Wall clock time and date at job start Mon Mar 8 2021 10:28:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86295 * 109.47401 * 2 1 4 4 C 1.50700 * 109.46845 * 119.99635 * 2 1 3 5 5 C 1.33330 * 125.94911 * 65.00065 * 4 2 1 6 6 N 1.32124 * 114.58023 * 179.69557 * 5 4 2 7 7 C 1.29687 * 116.86524 * 0.26640 * 6 5 4 8 8 N 1.38608 * 124.95273 * 180.02562 * 7 6 5 9 9 C 1.46502 * 119.99645 * 0.02562 * 8 7 6 10 10 H 1.08994 * 112.84979 * 23.80738 * 9 8 7 11 11 C 1.53775 * 113.61266 * 155.00460 * 9 8 7 12 12 C 1.53780 * 87.08398 * 89.11339 * 11 9 8 13 13 H 1.08996 * 113.61867 * 270.88302 * 12 11 9 14 14 C 1.53001 * 113.61266 * 139.97834 * 12 11 9 15 15 F 1.39905 * 109.47185 * 65.00530 * 14 12 11 16 16 C 1.53779 * 87.08108 * 25.43488 * 12 11 9 17 17 S 1.70969 * 110.10172 * 0.02562 * 7 6 5 18 18 H 0.96703 * 113.99659 * 300.00613 * 1 2 3 19 19 H 1.08999 * 109.47425 * 239.99807 * 2 1 3 20 20 H 1.48507 * 109.99962 * 299.99806 * 3 2 1 21 21 H 1.48501 * 110.00228 * 61.31753 * 3 2 1 22 22 H 1.08002 * 122.71398 * 359.96801 * 5 4 2 23 23 H 0.97005 * 119.99929 * 180.02562 * 8 7 6 24 24 H 1.08996 * 113.61569 * 203.66412 * 11 9 8 25 25 H 1.09001 * 113.61541 * 334.56743 * 11 9 8 26 26 H 1.08998 * 109.47062 * 185.00086 * 14 12 11 27 27 H 1.08994 * 109.47455 * 305.00158 * 14 12 11 28 28 H 1.09002 * 113.61523 * 220.02015 * 16 12 11 29 29 H 1.08994 * 113.62052 * 89.11361 * 16 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7103 1.2305 5 6 1.7621 -2.0025 1.5123 6 7 2.3031 -2.3917 2.6531 7 6 2.9165 -1.4861 3.3499 8 7 3.5417 -1.7086 4.5668 9 6 3.5404 -3.0497 5.1564 10 1 3.4069 -3.8378 4.4154 11 6 4.7137 -3.3009 6.1182 12 6 3.8126 -2.7504 7.2361 13 1 3.8879 -1.6709 7.3660 14 6 3.9323 -3.5186 8.5539 15 9 5.2228 -3.3601 9.0705 16 6 2.6140 -3.1853 6.3765 17 16 2.8417 0.0225 2.5488 18 1 -0.3933 0.4418 0.7650 19 1 1.7924 -0.5138 -0.8899 20 1 1.5616 2.4678 -1.2086 21 1 1.5880 2.4586 1.2242 22 1 1.2299 -2.6776 0.8585 23 1 3.9801 -0.9764 5.0279 24 1 4.9625 -4.3553 6.2374 25 1 5.5858 -2.6795 5.9147 26 1 3.2052 -3.1313 9.2676 27 1 3.7394 -4.5766 8.3766 28 1 1.7910 -2.4707 6.3813 29 1 2.2888 -4.2082 6.5661 There are 41 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 41 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_15781662_15704118.mol2 29 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 10:28:42 Heat of formation + Delta-G solvation = -5.952459 kcal Electronic energy + Delta-G solvation = -15267.388185 eV Core-core repulsion = 12427.193567 eV Total energy + Delta-G solvation = -2840.194618 eV No. of doubly occupied orbitals = 41 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 245.063 amu Computer time = 0.29 seconds Orbital eigenvalues (eV) -48.54343 -41.07424 -40.08040 -37.96477 -35.32878 -31.34746 -29.57271 -26.89436 -26.55384 -24.90541 -23.70685 -21.53183 -20.17664 -19.66176 -18.15693 -17.37931 -17.12192 -16.79906 -16.55740 -16.48506 -16.14539 -15.85031 -15.48808 -15.03992 -14.77569 -13.95068 -13.83675 -13.70860 -13.47601 -12.89163 -12.40521 -12.37476 -12.03637 -11.87302 -11.75443 -11.36155 -11.07239 -10.89364 -10.26701 -10.21780 -8.78665 -5.05558 -0.05455 0.00128 0.67268 1.23915 1.54092 1.89548 2.00838 2.04671 3.20530 3.25481 3.33758 3.44248 3.64157 3.65978 3.90421 3.91710 4.03317 4.23557 4.47415 4.52697 4.54851 4.65686 4.66189 4.73378 4.86185 4.90139 4.98121 5.21453 5.82126 6.00226 6.34849 6.98295 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.526 6.526 2 C -0.017 4.017 3 Si 0.653 3.347 4 C -0.304 4.304 5 C 0.120 3.880 6 N -0.549 5.549 7 C 0.327 3.673 8 N -0.676 5.676 9 C 0.137 3.863 10 H 0.109 0.891 11 C -0.139 4.139 12 C -0.149 4.149 13 H 0.099 0.901 14 C 0.070 3.930 15 F -0.217 7.217 16 C -0.143 4.143 17 S 0.090 5.910 18 H 0.376 0.624 19 H 0.126 0.874 20 H -0.237 1.237 21 H -0.243 1.243 22 H 0.176 0.824 23 H 0.415 0.585 24 H 0.101 0.899 25 H 0.078 0.922 26 H 0.075 0.925 27 H 0.077 0.923 28 H 0.076 0.924 29 H 0.097 0.903 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.370 0.590 1.179 1.901 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.333 6.333 2 C -0.131 4.131 3 Si 0.553 3.447 4 C -0.427 4.427 5 C -0.031 4.031 6 N -0.274 5.274 7 C -0.043 4.043 8 N -0.315 5.315 9 C 0.029 3.971 10 H 0.127 0.873 11 C -0.177 4.177 12 C -0.167 4.167 13 H 0.117 0.883 14 C 0.015 3.985 15 F -0.198 7.198 16 C -0.183 4.183 17 S 0.339 5.661 18 H 0.224 0.776 19 H 0.143 0.857 20 H -0.161 1.161 21 H -0.167 1.167 22 H 0.193 0.807 23 H 0.252 0.748 24 H 0.119 0.881 25 H 0.097 0.903 26 H 0.093 0.907 27 H 0.095 0.905 28 H 0.095 0.905 29 H 0.115 0.885 Dipole moment (debyes) X Y Z Total from point charges 1.616 1.428 1.115 2.428 hybrid contribution -1.248 -0.463 0.343 1.374 sum 0.369 0.965 1.459 1.788 Atomic orbital electron populations 1.86621 1.17526 1.79914 1.49203 1.24079 0.83462 1.09859 0.95671 0.95157 0.91832 0.75183 0.82574 1.25530 1.15074 0.98281 1.03818 1.21348 0.96551 0.93157 0.92071 1.66483 1.18534 1.33637 1.08750 1.23698 0.95448 0.93256 0.91937 1.43703 1.58785 1.11284 1.17678 1.21853 0.96223 0.84401 0.94592 0.87291 1.23367 0.97109 1.02955 0.94292 1.23264 0.98383 1.01080 0.94013 0.88325 1.21978 0.80414 1.01307 0.94758 1.92783 1.41336 1.97225 1.88454 1.23448 0.96731 1.02900 0.95177 1.84059 1.55472 1.10903 1.15678 0.77582 0.85656 1.16072 1.16745 0.80662 0.74786 0.88091 0.90310 0.90676 0.90495 0.90549 0.88503 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.56 12.88 -35.23 -0.45 -1.02 15 2 C -0.02 0.00 2.99 36.01 0.11 0.11 15 3 Si 0.65 -0.46 31.07 -169.99 -5.28 -5.74 15 4 C -0.30 -0.17 5.73 -36.02 -0.21 -0.38 15 5 C 0.12 0.20 11.24 -19.14 -0.22 -0.02 15 6 N -0.55 -1.46 9.83 -15.21 -0.15 -1.60 15 7 C 0.33 0.33 8.09 -87.68 -0.71 -0.38 15 8 N -0.68 0.72 5.42 -54.99 -0.30 0.43 15 9 C 0.14 -0.19 4.44 -67.12 -0.30 -0.49 15 10 H 0.11 0.01 7.66 -51.93 -0.40 -0.39 15 11 C -0.14 0.32 7.34 -25.92 -0.19 0.13 15 12 C -0.15 0.37 3.99 -89.81 -0.36 0.01 15 13 H 0.10 -0.26 8.14 -51.93 -0.42 -0.68 15 14 C 0.07 -0.13 7.33 37.16 0.27 0.14 15 15 F -0.22 -0.36 17.30 2.25 0.04 -0.32 15 16 C -0.14 0.32 7.43 -25.92 -0.19 0.13 15 17 S 0.09 -0.01 20.59 -107.50 -2.21 -2.23 15 18 H 0.38 -0.58 8.70 45.56 0.40 -0.18 15 19 H 0.13 -0.15 7.96 -51.93 -0.41 -0.57 15 20 H -0.24 -0.47 7.11 56.52 0.40 -0.07 15 21 H -0.24 -0.28 7.11 56.52 0.40 0.13 15 22 H 0.18 0.08 8.06 -52.49 -0.42 -0.34 15 23 H 0.41 -1.22 8.83 -40.82 -0.36 -1.58 15 24 H 0.10 -0.26 8.10 -51.93 -0.42 -0.68 15 25 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 15 26 H 0.07 -0.21 8.14 -51.93 -0.42 -0.63 15 27 H 0.08 -0.23 8.05 -51.93 -0.42 -0.65 15 28 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 15 29 H 0.10 -0.29 8.03 -51.93 -0.42 -0.70 15 LS Contribution 267.83 15.07 4.04 4.04 Total: 0.00 -5.20 267.83 -9.45 -14.65 By element: Atomic # 1 Polarization: -4.12 SS G_CDS: -3.34 Total: -7.46 kcal Atomic # 6 Polarization: 1.05 SS G_CDS: -1.79 Total: -0.74 kcal Atomic # 7 Polarization: -0.73 SS G_CDS: -0.45 Total: -1.18 kcal Atomic # 8 Polarization: -0.56 SS G_CDS: -0.45 Total: -1.02 kcal Atomic # 9 Polarization: -0.36 SS G_CDS: 0.04 Total: -0.32 kcal Atomic # 14 Polarization: -0.46 SS G_CDS: -5.28 Total: -5.74 kcal Atomic # 16 Polarization: -0.01 SS G_CDS: -2.21 Total: -2.23 kcal Total LS contribution 4.04 Total: 4.04 kcal Total: -5.20 -9.45 -14.65 kcal The number of atoms in the molecule is 29 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_15781662_15704118.mol2 29 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 8.699 kcal (2) G-P(sol) polarization free energy of solvation -5.199 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 3.500 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.452 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.652 kcal (6) G-S(sol) free energy of system = (1) + (5) -5.952 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.29 seconds