Wall clock time and date at job start Mon Mar 8 2021 10:28:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86302 * 109.47005 * 2 1 4 4 C 1.50706 * 109.47186 * 119.99534 * 2 1 3 5 5 C 1.38603 * 120.72340 * 244.72413 * 4 2 1 6 6 N 1.32276 * 119.19531 * 179.78760 * 5 4 2 7 7 C 1.32490 * 120.74269 * 0.47673 * 6 5 4 8 8 N 1.38404 * 119.22125 * 179.75151 * 7 6 5 9 9 C 1.46498 * 119.99495 * 0.02562 * 8 7 6 10 10 H 1.08999 * 112.85795 * 23.79948 * 9 8 7 11 11 C 1.53789 * 113.61358 * 154.99822 * 9 8 7 12 12 C 1.53782 * 87.07783 * 89.11470 * 11 9 8 13 13 H 1.09005 * 113.61369 * 270.87937 * 12 11 9 14 14 C 1.52998 * 113.61338 * 139.98360 * 12 11 9 15 15 F 1.39904 * 109.47603 * 64.99431 * 14 12 11 16 16 C 1.53774 * 87.08659 * 25.43394 * 12 11 9 17 17 N 1.32494 * 121.56569 * 359.76997 * 7 6 5 18 18 C 1.32279 * 120.73962 * 359.97438 * 17 7 6 19 19 H 0.96699 * 114.00071 * 60.00216 * 1 2 3 20 20 H 1.08992 * 109.47403 * 239.99786 * 2 1 3 21 21 H 1.48503 * 110.00170 * 60.00086 * 3 2 1 22 22 H 1.48497 * 109.99882 * 181.31739 * 3 2 1 23 23 H 1.07998 * 120.39896 * 359.97438 * 5 4 2 24 24 H 0.96996 * 120.00552 * 180.02562 * 8 7 6 25 25 H 1.09000 * 113.61334 * 203.65670 * 11 9 8 26 26 H 1.08997 * 113.61399 * 334.48213 * 11 9 8 27 27 H 1.08998 * 109.47673 * 184.99569 * 14 12 11 28 28 H 1.08999 * 109.47353 * 304.99805 * 14 12 11 29 29 H 1.08998 * 113.61428 * 220.02283 * 16 12 11 30 30 H 1.08998 * 113.61855 * 89.11302 * 16 12 11 31 31 H 1.08007 * 120.40236 * 179.97438 * 18 17 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7103 1.2306 5 6 2.6471 -0.0262 2.2005 6 7 3.0700 -0.6786 3.2706 7 6 2.8245 -1.9724 3.4160 8 7 3.2863 -2.6250 4.5458 9 6 4.0363 -1.8852 5.5638 10 1 3.8243 -0.8160 5.5523 11 6 3.9574 -2.5136 6.9652 12 6 5.1949 -3.3405 6.5780 13 1 4.9536 -4.2889 6.0979 14 6 6.2121 -3.4886 7.7112 15 9 5.6433 -4.2261 8.7552 16 6 5.5378 -2.2172 5.5854 17 7 2.1478 -2.6566 2.5053 18 6 1.6925 -2.0632 1.4142 19 1 -0.3933 0.4417 -0.7651 20 1 1.7924 -0.5138 -0.8899 21 1 1.5615 2.4679 1.2085 22 1 3.5346 1.7703 -0.0321 23 1 2.8543 1.0275 2.0854 24 1 3.1134 -3.5721 4.6637 25 1 4.1412 -1.8048 7.7726 26 1 3.0618 -3.1141 7.1247 27 1 7.0965 -4.0066 7.3403 28 1 6.4957 -2.5015 8.0763 29 1 5.9185 -2.5794 4.6305 30 1 6.1534 -1.4272 6.0156 31 1 1.1418 -2.6263 0.6751 There are 43 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 43 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_27_15781662_12175864.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 10:28:36 Heat of formation + Delta-G solvation = 9.031752 kcal Electronic energy + Delta-G solvation = -16720.987766 eV Core-core repulsion = 13726.864755 eV Total energy + Delta-G solvation = -2994.123012 eV No. of doubly occupied orbitals = 43 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 240.101 amu Computer time = 0.39 seconds Orbital eigenvalues (eV) -48.57501 -42.29081 -40.40033 -37.88668 -35.70310 -34.91528 -32.41727 -29.44188 -26.80979 -26.57349 -26.09144 -23.75874 -23.10796 -20.60556 -19.75240 -18.63364 -18.25004 -17.21351 -16.87043 -16.79006 -16.45706 -16.32954 -16.20810 -15.79425 -15.19107 -14.88800 -14.82022 -14.10360 -13.87955 -13.68242 -13.41270 -13.17014 -12.43182 -12.28609 -12.06727 -11.89853 -11.80857 -11.67594 -11.35244 -11.11484 -10.59964 -10.05860 -9.24919 -4.95065 -0.15512 -0.03293 1.31141 1.62538 1.66521 1.96522 2.59107 2.90413 3.30551 3.35822 3.39889 3.44817 3.52120 3.63987 3.74117 3.86717 4.05527 4.08793 4.16245 4.34114 4.50801 4.53128 4.61313 4.66509 4.74447 4.76906 4.95474 4.98923 5.07234 5.25096 5.63372 5.86322 6.23996 6.96084 7.08892 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.566 6.566 2 C -0.054 4.054 3 Si 0.771 3.229 4 C -0.252 4.252 5 C 0.176 3.824 6 N -0.578 5.578 7 C 0.553 3.447 8 N -0.673 5.673 9 C 0.130 3.870 10 H 0.098 0.902 11 C -0.134 4.134 12 C -0.141 4.141 13 H 0.097 0.903 14 C 0.065 3.935 15 F -0.237 7.237 16 C -0.133 4.133 17 N -0.584 5.584 18 C 0.219 3.781 19 H 0.406 0.594 20 H 0.103 0.897 21 H -0.296 1.296 22 H -0.286 1.286 23 H 0.163 0.837 24 H 0.419 0.581 25 H 0.110 0.890 26 H 0.073 0.927 27 H 0.087 0.913 28 H 0.093 0.907 29 H 0.066 0.934 30 H 0.111 0.889 31 H 0.196 0.804 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.646 2.631 -5.049 5.730 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.376 6.376 2 C -0.166 4.166 3 Si 0.677 3.323 4 C -0.260 4.260 5 C 0.009 3.991 6 N -0.301 5.301 7 C 0.197 3.803 8 N -0.310 5.310 9 C 0.024 3.976 10 H 0.116 0.884 11 C -0.172 4.172 12 C -0.160 4.160 13 H 0.115 0.885 14 C 0.010 3.990 15 F -0.218 7.218 16 C -0.172 4.172 17 N -0.307 5.307 18 C 0.051 3.949 19 H 0.258 0.742 20 H 0.121 0.879 21 H -0.223 1.223 22 H -0.213 1.213 23 H 0.179 0.821 24 H 0.258 0.742 25 H 0.128 0.872 26 H 0.092 0.908 27 H 0.105 0.895 28 H 0.111 0.889 29 H 0.085 0.915 30 H 0.130 0.870 31 H 0.213 0.787 Dipole moment (debyes) X Y Z Total from point charges 1.642 2.507 -3.070 4.290 hybrid contribution -0.329 -0.554 -0.294 0.708 sum 1.313 1.952 -3.364 4.105 Atomic orbital electron populations 1.86440 1.17124 1.82428 1.51611 1.24425 0.85877 1.10424 0.95829 0.94126 0.77524 0.75597 0.85083 1.21084 1.07010 0.97171 1.00700 1.22888 0.89719 0.99332 0.87148 1.67872 1.28086 1.08749 1.25363 1.19580 0.87524 0.85615 0.87619 1.43878 1.57772 1.12012 1.17290 1.21895 0.91852 0.96865 0.87026 0.88382 1.23359 0.98360 0.99546 0.95964 1.23182 0.96676 0.99311 0.96853 0.88507 1.22189 0.95873 0.96804 0.84094 1.92740 1.87508 1.80248 1.61343 1.23394 0.96261 0.98340 0.99195 1.68028 1.17076 1.40477 1.05071 1.23317 0.88644 0.91379 0.91582 0.74245 0.87896 1.22342 1.21349 0.82056 0.74237 0.87197 0.90847 0.89484 0.88868 0.91505 0.87023 0.78713 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.57 1.64 12.82 -148.98 -1.91 -0.27 16 2 C -0.05 0.17 2.82 71.24 0.20 0.37 16 3 Si 0.77 -3.22 29.91 68.60 2.05 -1.17 16 4 C -0.25 -1.04 5.40 -19.69 -0.11 -1.15 16 5 C 0.18 1.28 9.92 84.71 0.84 2.12 16 6 N -0.58 -5.71 9.13 -197.99 -1.81 -7.52 16 7 C 0.55 5.02 8.42 261.49 2.20 7.22 16 8 N -0.67 -2.79 5.41 -327.91 -1.77 -4.56 16 9 C 0.13 0.13 4.33 45.52 0.20 0.32 16 10 H 0.10 0.35 7.37 -2.39 -0.02 0.33 16 11 C -0.13 0.22 7.34 31.12 0.23 0.45 16 12 C -0.14 0.36 3.98 -10.27 -0.04 0.32 16 13 H 0.10 -0.19 8.14 -2.38 -0.02 -0.21 16 14 C 0.06 -0.17 7.33 71.98 0.53 0.36 16 15 F -0.24 -1.17 17.30 44.97 0.78 -0.39 16 16 C -0.13 0.31 7.43 31.12 0.23 0.54 16 17 N -0.58 -5.16 10.46 -197.98 -2.07 -7.23 16 18 C 0.22 1.07 10.99 84.71 0.93 2.00 16 19 H 0.41 -5.47 8.74 -74.06 -0.65 -6.12 16 20 H 0.10 -0.85 7.96 -2.39 -0.02 -0.87 16 21 H -0.30 -1.04 7.07 99.48 0.70 -0.34 16 22 H -0.29 -0.38 7.11 99.48 0.71 0.33 16 23 H 0.16 0.78 5.04 -2.91 -0.01 0.76 16 24 H 0.42 0.81 8.82 -92.71 -0.82 -0.01 16 25 H 0.11 -0.37 8.10 -2.39 -0.02 -0.39 16 26 H 0.07 -0.02 8.14 -2.39 -0.02 -0.04 16 27 H 0.09 -0.42 8.14 -2.39 -0.02 -0.44 16 28 H 0.09 -0.55 8.05 -2.39 -0.02 -0.57 16 29 H 0.07 0.00 8.14 -2.39 -0.02 -0.02 16 30 H 0.11 -0.58 8.03 -2.39 -0.02 -0.60 16 31 H 0.20 -0.21 8.06 -2.91 -0.02 -0.23 16 Total: 0.00 -17.23 269.92 0.22 -17.01 By element: Atomic # 1 Polarization: -8.16 SS G_CDS: -0.26 Total: -8.42 kcal Atomic # 6 Polarization: 7.35 SS G_CDS: 5.21 Total: 12.56 kcal Atomic # 7 Polarization: -13.66 SS G_CDS: -5.65 Total: -19.31 kcal Atomic # 8 Polarization: 1.64 SS G_CDS: -1.91 Total: -0.27 kcal Atomic # 9 Polarization: -1.17 SS G_CDS: 0.78 Total: -0.39 kcal Atomic # 14 Polarization: -3.22 SS G_CDS: 2.05 Total: -1.17 kcal Total: -17.23 0.22 -17.01 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_15781662_12175864.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 26.043 kcal (2) G-P(sol) polarization free energy of solvation -17.226 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 8.817 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.215 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.011 kcal (6) G-S(sol) free energy of system = (1) + (5) 9.032 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.39 seconds