Wall clock time and date at job start Mon Mar 8 2021 10:28:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86302 * 109.47005 * 2 1 4 4 C 1.50706 * 109.47186 * 119.99534 * 2 1 3 5 5 C 1.38603 * 120.72340 * 244.72413 * 4 2 1 6 6 N 1.32276 * 119.19531 * 179.78760 * 5 4 2 7 7 C 1.32490 * 120.74269 * 0.47673 * 6 5 4 8 8 N 1.38404 * 119.22125 * 179.75151 * 7 6 5 9 9 C 1.46498 * 119.99495 * 0.02562 * 8 7 6 10 10 H 1.08999 * 112.85795 * 23.79948 * 9 8 7 11 11 C 1.53789 * 113.61358 * 154.99822 * 9 8 7 12 12 C 1.53782 * 87.07783 * 89.11470 * 11 9 8 13 13 H 1.09005 * 113.61369 * 270.87937 * 12 11 9 14 14 C 1.52998 * 113.61338 * 139.98360 * 12 11 9 15 15 F 1.39904 * 109.47603 * 64.99431 * 14 12 11 16 16 C 1.53774 * 87.08659 * 25.43394 * 12 11 9 17 17 N 1.32494 * 121.56569 * 359.76997 * 7 6 5 18 18 C 1.32279 * 120.73962 * 359.97438 * 17 7 6 19 19 H 0.96699 * 114.00071 * 60.00216 * 1 2 3 20 20 H 1.08992 * 109.47403 * 239.99786 * 2 1 3 21 21 H 1.48503 * 110.00170 * 60.00086 * 3 2 1 22 22 H 1.48497 * 109.99882 * 181.31739 * 3 2 1 23 23 H 1.07998 * 120.39896 * 359.97438 * 5 4 2 24 24 H 0.96996 * 120.00552 * 180.02562 * 8 7 6 25 25 H 1.09000 * 113.61334 * 203.65670 * 11 9 8 26 26 H 1.08997 * 113.61399 * 334.48213 * 11 9 8 27 27 H 1.08998 * 109.47673 * 184.99569 * 14 12 11 28 28 H 1.08999 * 109.47353 * 304.99805 * 14 12 11 29 29 H 1.08998 * 113.61428 * 220.02283 * 16 12 11 30 30 H 1.08998 * 113.61855 * 89.11302 * 16 12 11 31 31 H 1.08007 * 120.40236 * 179.97438 * 18 17 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7103 1.2306 5 6 2.6471 -0.0262 2.2005 6 7 3.0700 -0.6786 3.2706 7 6 2.8245 -1.9724 3.4160 8 7 3.2863 -2.6250 4.5458 9 6 4.0363 -1.8852 5.5638 10 1 3.8243 -0.8160 5.5523 11 6 3.9574 -2.5136 6.9652 12 6 5.1949 -3.3405 6.5780 13 1 4.9536 -4.2889 6.0979 14 6 6.2121 -3.4886 7.7112 15 9 5.6433 -4.2261 8.7552 16 6 5.5378 -2.2172 5.5854 17 7 2.1478 -2.6566 2.5053 18 6 1.6925 -2.0632 1.4142 19 1 -0.3933 0.4417 -0.7651 20 1 1.7924 -0.5138 -0.8899 21 1 1.5615 2.4679 1.2085 22 1 3.5346 1.7703 -0.0321 23 1 2.8543 1.0275 2.0854 24 1 3.1134 -3.5721 4.6637 25 1 4.1412 -1.8048 7.7726 26 1 3.0618 -3.1141 7.1247 27 1 7.0965 -4.0066 7.3403 28 1 6.4957 -2.5015 8.0763 29 1 5.9185 -2.5794 4.6305 30 1 6.1534 -1.4272 6.0156 31 1 1.1418 -2.6263 0.6751 There are 43 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 43 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_15781662_12175864.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 10:28:37 Heat of formation + Delta-G solvation = 6.424533 kcal Electronic energy + Delta-G solvation = -16721.100824 eV Core-core repulsion = 13726.864755 eV Total energy + Delta-G solvation = -2994.236069 eV No. of doubly occupied orbitals = 43 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 240.101 amu Computer time = 0.33 seconds Orbital eigenvalues (eV) -48.51479 -42.13981 -40.41052 -37.97171 -35.64409 -34.72347 -32.35058 -29.47762 -26.86561 -26.55605 -25.93530 -23.76183 -23.03938 -20.61948 -19.62026 -18.60296 -18.28700 -17.23408 -16.86284 -16.77447 -16.42394 -16.29785 -16.08153 -15.69438 -15.23226 -14.84048 -14.75354 -14.07737 -13.88272 -13.68594 -13.46946 -13.16168 -12.41595 -12.24007 -11.88571 -11.86500 -11.82111 -11.70069 -11.35694 -11.12032 -10.59354 -9.98840 -9.14300 -5.08359 0.02111 0.13500 1.18724 1.55508 1.71814 1.86271 2.74683 3.04483 3.24695 3.31615 3.34417 3.48124 3.55144 3.67344 3.71948 3.85846 3.93812 4.05075 4.08182 4.25901 4.43793 4.51504 4.56838 4.65314 4.69373 4.75536 4.89853 4.94094 5.05508 5.27565 5.75983 5.97140 6.36078 6.56170 7.25656 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.548 6.548 2 C -0.050 4.050 3 Si 0.680 3.320 4 C -0.247 4.247 5 C 0.194 3.806 6 N -0.560 5.560 7 C 0.570 3.430 8 N -0.677 5.677 9 C 0.136 3.864 10 H 0.110 0.890 11 C -0.139 4.139 12 C -0.148 4.148 13 H 0.100 0.900 14 C 0.071 3.929 15 F -0.217 7.217 16 C -0.143 4.143 17 N -0.567 5.567 18 C 0.227 3.773 19 H 0.384 0.616 20 H 0.076 0.924 21 H -0.249 1.249 22 H -0.253 1.253 23 H 0.158 0.842 24 H 0.416 0.584 25 H 0.101 0.899 26 H 0.078 0.922 27 H 0.075 0.925 28 H 0.077 0.923 29 H 0.075 0.925 30 H 0.097 0.903 31 H 0.173 0.827 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.645 2.586 -4.256 5.022 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.354 6.354 2 C -0.163 4.163 3 Si 0.581 3.419 4 C -0.255 4.255 5 C 0.027 3.973 6 N -0.282 5.282 7 C 0.213 3.787 8 N -0.313 5.313 9 C 0.029 3.971 10 H 0.128 0.872 11 C -0.177 4.177 12 C -0.167 4.167 13 H 0.118 0.882 14 C 0.016 3.984 15 F -0.198 7.198 16 C -0.182 4.182 17 N -0.288 5.288 18 C 0.059 3.941 19 H 0.232 0.768 20 H 0.094 0.906 21 H -0.173 1.173 22 H -0.177 1.177 23 H 0.175 0.825 24 H 0.254 0.746 25 H 0.119 0.881 26 H 0.097 0.903 27 H 0.093 0.907 28 H 0.095 0.905 29 H 0.094 0.906 30 H 0.115 0.885 31 H 0.190 0.810 Dipole moment (debyes) X Y Z Total from point charges 1.656 2.468 -2.248 3.726 hybrid contribution -0.317 -0.580 -0.546 0.857 sum 1.339 1.888 -2.794 3.628 Atomic orbital electron populations 1.86494 1.17253 1.81831 1.49836 1.24305 0.85640 1.09998 0.96330 0.95046 0.80933 0.78126 0.87745 1.20731 1.07754 0.97072 0.99974 1.22620 0.89066 0.98877 0.86753 1.67887 1.27295 1.08411 1.24609 1.19318 0.87014 0.85426 0.86912 1.43795 1.57992 1.11849 1.17669 1.21818 0.90998 0.97538 0.86717 0.87155 1.23365 0.98377 0.99523 0.96471 1.23261 0.96907 0.99531 0.96988 0.88223 1.21975 0.95689 0.96038 0.84702 1.92782 1.87104 1.79608 1.60293 1.23443 0.97184 0.98028 0.99557 1.67990 1.16504 1.39963 1.04372 1.22845 0.88833 0.90870 0.91581 0.76829 0.90586 1.17308 1.17714 0.82507 0.74628 0.88090 0.90290 0.90666 0.90523 0.90611 0.88471 0.80984 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.46 12.82 -35.23 -0.45 0.01 16 2 C -0.05 0.06 2.82 36.01 0.10 0.16 16 3 Si 0.68 -1.40 29.91 -169.99 -5.08 -6.48 16 4 C -0.25 -0.48 5.40 -104.35 -0.56 -1.04 16 5 C 0.19 0.58 9.92 -17.23 -0.17 0.41 16 6 N -0.56 -2.33 9.13 -13.93 -0.13 -2.45 16 7 C 0.57 2.20 8.42 -322.81 -2.72 -0.52 16 8 N -0.68 -0.98 5.41 -55.00 -0.30 -1.27 16 9 C 0.14 0.00 4.33 -67.11 -0.29 -0.29 16 10 H 0.11 0.12 7.37 -51.93 -0.38 -0.26 16 11 C -0.14 0.14 7.34 -25.91 -0.19 -0.05 16 12 C -0.15 0.19 3.98 -89.81 -0.36 -0.16 16 13 H 0.10 -0.12 8.14 -51.93 -0.42 -0.54 16 14 C 0.07 -0.07 7.33 37.16 0.27 0.20 16 15 F -0.22 -0.53 17.30 2.25 0.04 -0.49 16 16 C -0.14 0.18 7.43 -25.92 -0.19 -0.01 16 17 N -0.57 -2.25 10.46 -13.93 -0.15 -2.39 16 18 C 0.23 0.53 10.99 -17.22 -0.19 0.34 16 19 H 0.38 -2.25 8.74 45.56 0.40 -1.85 16 20 H 0.08 -0.23 7.96 -51.93 -0.41 -0.65 16 21 H -0.25 -0.27 7.07 56.52 0.40 0.13 16 22 H -0.25 -0.09 7.11 56.52 0.40 0.31 16 23 H 0.16 0.25 5.04 -52.49 -0.26 -0.02 16 24 H 0.42 0.14 8.82 -40.82 -0.36 -0.22 16 25 H 0.10 -0.17 8.10 -51.93 -0.42 -0.59 16 26 H 0.08 -0.04 8.14 -51.93 -0.42 -0.46 16 27 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 28 H 0.08 -0.19 8.05 -51.93 -0.42 -0.60 16 29 H 0.08 -0.02 8.14 -51.93 -0.42 -0.44 16 30 H 0.10 -0.23 8.03 -51.93 -0.42 -0.64 16 31 H 0.17 -0.03 8.06 -52.48 -0.42 -0.46 16 LS Contribution 269.92 15.07 4.07 4.07 Total: 0.00 -6.96 269.92 -9.89 -16.85 By element: Atomic # 1 Polarization: -3.28 SS G_CDS: -3.59 Total: -6.87 kcal Atomic # 6 Polarization: 3.33 SS G_CDS: -4.30 Total: -0.97 kcal Atomic # 7 Polarization: -5.55 SS G_CDS: -0.57 Total: -6.12 kcal Atomic # 8 Polarization: 0.46 SS G_CDS: -0.45 Total: 0.01 kcal Atomic # 9 Polarization: -0.53 SS G_CDS: 0.04 Total: -0.49 kcal Atomic # 14 Polarization: -1.40 SS G_CDS: -5.08 Total: -6.48 kcal Total LS contribution 4.07 Total: 4.07 kcal Total: -6.96 -9.89 -16.85 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_15781662_12175864.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 23.273 kcal (2) G-P(sol) polarization free energy of solvation -6.957 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 16.317 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.892 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.849 kcal (6) G-S(sol) free energy of system = (1) + (5) 6.425 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.33 seconds