Wall clock time and date at job start Mon Mar 8 2021 08:51:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 C 1.52997 * 109.47092 * 2 1 4 4 C 1.53002 * 109.47454 * 239.99992 * 2 1 3 5 5 O 1.45206 * 109.47129 * 119.99823 * 2 1 3 6 6 C 1.34636 * 117.00048 * 60.00363 * 5 2 1 7 7 O 1.21514 * 119.99573 * 359.97438 * 6 5 2 8 8 N 1.34774 * 120.00282 * 179.97438 * 6 5 2 9 9 C 1.46497 * 120.00206 * 179.97438 * 8 6 5 10 10 H 1.09004 * 112.84770 * 25.33791 * 9 8 6 11 11 C 1.53781 * 113.61469 * 156.53036 * 9 8 6 12 12 C 1.53777 * 87.08063 * 89.11741 * 11 9 8 13 13 F 1.39904 * 113.61444 * 270.88442 * 12 11 9 14 14 C 1.53008 * 113.61606 * 140.06545 * 12 11 9 15 15 N 1.46496 * 109.46977 * 179.97438 * 14 12 11 16 16 C 1.39141 * 119.99765 * 179.97438 * 15 14 12 17 17 N 1.32340 * 119.72048 * 0.02562 * 16 15 14 18 18 C 1.32004 * 121.65378 * 179.97438 * 17 16 15 19 19 C 1.37986 * 120.89867 * 359.97438 * 18 17 16 20 20 C 1.50702 * 120.32946 * 179.97438 * 19 18 17 21 21 O 1.42899 * 109.47095 * 120.00085 * 20 19 18 22 22 Si 1.86296 * 109.46826 * 0.02562 * 20 19 18 23 23 C 1.38913 * 119.34677 * 0.02562 * 19 18 17 24 24 C 1.38448 * 118.48191 * 359.74566 * 23 19 18 25 25 F 1.35098 * 120.47058 * 180.26411 * 24 23 19 26 26 C 1.53781 * 113.61422 * 254.14023 * 9 8 6 27 27 H 1.09004 * 109.47059 * 299.99666 * 1 2 3 28 28 H 1.08992 * 109.47060 * 60.00150 * 1 2 3 29 29 H 1.09004 * 109.46930 * 180.02562 * 1 2 3 30 30 H 1.09001 * 109.47375 * 179.97438 * 3 2 1 31 31 H 1.09002 * 109.47045 * 299.99867 * 3 2 1 32 32 H 1.09000 * 109.47140 * 59.99774 * 3 2 1 33 33 H 1.09004 * 109.47006 * 299.99897 * 4 2 1 34 34 H 1.09002 * 109.46838 * 59.99394 * 4 2 1 35 35 H 1.08992 * 109.47056 * 180.02562 * 4 2 1 36 36 H 0.97003 * 119.99726 * 0.02562 * 8 6 5 37 37 H 1.09000 * 113.61796 * 203.66689 * 11 9 8 38 38 H 1.09004 * 113.61270 * 334.57087 * 11 9 8 39 39 H 1.09000 * 109.46636 * 300.00077 * 14 12 11 40 40 H 1.08998 * 109.46472 * 60.00109 * 14 12 11 41 41 H 0.96997 * 120.00543 * 0.02562 * 15 14 12 42 42 H 1.07999 * 119.55647 * 180.02562 * 18 17 16 43 43 H 1.08997 * 109.46734 * 240.00273 * 20 19 18 44 44 H 0.96701 * 114.00312 * 300.00273 * 21 20 19 45 45 H 1.48506 * 110.00054 * 180.02562 * 22 20 19 46 46 H 1.48507 * 110.00105 * 301.31831 * 22 20 19 47 47 H 1.08000 * 120.75942 * 179.97438 * 23 19 18 48 48 H 1.08996 * 113.61753 * 25.43114 * 26 9 8 49 49 H 1.09007 * 113.61376 * 156.33851 * 26 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0401 -0.7212 -1.2492 5 8 2.0140 -0.6845 1.1856 6 6 1.6524 -1.9723 1.3384 7 8 0.9510 -2.5094 0.5040 8 7 2.0681 -2.6657 2.4167 9 6 1.6741 -4.0668 2.5832 10 1 1.4467 -4.5579 1.6370 11 6 2.6275 -4.8723 3.4816 12 6 1.7557 -4.4305 4.6688 13 9 2.1606 -3.2201 5.2417 14 6 1.5288 -5.5322 5.7061 15 7 0.6918 -5.0158 6.7918 16 6 0.3478 -5.8412 7.8579 17 7 0.7802 -7.0916 7.8856 18 6 0.4775 -7.9075 8.8782 19 6 -0.3065 -7.4821 9.9311 20 6 -0.6447 -8.4245 11.0574 21 8 -0.1501 -7.8928 12.2881 22 14 0.1421 -10.0825 10.7371 23 6 -0.7818 -6.1768 9.9421 24 6 -0.4442 -5.3424 8.8901 25 9 -0.8801 -4.0639 8.8627 26 6 0.5993 -4.2804 3.6621 27 1 -0.3633 0.5138 0.8900 28 1 -0.3633 0.5138 -0.8899 29 1 -0.3633 -1.0277 0.0005 30 1 3.1300 1.4425 0.0005 31 1 1.6767 1.9563 -0.8900 32 1 1.6766 1.9563 0.8900 33 1 1.6768 -1.7490 -1.2492 34 1 1.6767 -0.2074 -2.1392 35 1 3.1300 -0.7216 -1.2489 36 1 2.6277 -2.2368 3.0829 37 1 2.6002 -5.9459 3.2955 38 1 3.6412 -4.4725 3.5117 39 1 1.0305 -6.3788 5.2338 40 1 2.4887 -5.8545 6.1096 41 1 0.3768 -4.0987 6.7672 42 1 0.8491 -8.9214 8.8666 43 1 -1.7265 -8.5414 11.1207 44 1 0.8079 -7.7620 12.3034 45 1 -0.1844 -11.0213 11.8405 46 1 -0.3394 -10.6320 9.4442 47 1 -1.3974 -5.8200 10.7545 48 1 -0.0234 -3.4033 3.8378 49 1 0.0184 -5.1927 3.5252 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_15774726_17656566.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 08:51:50 Heat of formation + Delta-G solvation = -130.190865 kcal Electronic energy + Delta-G solvation = -34062.657296 eV Core-core repulsion = 29049.764544 eV Total energy + Delta-G solvation = -5012.892752 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 372.169 amu Computer time = 1.27 seconds Orbital eigenvalues (eV) -49.88652 -49.01086 -41.79516 -41.43156 -40.06962 -38.29646 -37.77319 -36.62723 -35.23815 -34.02273 -33.25374 -31.87207 -29.00305 -28.32959 -28.29465 -27.32423 -26.33431 -25.25262 -24.11564 -23.02139 -22.84059 -21.11961 -20.83585 -19.58291 -19.20373 -18.59805 -18.35974 -17.69821 -17.59194 -17.25742 -17.15361 -16.99773 -16.83921 -16.46166 -16.36707 -16.09948 -15.85669 -15.47166 -15.39855 -15.36856 -15.24122 -15.11103 -14.50965 -14.38516 -14.36910 -14.02634 -13.95652 -13.82895 -13.51688 -13.40586 -13.22087 -13.19523 -12.92619 -12.84840 -12.83234 -12.65062 -12.39305 -12.25696 -12.10598 -11.80299 -11.59321 -11.34860 -11.30339 -11.00008 -10.75518 -10.71335 -10.49524 -10.28416 -8.83465 -5.11934 -0.10745 0.08285 1.10770 1.19550 1.54439 1.77957 1.84315 1.90555 2.51773 2.80178 2.85738 2.99039 3.02801 3.08522 3.26274 3.37325 3.38575 3.52072 3.55189 3.77063 3.80377 3.82819 3.96236 3.96677 4.18340 4.20692 4.31694 4.38084 4.40881 4.42848 4.47588 4.56233 4.57860 4.62839 4.65936 4.66975 4.74589 4.77985 4.80406 4.89247 4.92538 4.93744 5.08652 5.25883 5.28585 5.35736 5.44530 5.58726 5.81552 6.06387 6.36398 6.49575 6.87486 7.38640 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.136 3.864 3 C -0.142 4.142 4 C -0.184 4.184 5 O -0.363 6.363 6 C 0.654 3.346 7 O -0.564 6.564 8 N -0.696 5.696 9 C 0.140 3.860 10 H 0.119 0.881 11 C -0.153 4.153 12 C 0.076 3.924 13 F -0.183 7.183 14 C 0.128 3.872 15 N -0.716 5.716 16 C 0.390 3.610 17 N -0.513 5.513 18 C 0.147 3.853 19 C -0.208 4.208 20 C -0.055 4.055 21 O -0.540 6.540 22 Si 0.687 3.313 23 C -0.037 4.037 24 C -0.017 4.017 25 F -0.133 7.133 26 C -0.168 4.168 27 H 0.060 0.940 28 H 0.072 0.928 29 H 0.087 0.913 30 H 0.067 0.933 31 H 0.082 0.918 32 H 0.067 0.933 33 H 0.087 0.913 34 H 0.072 0.928 35 H 0.060 0.940 36 H 0.410 0.590 37 H 0.124 0.876 38 H 0.095 0.905 39 H 0.090 0.910 40 H 0.082 0.918 41 H 0.416 0.584 42 H 0.164 0.836 43 H 0.116 0.884 44 H 0.380 0.620 45 H -0.251 1.251 46 H -0.254 1.254 47 H 0.150 0.850 48 H 0.088 0.912 49 H 0.116 0.884 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.362 -1.525 -0.513 3.727 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.241 4.241 2 C 0.100 3.900 3 C -0.199 4.199 4 C -0.241 4.241 5 O -0.278 6.278 6 C 0.408 3.592 7 O -0.453 6.453 8 N -0.355 5.355 9 C 0.035 3.965 10 H 0.137 0.863 11 C -0.192 4.192 12 C 0.057 3.943 13 F -0.164 7.164 14 C 0.004 3.996 15 N -0.350 5.350 16 C 0.152 3.848 17 N -0.230 5.230 18 C -0.010 4.010 19 C -0.214 4.214 20 C -0.167 4.167 21 O -0.346 6.346 22 Si 0.588 3.412 23 C -0.064 4.064 24 C -0.044 4.044 25 F -0.111 7.111 26 C -0.207 4.207 27 H 0.079 0.921 28 H 0.091 0.909 29 H 0.106 0.894 30 H 0.086 0.914 31 H 0.101 0.899 32 H 0.086 0.914 33 H 0.106 0.894 34 H 0.091 0.909 35 H 0.079 0.921 36 H 0.246 0.754 37 H 0.142 0.858 38 H 0.113 0.887 39 H 0.108 0.892 40 H 0.100 0.900 41 H 0.253 0.747 42 H 0.180 0.820 43 H 0.133 0.867 44 H 0.227 0.773 45 H -0.176 1.176 46 H -0.179 1.179 47 H 0.168 0.832 48 H 0.107 0.893 49 H 0.134 0.866 Dipole moment (debyes) X Y Z Total from point charges 2.882 -2.873 -1.805 4.452 hybrid contribution -0.999 1.722 0.967 2.213 sum 1.883 -1.152 -0.839 2.361 Atomic orbital electron populations 1.22523 0.93818 1.05037 1.02750 1.22142 0.94470 0.91593 0.81799 1.21881 1.02367 0.92305 1.03370 1.22523 1.01633 1.03425 0.96531 1.86318 1.71431 1.23252 1.46776 1.18037 0.78579 0.80709 0.81870 1.90920 1.40766 1.70394 1.43239 1.44387 1.55550 1.11598 1.23958 1.21727 0.94658 0.80105 0.99968 0.86312 1.23965 0.99820 1.02830 0.92602 1.22338 0.97835 0.81734 0.92380 1.92874 1.91439 1.46083 1.85969 1.21728 0.96310 0.95040 0.86567 1.44314 1.55897 1.14039 1.20736 1.18370 0.90538 0.88960 0.86940 1.67273 1.26040 1.01850 1.27808 1.22335 0.92529 0.98170 0.87934 1.20952 1.04424 0.96089 0.99909 1.24870 1.03354 1.04648 0.83827 1.86513 1.27880 1.86901 1.33264 0.94837 0.90662 0.75320 0.80378 1.21293 0.96585 0.92346 0.96154 1.17997 1.05911 0.81627 0.98821 1.91502 1.88266 1.34864 1.96512 1.24255 0.96979 1.05065 0.94389 0.92118 0.90880 0.89442 0.91357 0.89884 0.91375 0.89437 0.90884 0.92082 0.75397 0.85804 0.88652 0.89180 0.89998 0.74657 0.81960 0.86680 0.77265 1.17581 1.17852 0.83206 0.89336 0.86606 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.26 8.37 37.16 0.31 0.05 16 2 C 0.14 0.19 1.13 -90.62 -0.10 0.09 16 3 C -0.14 0.08 8.85 37.16 0.33 0.41 16 4 C -0.18 -0.23 8.37 37.16 0.31 0.08 16 5 O -0.36 -0.95 9.94 -40.31 -0.40 -1.35 16 6 C 0.65 1.81 8.06 54.05 0.44 2.25 16 7 O -0.56 -2.68 11.50 -19.28 -0.22 -2.90 16 8 N -0.70 -0.05 5.18 -57.93 -0.30 -0.35 16 9 C 0.14 -0.23 4.30 -67.12 -0.29 -0.52 16 10 H 0.12 -0.12 7.50 -51.93 -0.39 -0.50 16 11 C -0.15 0.58 7.28 -25.92 -0.19 0.39 16 12 C 0.08 -0.19 1.66 -89.66 -0.15 -0.33 16 13 F -0.18 0.04 15.74 2.25 0.04 0.07 16 14 C 0.13 -0.26 5.39 -4.04 -0.02 -0.28 16 15 N -0.72 0.15 5.62 -60.34 -0.34 -0.19 16 16 C 0.39 0.46 7.49 -154.86 -1.16 -0.70 16 17 N -0.51 -0.46 9.57 -12.37 -0.12 -0.57 16 18 C 0.15 -0.10 9.84 -17.57 -0.17 -0.27 16 19 C -0.21 0.14 5.40 -104.46 -0.56 -0.43 16 20 C -0.06 0.08 2.84 36.01 0.10 0.18 16 21 O -0.54 0.42 12.78 -35.23 -0.45 -0.03 16 22 Si 0.69 -1.61 29.82 -169.99 -5.07 -6.68 16 23 C -0.04 -0.02 9.75 -39.25 -0.38 -0.40 16 24 C -0.02 -0.03 7.35 -39.09 -0.29 -0.31 16 25 F -0.13 -0.32 16.65 2.25 0.04 -0.29 16 26 C -0.17 0.38 7.35 -25.77 -0.19 0.19 16 27 H 0.06 0.08 8.14 -51.93 -0.42 -0.35 16 28 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 29 H 0.09 0.30 5.88 -51.93 -0.31 -0.01 16 30 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 31 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 32 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 33 H 0.09 0.28 5.88 -51.93 -0.31 -0.02 16 34 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 35 H 0.06 0.06 8.14 -51.93 -0.42 -0.36 16 36 H 0.41 -0.32 7.92 -40.82 -0.32 -0.64 16 37 H 0.12 -0.71 8.10 -51.93 -0.42 -1.13 16 38 H 0.09 -0.35 8.14 -51.93 -0.42 -0.77 16 39 H 0.09 -0.25 7.95 -51.93 -0.41 -0.66 16 40 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 41 H 0.42 -0.10 7.66 -40.82 -0.31 -0.42 16 42 H 0.16 -0.49 4.88 -52.49 -0.26 -0.74 16 43 H 0.12 -0.12 7.96 -51.93 -0.41 -0.54 16 44 H 0.38 -1.73 8.70 45.56 0.40 -1.33 16 45 H -0.25 -0.27 7.11 56.52 0.40 0.13 16 46 H -0.25 0.06 7.11 56.52 0.40 0.46 16 47 H 0.15 -0.04 8.06 -52.49 -0.42 -0.47 16 48 H 0.09 -0.07 8.14 -51.93 -0.42 -0.49 16 49 H 0.12 -0.41 7.97 -51.93 -0.41 -0.83 16 LS Contribution 404.29 15.07 6.09 6.09 Total: 0.00 -7.64 404.29 -9.75 -17.40 By element: Atomic # 1 Polarization: -4.59 SS G_CDS: -7.00 Total: -11.59 kcal Atomic # 6 Polarization: 2.41 SS G_CDS: -2.02 Total: 0.39 kcal Atomic # 7 Polarization: -0.36 SS G_CDS: -0.76 Total: -1.11 kcal Atomic # 8 Polarization: -3.22 SS G_CDS: -1.07 Total: -4.29 kcal Atomic # 9 Polarization: -0.29 SS G_CDS: 0.07 Total: -0.21 kcal Atomic # 14 Polarization: -1.61 SS G_CDS: -5.07 Total: -6.68 kcal Total LS contribution 6.09 Total: 6.09 kcal Total: -7.64 -9.75 -17.40 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_15774726_17656566.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -112.794 kcal (2) G-P(sol) polarization free energy of solvation -7.643 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -120.437 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.754 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.397 kcal (6) G-S(sol) free energy of system = (1) + (5) -130.191 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.27 seconds