 -19.17766 -18.37244 -17.72773 -17.56541 -17.34061 -17.11559 -17.07827 -16.46898 -16.41277 -16.13932 -15.75333 -15.48031 -15.44586 -15.32867 -15.28297 -14.82753 -14.46943 -14.19967 -14.04433 -14.00753 -13.95271 -13.61420 -13.41832 -13.30916 -13.27766 -13.23600 -12.96410 -12.91294 -12.86268 -12.83940 -12.40658 -12.26776 -12.22032 -11.84037 -11.71400 -11.55947 -11.31699 -11.07854 -11.01333 -10.57785 -10.42308 -10.31730 -9.99361 -8.63382 -4.63896 0.05485 0.17876 0.78677 1.08643 1.44217 1.68728 1.80439 1.82539 1.94090 2.20794 2.73076 2.80575 2.91159 2.99867 3.15264 3.32374 3.41276 3.76405 3.82158 3.87863 3.95990 3.96361 4.04740 4.18602 4.21242 4.24749 4.37080 4.40213 4.42474 4.49465 4.55855 4.62152 4.62360 4.66640 4.75121 4.77595 4.79733 4.88427 4.92001 4.92634 5.08007 5.12993 5.23099 5.35114 5.36371 5.43123 5.47964 5.57359 6.21475 6.33960 6.46869 6.94271 7.36695 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.074 4.074 2 C -0.226 4.226 3 C 0.107 3.893 4 C -0.043 4.043 5 O -0.536 6.536 6 Si 0.720 3.280 7 N -0.537 5.537 8 C 0.320 3.680 9 N -0.693 5.693 10 C 0.115 3.885 11 C 0.083 3.917 12 F -0.180 7.180 13 C -0.155 4.155 14 C 0.141 3.859 15 H 0.121 0.879 16 N -0.696 5.696 17 C 0.655 3.345 18 O -0.564 6.564 19 O -0.363 6.363 20 C 0.137 3.863 21 C -0.184 4.184 22 C -0.142 4.142 23 C -0.184 4.184 24 C -0.167 4.167 25 S 0.101 5.899 26 H 0.068 0.932 27 H 0.062 0.938 28 H 0.098 0.902 29 H 0.082 0.918 30 H 0.383 0.617 31 H -0.268 1.268 32 H -0.263 1.263 33 H 0.416 0.584 34 H 0.081 0.919 35 H 0.091 0.909 36 H 0.096 0.904 37 H 0.124 0.876 38 H 0.410 0.590 39 H 0.060 0.940 40 H 0.072 0.928 41 H 0.087 0.913 42 H 0.067 0.933 43 H 0.082 0.918 44 H 0.067 0.933 45 H 0.087 0.913 46 H 0.072 0.928 47 H 0.060 0.940 48 H 0.117 0.883 49 H 0.091 0.909 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.020 -2.418 -1.780 3.003 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.134 4.134 2 C -0.349 4.349 3 C -0.023 4.023 4 C -0.155 4.155 5 O -0.343 6.343 6 Si 0.621 3.379 7 N -0.264 5.264 8 C -0.051 4.051 9 N -0.334 5.334 10 C -0.010 4.010 11 C 0.064 3.936 12 F -0.160 7.160 13 C -0.194 4.194 14 C 0.036 3.964 15 H 0.139 0.861 16 N -0.356 5.356 17 C 0.408 3.592 18 O -0.453 6.453 19 O -0.278 6.278 20 C 0.100 3.900 21 C -0.241 4.241 22 C -0.200 4.200 23 C -0.241 4.241 24 C -0.206 4.206 25 S 0.350 5.650 26 H 0.086 0.914 27 H 0.081 0.919 28 H 0.117 0.883 29 H 0.100 0.900 30 H 0.231 0.769 31 H -0.194 1.194 32 H -0.187 1.187 33 H 0.255 0.745 34 H 0.099 0.901 35 H 0.109 0.891 36 H 0.115 0.885 37 H 0.142 0.858 38 H 0.246 0.754 39 H 0.079 0.921 40 H 0.091 0.909 41 H 0.106 0.894 42 H 0.086 0.914 43 H 0.101 0.899 44 H 0.086 0.914 45 H 0.106 0.894 46 H 0.091 0.909 47 H 0.079 0.921 48 H 0.135 0.865 49 H 0.110 0.890 Dipole moment (debyes) X Y Z Total from point charges 0.832 -3.510 -1.671 3.975 hybrid contribution -0.919 1.523 0.881 1.985 sum -0.087 -1.987 -0.789 2.140 Atomic orbital electron populations 1.20295 0.86648 1.03635 1.02781 1.25089 1.01297 0.92511 1.15971 1.18730 0.86375 0.94967 1.02182 1.24065 0.97825 0.98251 0.95359 1.86478 1.49589 1.36232 1.62008 0.93628 0.83388 0.74183 0.86669 1.65548 1.16945 1.16635 1.27246 1.23087 0.91505 0.91363 0.99182 1.43610 1.02175 1.06578 1.81080 1.21966 0.94208 0.80874 1.03930 1.22131 0.90241 0.93204 0.88057 1.92895 1.81898 1.78735 1.62483 1.24000 0.98686 0.94373 1.02340 1.21755 0.81448 0.97160 0.96047 0.86096 1.44386 1.03005 1.70065 1.18102 1.18033 0.81243 0.76619 0.83258 1.90921 1.86735 1.50654 1.16952 1.86320 1.14546 1.80563 1.46344 1.22143 0.80005 0.96559 0.91275 1.22526 1.04646 0.99475 0.97489 1.21883 0.95182 1.02678 1.00208 1.22524 1.04442 0.94439 1.02716 1.24250 0.99550 1.01113 0.95701 1.83898 0.96493 1.10655 1.73973 0.91368 0.91917 0.88342 0.90028 0.76876 1.19415 1.18691 0.74483 0.90064 0.89088 0.88505 0.85786 0.75368 0.92088 0.90878 0.89425 0.91367 0.89876 0.91356 0.89421 0.90877 0.92100 0.86458 0.89018 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.07 -0.07 9.97 36.01 0.36 0.29 16 2 C -0.23 -0.60 6.49 -36.02 -0.23 -0.83 16 3 C 0.11 0.36 6.03 -84.18 -0.51 -0.14 16 4 C -0.04 -0.06 2.73 36.01 0.10 0.03 16 5 O -0.54 -0.66 10.21 -35.23 -0.36 -1.02 16 6 Si 0.72 1.26 31.87 -169.99 -5.42 -4.16 16 7 N -0.54 -1.93 8.60 -11.36 -0.10 -2.02 16 8 C 0.32 0.59 8.24 -87.68 -0.72 -0.13 16 9 N -0.69 0.39 5.63 -62.30 -0.35 0.04 16 10 C 0.12 -0.37 5.20 -4.05 -0.02 -0.39 16 11 C 0.08 -0.27 1.63 -89.81 -0.15 -0.42 16 12 F -0.18 0.14 15.78 2.25 0.04 0.18 16 13 C -0.16 0.72 7.28 -25.92 -0.19 0.53 16 14 C 0.14 -0.34 4.33 -67.02 -0.29 -0.63 16 15 H 0.12 -0.21 7.46 -51.93 -0.39 -0.60 16 16 N -0.70 0.33 5.19 -57.84 -0.30 0.03 16 17 C 0.65 1.51 8.06 54.06 0.44 1.95 16 18 O -0.56 -2.40 11.48 -19.28 -0.22 -2.62 16 19 O -0.36 -0.84 9.94 -40.32 -0.40 -1.24 16 20 C 0.14 0.15 1.13 -90.62 -0.10 0.05 16 21 C -0.18 -0.20 8.37 37.16 0.31 0.11 16 22 C -0.14 0.11 8.85 37.15 0.33 0.43 16 23 C -0.18 -0.18 8.37 37.16 0.31 0.13 16 24 C -0.17 0.54 7.34 -25.82 -0.19 0.35 16 25 S 0.10 0.09 22.32 -107.50 -2.40 -2.31 16 26 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 27 H 0.06 0.02 8.14 -51.93 -0.42 -0.41 16 28 H 0.10 0.14 5.69 -51.93 -0.30 -0.15 16 29 H 0.08 -0.04 7.96 -51.93 -0.41 -0.45 16 30 H 0.38 -1.11 8.74 45.56 0.40 -0.71 16 31 H -0.27 -0.71 7.11 56.52 0.40 -0.31 16 32 H -0.26 -1.57 7.11 56.52 0.40 -1.17 16 33 H 0.42 -0.21 8.36 -40.82 -0.34 -0.55 16 34 H 0.08 -0.27 8.14 -51.92 -0.42 -0.69 16 35 H 0.09 -0.44 7.98 -51.93 -0.41 -0.85 16 36 H 0.10 -0.42 8.14 -51.93 -0.42 -0.84 16 37 H 0.12 -0.84 8.10 -51.93 -0.42 -1.26 16 38 H 0.41 -0.52 7.89 -40.82 -0.32 -0.84 16 39 H 0.06 0.06 8.14 -51.93 -0.42 -0.36 16 40 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 41 H 0.09 0.27 5.88 -51.93 -0.31 -0.04 16 42 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 43 H 0.08 -0.17 8.14 -51.93 -0.42 -0.60 16 44 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 45 H 0.09 0.25 5.88 -51.93 -0.31 -0.05 16 46 H 0.07 -0.02 8.14 -51.93 -0.42 -0.45 16 47 H 0.06 0.05 8.14 -51.93 -0.42 -0.38 16 48 H 0.12 -0.56 7.99 -51.93 -0.41 -0.97 16 49 H 0.09 -0.16 8.14 -51.93 -0.42 -0.58 16 LS Contribution 408.89 15.07 6.16 6.16 Total: 0.00 -8.30 408.89 -11.40 -19.70 By element: Atomic # 1 Polarization: -6.58 SS G_CDS: -7.49 Total: -14.07 kcal Atomic # 6 Polarization: 1.89 SS G_CDS: -0.56 Total: 1.33 kcal Atomic # 7 Polarization: -1.21 SS G_CDS: -0.75 Total: -1.96 kcal Atomic # 8 Polarization: -3.90 SS G_CDS: -0.98 Total: -4.88 kcal Atomic # 9 Polarization: 0.14 SS G_CDS: 0.04 Total: 0.18 kcal Atomic # 14 Polarization: 1.26 SS G_CDS: -5.42 Total: -4.16 kcal Atomic # 16 Polarization: 0.09 SS G_CDS: -2.40 Total: -2.31 kcal Total LS contribution 6.16 Total: 6.16 kcal Total: -8.30 -11.40 -19.70 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_15774726_15704122.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -59.663 kcal (2) G-P(sol) polarization free energy of solvation -8.302 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -67.966 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.401 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.704 kcal (6) G-S(sol) free energy of system = (1) + (5) -79.367 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.17 seconds