Wall clock time and date at job start Mon Mar 8 2021 10:28:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42908 * 1 3 3 Si 1.86293 * 109.46955 * 2 1 4 4 C 1.50698 * 109.46802 * 119.99790 * 2 1 3 5 5 C 1.37982 * 120.32771 * 244.99669 * 4 2 1 6 6 N 1.32007 * 120.90417 * 179.97438 * 5 4 2 7 7 C 1.32340 * 121.64324 * 359.97438 * 6 5 4 8 8 N 1.39146 * 119.71606 * 179.97438 * 7 6 5 9 9 C 1.46500 * 120.00078 * 359.97438 * 8 7 6 10 10 H 1.08998 * 112.85068 * 23.80917 * 9 8 7 11 11 C 1.53777 * 113.61088 * 155.00188 * 9 8 7 12 12 C 1.53781 * 87.08336 * 89.11940 * 11 9 8 13 13 H 1.09002 * 113.61228 * 270.88201 * 12 11 9 14 14 C 1.53000 * 113.61707 * 140.06298 * 12 11 9 15 15 F 1.39901 * 109.47101 * 181.53323 * 14 12 11 16 16 C 1.53775 * 113.61823 * 252.49786 * 9 8 7 17 17 C 1.39341 * 120.56744 * 0.25752 * 7 6 5 18 18 F 1.35099 * 120.47574 * 179.71663 * 17 7 6 19 19 C 1.38446 * 119.05041 * 359.49538 * 17 7 6 20 20 H 0.96702 * 113.99743 * 300.00402 * 1 2 3 21 21 H 1.09001 * 109.47114 * 239.99998 * 2 1 3 22 22 H 1.48502 * 110.00187 * 178.67978 * 3 2 1 23 23 H 1.48496 * 110.00276 * 299.99819 * 3 2 1 24 24 H 1.08004 * 119.55162 * 359.96313 * 5 4 2 25 25 H 0.96999 * 120.00218 * 180.02562 * 8 7 6 26 26 H 1.08997 * 113.61941 * 334.56647 * 11 9 8 27 27 H 1.09009 * 113.68972 * 203.67727 * 11 9 8 28 28 H 1.09004 * 109.46957 * 301.53113 * 14 12 11 29 29 H 1.08997 * 109.46941 * 61.52788 * 14 12 11 30 30 H 1.08993 * 113.61636 * 156.33149 * 16 9 8 31 31 H 1.09008 * 113.61006 * 25.43391 * 16 9 8 32 32 H 1.08002 * 120.75418 * 180.24251 * 19 17 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.6382 -0.0201 2.1938 6 7 3.0829 -0.6309 3.2762 7 6 2.8711 -1.9209 3.4821 8 7 3.3586 -2.5242 4.6373 9 6 4.1034 -1.7319 5.6191 10 1 3.8702 -0.6683 5.5693 11 6 4.0499 -2.3082 7.0438 12 6 5.2997 -3.1251 6.6758 13 1 5.0727 -4.0955 6.2342 14 6 6.3293 -3.2121 7.8043 15 9 7.4403 -3.9410 7.3667 16 6 5.6111 -2.0337 5.6382 17 6 2.1690 -2.6814 2.5492 18 9 1.9587 -3.9994 2.7586 19 6 1.6860 -2.0661 1.4069 20 1 -0.3933 0.4418 0.7650 21 1 1.7924 -0.5138 -0.8900 22 1 3.5346 1.7703 0.0322 23 1 1.5616 2.4678 -1.2085 24 1 2.8303 1.0343 2.0602 25 1 3.2060 -3.4695 4.7922 26 1 3.1685 -2.9205 7.2344 27 1 4.2267 -1.5668 7.8231 28 1 6.6427 -2.2075 8.0884 29 1 5.8836 -3.7107 8.6650 30 1 6.2151 -1.2163 6.0319 31 1 5.9901 -2.4246 4.6938 32 1 1.1349 -2.6285 0.6677 There are 46 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 46 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_27_15781662_17656566.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 10:28:47 Heat of formation + Delta-G solvation = -54.741001 kcal Electronic energy + Delta-G solvation = -18838.115493 eV Core-core repulsion = 15437.199022 eV Total energy + Delta-G solvation = -3400.916470 eV No. of doubly occupied orbitals = 46 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 257.097 amu Computer time = 0.48 seconds Orbital eigenvalues (eV) -49.99759 -48.56012 -41.53715 -40.22845 -37.90675 -35.48957 -33.24131 -31.45885 -29.24813 -26.76857 -26.39108 -25.24535 -23.39740 -22.98671 -20.46115 -19.47677 -18.49520 -18.25430 -17.52767 -17.14757 -17.03712 -16.73695 -16.56482 -16.20821 -16.04553 -15.81462 -15.41037 -14.97520 -14.65873 -14.34110 -14.19450 -13.77832 -13.65422 -13.38413 -13.26736 -12.57614 -12.23808 -12.12917 -11.87401 -11.65214 -11.19348 -11.03632 -10.74177 -10.69458 -10.41794 -8.80661 -4.97449 -0.11537 0.06774 1.31723 1.67295 1.91065 2.00871 2.50399 2.98932 3.22716 3.38549 3.45602 3.49325 3.64193 3.66559 3.81760 3.83991 3.96406 4.15098 4.21347 4.37459 4.43443 4.46541 4.61899 4.68818 4.74443 4.78969 4.86153 4.96093 5.02659 5.06944 5.23011 5.43808 5.97737 6.14546 6.79506 6.91428 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.556 6.556 2 C -0.060 4.060 3 Si 0.776 3.224 4 C -0.206 4.206 5 C 0.150 3.850 6 N -0.523 5.523 7 C 0.384 3.616 8 N -0.699 5.699 9 C 0.131 3.869 10 H 0.108 0.892 11 C -0.124 4.124 12 C -0.146 4.146 13 H 0.090 0.910 14 C 0.063 3.937 15 F -0.242 7.242 16 C -0.148 4.148 17 C -0.039 4.039 18 F -0.142 7.142 19 C -0.041 4.041 20 H 0.396 0.604 21 H 0.110 0.890 22 H -0.282 1.282 23 H -0.297 1.297 24 H 0.187 0.813 25 H 0.414 0.586 26 H 0.082 0.918 27 H 0.120 0.880 28 H 0.094 0.906 29 H 0.090 0.910 30 H 0.104 0.896 31 H 0.052 0.948 32 H 0.153 0.847 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.897 3.697 3.836 5.655 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.364 6.364 2 C -0.170 4.170 3 Si 0.682 3.318 4 C -0.211 4.211 5 C -0.007 4.007 6 N -0.240 5.240 7 C 0.145 3.855 8 N -0.331 5.331 9 C 0.025 3.975 10 H 0.126 0.874 11 C -0.162 4.162 12 C -0.165 4.165 13 H 0.108 0.892 14 C 0.008 3.992 15 F -0.223 7.223 16 C -0.187 4.187 17 C -0.066 4.066 18 F -0.121 7.121 19 C -0.067 4.067 20 H 0.246 0.754 21 H 0.127 0.873 22 H -0.208 1.208 23 H -0.225 1.225 24 H 0.203 0.797 25 H 0.252 0.748 26 H 0.101 0.899 27 H 0.138 0.862 28 H 0.112 0.888 29 H 0.109 0.891 30 H 0.122 0.878 31 H 0.071 0.929 32 H 0.171 0.829 Dipole moment (debyes) X Y Z Total from point charges -0.757 4.477 3.649 5.825 hybrid contribution -0.281 -2.131 -1.006 2.373 sum -1.038 2.347 2.643 3.684 Atomic orbital electron populations 1.86485 1.17181 1.82159 1.50553 1.25008 0.85262 1.10715 0.96020 0.93839 0.77934 0.74657 0.85390 1.21006 1.05451 0.94257 1.00411 1.22725 0.90781 1.00230 0.86985 1.67340 1.25336 1.07264 1.24094 1.18541 0.90482 0.89194 0.87235 1.44321 1.58373 1.12045 1.18377 1.21842 0.90858 0.96717 0.88039 0.87403 1.23291 0.96972 0.99778 0.96147 1.23207 0.96896 0.99375 0.97020 0.89203 1.22276 0.82614 0.97028 0.97244 1.92731 1.57015 1.80748 1.91856 1.23548 0.97263 0.99006 0.98898 1.18155 1.09899 0.79323 0.99205 1.91465 1.93903 1.31652 1.95061 1.21449 0.95333 0.95041 0.94895 0.75367 0.87252 1.20832 1.22463 0.79666 0.74790 0.89941 0.86185 0.88801 0.89129 0.87758 0.92928 0.82883 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 1.00 12.84 -148.98 -1.91 -0.91 16 2 C -0.06 0.16 2.82 71.24 0.20 0.36 16 3 Si 0.78 -3.61 29.83 68.60 2.05 -1.56 16 4 C -0.21 0.21 5.36 -19.77 -0.11 0.10 16 5 C 0.15 -0.19 9.83 84.61 0.83 0.64 16 6 N -0.52 -1.34 9.13 -193.03 -1.76 -3.11 16 7 C 0.38 1.28 7.49 133.08 1.00 2.28 16 8 N -0.70 -0.16 5.41 -321.80 -1.74 -1.90 16 9 C 0.13 -0.34 4.35 45.51 0.20 -0.14 16 10 H 0.11 -0.18 7.41 -2.39 -0.02 -0.19 16 11 C -0.12 0.84 7.39 31.12 0.23 1.07 16 12 C -0.15 0.54 3.97 -10.27 -0.04 0.50 16 13 H 0.09 -0.17 8.14 -2.39 -0.02 -0.19 16 14 C 0.06 -0.21 7.34 71.98 0.53 0.32 16 15 F -0.24 -1.32 17.36 44.97 0.78 -0.54 16 16 C -0.15 0.28 7.43 31.12 0.23 0.51 16 17 C -0.04 -0.16 7.35 22.59 0.17 0.01 16 18 F -0.14 -0.81 16.65 44.97 0.75 -0.06 16 19 C -0.04 -0.07 9.82 22.48 0.22 0.15 16 20 H 0.40 -3.93 8.70 -74.06 -0.64 -4.57 16 21 H 0.11 -0.18 7.96 -2.39 -0.02 -0.20 16 22 H -0.28 -0.03 7.11 99.48 0.71 0.68 16 23 H -0.30 -0.94 7.11 99.48 0.71 -0.23 16 24 H 0.19 -1.30 4.91 -2.91 -0.01 -1.32 16 25 H 0.41 -0.49 8.17 -92.71 -0.76 -1.24 16 26 H 0.08 -0.58 8.14 -2.39 -0.02 -0.60 16 27 H 0.12 -1.22 8.10 -2.38 -0.02 -1.24 16 28 H 0.09 -0.64 7.98 -2.38 -0.02 -0.66 16 29 H 0.09 -0.58 8.14 -2.39 -0.02 -0.60 16 30 H 0.10 -0.41 7.99 -2.39 -0.02 -0.43 16 31 H 0.05 0.14 8.14 -2.38 -0.02 0.12 16 32 H 0.15 0.03 8.06 -2.91 -0.02 0.01 16 Total: 0.00 -14.35 280.43 1.42 -12.93 By element: Atomic # 1 Polarization: -10.46 SS G_CDS: -0.20 Total: -10.66 kcal Atomic # 6 Polarization: 2.35 SS G_CDS: 3.46 Total: 5.81 kcal Atomic # 7 Polarization: -1.50 SS G_CDS: -3.50 Total: -5.00 kcal Atomic # 8 Polarization: 1.00 SS G_CDS: -1.91 Total: -0.91 kcal Atomic # 9 Polarization: -2.13 SS G_CDS: 1.53 Total: -0.60 kcal Atomic # 14 Polarization: -3.61 SS G_CDS: 2.05 Total: -1.56 kcal Total: -14.35 1.42 -12.93 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_15781662_17656566.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -41.809 kcal (2) G-P(sol) polarization free energy of solvation -14.350 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -56.159 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.418 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -12.932 kcal (6) G-S(sol) free energy of system = (1) + (5) -54.741 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.48 seconds