Wall clock time and date at job start Mon Mar 8 2021 10:28:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50696 * 1 3 3 C 1.33324 * 125.95168 * 2 1 4 4 C 1.50697 * 122.71084 * 359.97438 * 3 2 1 5 5 O 1.42901 * 109.46980 * 329.99935 * 4 3 2 6 6 Si 1.86301 * 109.47380 * 210.00085 * 4 3 2 7 7 N 1.32122 * 114.57911 * 179.97438 * 3 2 1 8 8 C 1.29688 * 116.87042 * 0.02562 * 7 3 2 9 9 N 1.38605 * 124.95282 * 179.97438 * 8 7 3 10 10 C 1.46500 * 119.99950 * 180.02562 * 9 8 7 11 11 H 1.09002 * 112.85132 * 25.33163 * 10 9 8 12 12 C 1.53781 * 113.61711 * 156.52901 * 10 9 8 13 13 C 1.53785 * 87.08277 * 89.19510 * 12 10 9 14 14 H 1.08999 * 113.61409 * 270.80258 * 13 12 10 15 15 C 1.52995 * 113.61328 * 139.98018 * 13 12 10 16 16 F 1.39897 * 109.47440 * 180.02562 * 15 13 12 17 17 C 1.53776 * 87.07661 * 25.43397 * 13 12 10 18 18 S 1.70971 * 110.09523 * 0.24265 * 8 7 3 19 19 H 1.08998 * 109.46926 * 90.00400 * 1 2 3 20 20 H 1.09002 * 109.47249 * 210.00168 * 1 2 3 21 21 H 1.09004 * 109.47585 * 330.00212 * 1 2 3 22 22 H 1.08998 * 109.47420 * 90.00229 * 4 3 2 23 23 H 0.96699 * 113.99825 * 299.99682 * 5 4 3 24 24 H 1.48500 * 110.00150 * 58.67404 * 6 4 3 25 25 H 1.48493 * 110.00257 * 180.02562 * 6 4 3 26 26 H 0.96998 * 120.00198 * 359.97438 * 9 8 7 27 27 H 1.08993 * 113.62030 * 203.74957 * 12 10 9 28 28 H 1.09006 * 113.61033 * 334.65409 * 12 10 9 29 29 H 1.09005 * 109.47371 * 300.00431 * 15 13 12 30 30 H 1.09001 * 109.47028 * 60.00447 * 15 13 12 31 31 H 1.09003 * 113.61687 * 220.01420 * 17 13 12 32 32 H 1.09009 * 113.61565 * 89.11769 * 17 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2897 1.0793 0.0000 4 6 1.7414 2.4829 -0.0006 5 8 0.4815 2.5019 -0.6747 6 14 2.9325 3.6147 -0.8787 7 7 3.5850 0.8187 0.0005 8 6 3.9315 -0.4310 0.0005 9 7 5.2384 -0.8926 0.0005 10 6 5.5065 -2.3329 -0.0002 11 1 4.6915 -2.9150 -0.4304 12 6 6.8900 -2.7018 -0.5613 13 6 7.4248 -2.5509 0.8726 14 1 7.7517 -1.5391 1.1125 15 6 8.4545 -3.6149 1.2578 16 9 8.8805 -3.3974 2.5725 17 6 5.9996 -2.8701 1.3537 18 16 2.5412 -1.4261 -0.0071 19 1 -0.3633 -0.0001 -1.0277 20 1 -0.3634 -0.8900 0.5139 21 1 -0.3634 0.8900 0.5138 22 1 1.6088 2.8217 1.0269 23 1 0.5241 2.2118 -1.5962 24 1 3.1465 3.1452 -2.2712 25 1 2.4036 5.0022 -0.8855 26 1 5.9755 -0.2621 0.0001 27 1 6.9484 -3.7206 -0.9442 28 1 7.2901 -1.9636 -1.2564 29 1 8.0013 -4.6034 1.1820 30 1 9.3090 -3.5543 0.5839 31 1 5.6808 -2.2681 2.2047 32 1 5.8145 -3.9352 1.4945 There are 44 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 44 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_27_15781662_15704122.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 10:28:45 Heat of formation + Delta-G solvation = -5.473096 kcal Electronic energy + Delta-G solvation = -17145.198562 eV Core-core repulsion = 14149.487111 eV Total energy + Delta-G solvation = -2995.711451 eV No. of doubly occupied orbitals = 44 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 259.078 amu Computer time = 0.41 seconds Orbital eigenvalues (eV) -48.52770 -41.19819 -40.39165 -37.89864 -35.37954 -32.59364 -29.82117 -28.75273 -26.75582 -25.69300 -24.44027 -23.78901 -20.93399 -20.53369 -18.88035 -18.03421 -17.62423 -17.04377 -16.80486 -16.65924 -16.39647 -16.24817 -15.76565 -15.39934 -14.81345 -14.32086 -14.21419 -13.89210 -13.77317 -13.46516 -13.37043 -13.33598 -12.85466 -12.49705 -12.16617 -12.04193 -11.79502 -11.55591 -11.16001 -11.02976 -10.68841 -10.49373 -10.06885 -8.65962 -4.80275 -0.05820 0.12746 0.71431 1.27696 1.64967 1.79552 1.87337 1.96990 3.26544 3.33846 3.38800 3.47812 3.61502 3.69420 4.12434 4.18113 4.21542 4.30061 4.33075 4.48353 4.53550 4.71320 4.75769 4.77230 4.77925 4.86990 5.01722 5.03029 5.08737 5.25548 5.30443 5.69705 6.26872 6.41586 6.89187 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.063 4.063 2 C -0.256 4.256 3 C 0.056 3.944 4 C -0.041 4.041 5 O -0.532 6.532 6 Si 0.780 3.220 7 N -0.559 5.559 8 C 0.312 3.688 9 N -0.671 5.671 10 C 0.120 3.880 11 H 0.101 0.899 12 C -0.119 4.119 13 C -0.144 4.144 14 H 0.095 0.905 15 C 0.062 3.938 16 F -0.242 7.242 17 C -0.150 4.150 18 S 0.120 5.880 19 H 0.077 0.923 20 H 0.065 0.935 21 H 0.086 0.914 22 H 0.132 0.868 23 H 0.385 0.615 24 H -0.305 1.305 25 H -0.291 1.291 26 H 0.417 0.583 27 H 0.124 0.876 28 H 0.087 0.913 29 H 0.094 0.906 30 H 0.090 0.910 31 H 0.061 0.939 32 H 0.110 0.890 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.933 -4.623 -1.747 5.306 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.122 4.122 2 C -0.379 4.379 3 C -0.075 4.075 4 C -0.154 4.154 5 O -0.339 6.339 6 Si 0.685 3.315 7 N -0.287 5.287 8 C -0.059 4.059 9 N -0.311 5.311 10 C 0.014 3.986 11 H 0.119 0.881 12 C -0.157 4.157 13 C -0.163 4.163 14 H 0.113 0.887 15 C 0.007 3.993 16 F -0.223 7.223 17 C -0.189 4.189 18 S 0.369 5.631 19 H 0.095 0.905 20 H 0.084 0.916 21 H 0.105 0.895 22 H 0.149 0.851 23 H 0.234 0.766 24 H -0.232 1.232 25 H -0.219 1.219 26 H 0.256 0.744 27 H 0.142 0.858 28 H 0.105 0.895 29 H 0.112 0.888 30 H 0.108 0.892 31 H 0.080 0.920 32 H 0.129 0.871 Dipole moment (debyes) X Y Z Total from point charges 2.145 -4.750 -1.819 5.521 hybrid contribution -0.652 0.680 -0.487 1.060 sum 1.493 -4.071 -2.306 4.911 Atomic orbital electron populations 1.20207 0.85624 1.03221 1.03122 1.25403 1.02173 0.93271 1.17072 1.20229 0.86968 0.97612 1.02643 1.24470 0.91810 0.95007 1.04065 1.86584 1.28460 1.89130 1.29695 0.92887 0.85442 0.73917 0.79220 1.65726 1.17345 1.17214 1.28380 1.23503 0.92670 0.91489 0.98249 1.43719 1.01172 1.07013 1.79172 1.22079 0.99470 0.78987 0.98058 0.88068 1.23268 0.92338 1.04803 0.95289 1.23195 0.94864 1.00201 0.98051 0.88720 1.22281 0.98791 1.00130 0.78049 1.92736 1.91927 1.96541 1.41123 1.23632 0.95278 1.02865 0.97115 1.83815 0.95737 1.09730 1.73839 0.90453 0.91593 0.89523 0.85061 0.76606 1.23247 1.21883 0.74405 0.85807 0.89462 0.88782 0.89171 0.92009 0.87137 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 -0.03 8.95 71.23 0.64 0.61 16 2 C -0.26 -0.95 6.50 24.57 0.16 -0.79 16 3 C 0.06 0.28 5.92 41.40 0.25 0.53 16 4 C -0.04 -0.12 2.82 71.23 0.20 0.08 16 5 O -0.53 -1.36 9.90 -148.98 -1.47 -2.84 16 6 Si 0.78 2.89 32.08 68.60 2.20 5.09 16 7 N -0.56 -3.24 8.95 -189.87 -1.70 -4.94 16 8 C 0.31 0.90 8.24 179.32 1.48 2.38 16 9 N -0.67 1.45 5.42 -327.90 -1.78 -0.33 16 10 C 0.12 -0.75 4.29 45.52 0.20 -0.56 16 11 H 0.10 -0.68 7.10 -2.39 -0.02 -0.70 16 12 C -0.12 1.19 7.38 31.12 0.23 1.42 16 13 C -0.14 0.98 3.99 -10.27 -0.04 0.94 16 14 H 0.09 -0.47 8.14 -2.39 -0.02 -0.49 16 15 C 0.06 -0.36 7.35 71.98 0.53 0.17 16 16 F -0.24 -0.82 17.36 44.97 0.78 -0.04 16 17 C -0.15 0.86 7.43 31.12 0.23 1.09 16 18 S 0.12 0.16 21.71 -56.49 -1.23 -1.06 16 19 H 0.08 -0.12 8.14 -2.39 -0.02 -0.14 16 20 H 0.07 -0.05 8.14 -2.39 -0.02 -0.07 16 21 H 0.09 0.15 6.62 -2.39 -0.02 0.13 16 22 H 0.13 0.17 7.96 -2.39 -0.02 0.15 16 23 H 0.38 -0.76 8.68 -74.06 -0.64 -1.41 16 24 H -0.31 -3.01 7.11 99.48 0.71 -2.30 16 25 H -0.29 -2.50 7.11 99.48 0.71 -1.80 16 26 H 0.42 -1.47 8.83 -92.71 -0.82 -2.28 16 27 H 0.12 -1.66 8.10 -2.39 -0.02 -1.68 16 28 H 0.09 -0.87 8.14 -2.38 -0.02 -0.89 16 29 H 0.09 -0.87 7.94 -2.38 -0.02 -0.89 16 30 H 0.09 -0.77 8.14 -2.39 -0.02 -0.78 16 31 H 0.06 -0.10 8.14 -2.39 -0.02 -0.12 16 32 H 0.11 -0.90 7.96 -2.38 -0.02 -0.92 16 Total: 0.00 -12.84 284.54 0.40 -12.44 By element: Atomic # 1 Polarization: -13.91 SS G_CDS: -0.27 Total: -14.18 kcal Atomic # 6 Polarization: 2.00 SS G_CDS: 3.87 Total: 5.86 kcal Atomic # 7 Polarization: -1.79 SS G_CDS: -3.48 Total: -5.27 kcal Atomic # 8 Polarization: -1.36 SS G_CDS: -1.47 Total: -2.84 kcal Atomic # 9 Polarization: -0.82 SS G_CDS: 0.78 Total: -0.04 kcal Atomic # 14 Polarization: 2.89 SS G_CDS: 2.20 Total: 5.09 kcal Atomic # 16 Polarization: 0.16 SS G_CDS: -1.23 Total: -1.06 kcal Total: -12.84 0.40 -12.44 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_15781662_15704122.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 6.969 kcal (2) G-P(sol) polarization free energy of solvation -12.838 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -5.868 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.395 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -12.442 kcal (6) G-S(sol) free energy of system = (1) + (5) -5.473 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.41 seconds