Wall clock time and date at job start Mon Mar 8 2021 05:59:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.35905 * 116.99932 * 2 1 4 4 C 1.38711 * 120.05133 * 179.97438 * 3 2 1 5 5 C 1.50700 * 120.03040 * 359.97438 * 4 3 2 6 6 H 1.08994 * 112.85147 * 348.80348 * 5 4 3 7 7 C 1.53780 * 113.61357 * 120.00063 * 5 4 3 8 8 C 1.53785 * 87.08199 * 140.06189 * 7 5 4 9 9 H 1.08997 * 113.61733 * 219.92797 * 8 7 5 10 10 N 1.46504 * 113.61237 * 89.11505 * 8 7 5 11 11 C 1.39001 * 120.00049 * 156.52915 * 10 8 7 12 12 N 1.32401 * 119.70427 * 180.02562 * 11 10 8 13 13 C 1.31972 * 121.61736 * 179.73321 * 12 11 10 14 14 C 1.38017 * 120.85998 * 0.53411 * 13 12 11 15 15 C 1.50696 * 120.33800 * 179.72545 * 14 13 12 16 16 O 1.42903 * 109.47131 * 119.72264 * 15 14 13 17 17 Si 1.86305 * 109.47185 * 359.72805 * 15 14 13 18 18 C 1.38885 * 119.32808 * 359.45648 * 14 13 12 19 19 C 1.38298 * 118.50341 * 0.27289 * 18 14 13 20 20 C 1.53778 * 87.17109 * 334.52576 * 8 7 5 21 21 C 1.38172 * 119.94027 * 180.27216 * 4 3 2 22 22 C 1.38237 * 120.05623 * 359.49667 * 21 4 3 23 23 C 1.38287 * 120.11174 * 0.50363 * 22 21 4 24 24 C 1.38125 * 120.05528 * 359.74810 * 23 22 21 25 25 H 1.09003 * 109.46774 * 60.00208 * 1 2 3 26 26 H 1.08999 * 109.47075 * 180.02562 * 1 2 3 27 27 H 1.08999 * 109.47142 * 300.00438 * 1 2 3 28 28 H 1.09000 * 113.62084 * 25.51485 * 7 5 4 29 29 H 1.09003 * 113.61503 * 254.61075 * 7 5 4 30 30 H 0.97007 * 119.99734 * 336.53051 * 10 8 7 31 31 H 1.07999 * 119.56964 * 180.28706 * 13 12 11 32 32 H 1.08999 * 109.47358 * 239.72624 * 15 14 13 33 33 H 0.96700 * 114.00311 * 300.00591 * 16 15 14 34 34 H 1.48497 * 110.00233 * 179.97438 * 17 15 14 35 35 H 1.48492 * 109.99800 * 301.31995 * 17 15 14 36 36 H 1.08004 * 120.75074 * 180.29542 * 18 14 13 37 37 H 1.08005 * 120.44711 * 180.02562 * 19 18 14 38 38 H 1.09003 * 113.61387 * 140.02281 * 20 8 7 39 39 H 1.08998 * 113.60951 * 270.92154 * 20 8 7 40 40 H 1.08001 * 119.97021 * 179.74688 * 21 4 3 41 41 H 1.08004 * 119.94719 * 180.25537 * 22 21 4 42 42 H 1.07998 * 119.97484 * 179.72445 * 23 22 21 43 43 H 1.08000 * 120.03141 * 180.02562 * 24 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2109 0.0000 4 6 3.4311 1.2848 0.0005 5 6 4.2537 0.0221 0.0017 6 1 3.6591 -0.8702 0.1971 7 6 5.1808 -0.1103 -1.2181 8 6 6.2400 -0.6697 -0.2536 9 1 7.2497 -0.3155 -0.4609 10 7 6.1706 -2.1233 -0.0849 11 6 7.2942 -2.8294 0.3287 12 7 7.2250 -4.1431 0.4788 13 6 8.2697 -4.8513 0.8646 14 6 9.4771 -4.2409 1.1375 15 6 10.6607 -5.0603 1.5831 16 8 11.7279 -4.9046 0.6456 17 14 10.1731 -6.8560 1.6762 18 6 9.5918 -2.8645 0.9918 19 6 8.4816 -2.1495 0.5809 20 6 5.5286 0.1146 0.8615 21 6 4.0560 2.5171 0.0062 22 6 3.3020 3.6757 0.0009 23 6 1.9210 3.6048 0.0003 24 6 1.2915 2.3753 -0.0001 25 1 -0.3633 0.5138 -0.8900 26 1 -0.3633 -1.0277 0.0005 27 1 -0.3633 0.5139 0.8899 28 1 5.4567 0.8459 -1.6627 29 1 4.8335 -0.8358 -1.9538 30 1 5.3404 -2.5930 -0.2618 31 1 8.1775 -5.9220 0.9719 32 1 10.9880 -4.7212 2.5659 33 1 11.5070 -5.1872 -0.2524 34 1 11.3320 -7.6749 2.1140 35 1 9.0429 -7.0268 2.6240 36 1 10.5270 -2.3638 1.1945 37 1 8.5357 -1.0780 0.4570 38 1 5.4619 -0.4295 1.8037 39 1 5.8995 1.1321 0.9845 40 1 5.1344 2.5752 0.0108 41 1 3.7923 4.6381 0.0012 42 1 1.3341 4.5114 0.0006 43 1 0.2129 2.3203 -0.0010 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_15784316_13915762.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:59:18 Heat of formation + Delta-G solvation = 34.510045 kcal Electronic energy + Delta-G solvation = -24941.236129 eV Core-core repulsion = 21340.435833 eV Total energy + Delta-G solvation = -3600.800295 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 313.146 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -41.78141 -41.21077 -39.97038 -38.24032 -37.76555 -35.33052 -33.35027 -32.19755 -31.08745 -30.82848 -28.27310 -26.77994 -26.75459 -25.71464 -24.68667 -23.27402 -22.82176 -22.23818 -20.10049 -19.28132 -18.69257 -18.38581 -17.42116 -17.28366 -16.82940 -16.70850 -16.45251 -16.13764 -15.97489 -15.71607 -15.39823 -15.29435 -14.92903 -14.75802 -14.36692 -14.22202 -14.01327 -13.97633 -13.56830 -13.30722 -13.26978 -13.06353 -12.80941 -12.38667 -12.31165 -12.10451 -11.96397 -11.86998 -11.68904 -11.23320 -11.03174 -10.67196 -10.34947 -10.32250 -9.79025 -9.08050 -8.65639 -5.00197 0.29178 0.33131 0.47351 0.48985 1.34606 1.66288 2.01137 2.05471 2.30812 2.74507 2.89837 3.40235 3.51488 3.60216 3.63266 3.65349 3.82407 3.85733 3.92950 3.99230 4.03420 4.12179 4.13549 4.17903 4.18836 4.37230 4.39735 4.43593 4.49658 4.54211 4.58873 4.63698 4.69461 4.76700 4.78185 4.93195 4.98824 5.05349 5.06484 5.17573 5.37049 5.38713 5.52364 5.58014 5.62231 5.80514 6.06242 6.41389 6.57650 6.62557 7.20900 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.315 6.315 3 C 0.130 3.870 4 C -0.104 4.104 5 C -0.062 4.062 6 H 0.102 0.898 7 C -0.135 4.135 8 C 0.129 3.871 9 H 0.099 0.901 10 N -0.704 5.704 11 C 0.411 3.589 12 N -0.540 5.540 13 C 0.156 3.844 14 C -0.237 4.237 15 C -0.052 4.052 16 O -0.543 6.543 17 Si 0.682 3.318 18 C -0.006 4.006 19 C -0.238 4.238 20 C -0.151 4.151 21 C -0.080 4.080 22 C -0.155 4.155 23 C -0.083 4.083 24 C -0.207 4.207 25 H 0.056 0.944 26 H 0.101 0.899 27 H 0.055 0.945 28 H 0.098 0.902 29 H 0.077 0.923 30 H 0.407 0.593 31 H 0.154 0.846 32 H 0.112 0.888 33 H 0.378 0.622 34 H -0.254 1.254 35 H -0.256 1.256 36 H 0.136 0.864 37 H 0.135 0.865 38 H 0.075 0.925 39 H 0.095 0.905 40 H 0.129 0.871 41 H 0.124 0.876 42 H 0.124 0.876 43 H 0.128 0.872 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.074 2.327 -2.361 3.911 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.228 6.228 3 C 0.085 3.915 4 C -0.104 4.104 5 C -0.080 4.080 6 H 0.121 0.879 7 C -0.173 4.173 8 C 0.022 3.978 9 H 0.116 0.884 10 N -0.335 5.335 11 C 0.175 3.825 12 N -0.257 5.257 13 C -0.002 4.002 14 C -0.242 4.242 15 C -0.164 4.164 16 O -0.348 6.348 17 Si 0.584 3.416 18 C -0.031 4.031 19 C -0.263 4.263 20 C -0.189 4.189 21 C -0.098 4.098 22 C -0.173 4.173 23 C -0.101 4.101 24 C -0.226 4.226 25 H 0.074 0.926 26 H 0.119 0.881 27 H 0.074 0.926 28 H 0.117 0.883 29 H 0.096 0.904 30 H 0.243 0.757 31 H 0.171 0.829 32 H 0.129 0.871 33 H 0.226 0.774 34 H -0.178 1.178 35 H -0.181 1.181 36 H 0.153 0.847 37 H 0.152 0.848 38 H 0.094 0.906 39 H 0.113 0.887 40 H 0.147 0.853 41 H 0.142 0.858 42 H 0.142 0.858 43 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges -2.543 1.421 -1.511 3.282 hybrid contribution -0.013 1.102 0.455 1.192 sum -2.556 2.523 -1.055 3.744 Atomic orbital electron populations 1.23085 0.78185 1.04179 1.01405 1.86059 1.21445 1.26753 1.88564 1.18876 0.91846 0.84302 0.96479 1.19042 0.90151 0.95348 1.05879 1.21407 0.93963 0.95893 0.96719 0.87937 1.23431 0.95291 1.02088 0.96514 1.21861 0.99745 0.79379 0.96774 0.88361 1.44183 1.11250 1.05399 1.72666 1.18365 0.86776 0.88089 0.89235 1.67135 1.32158 1.05943 1.20424 1.22198 0.87217 0.98789 0.91970 1.20983 0.97260 0.95794 1.10158 1.24774 0.87656 1.09104 0.94839 1.86487 1.37267 1.88747 1.22308 0.94847 0.80403 0.76334 0.90019 1.21186 0.97788 0.92846 0.91325 1.21497 0.93120 1.01329 1.10325 1.23736 0.95685 1.01144 0.98383 1.20858 0.99968 0.91001 0.98007 1.21077 0.93944 0.98499 1.03758 1.20979 0.94798 0.97042 0.97327 1.21271 1.00149 0.92425 1.08711 0.92566 0.88059 0.92607 0.88335 0.90412 0.75657 0.82902 0.87106 0.77437 1.17850 1.18115 0.84663 0.84769 0.90638 0.88713 0.85276 0.85762 0.85755 0.85455 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 9.81 101.05 0.99 0.96 16 2 O -0.31 -0.55 9.43 -19.44 -0.18 -0.73 16 3 C 0.13 0.25 6.66 -39.22 -0.26 -0.01 16 4 C -0.10 -0.11 5.30 -104.47 -0.55 -0.66 16 5 C -0.06 0.01 3.76 -90.82 -0.34 -0.33 16 6 H 0.10 0.10 7.32 -51.93 -0.38 -0.28 16 7 C -0.14 0.20 7.29 -25.92 -0.19 0.01 16 8 C 0.13 -0.18 4.07 -67.12 -0.27 -0.45 16 9 H 0.10 -0.22 6.17 -51.93 -0.32 -0.54 16 10 N -0.70 -0.22 5.44 -53.14 -0.29 -0.51 16 11 C 0.41 0.84 7.65 -155.02 -1.19 -0.34 16 12 N -0.54 -1.70 10.39 -12.44 -0.13 -1.83 16 13 C 0.16 0.24 9.84 -17.57 -0.17 0.07 16 14 C -0.24 -0.22 5.40 -104.47 -0.56 -0.78 16 15 C -0.05 -0.01 2.84 36.00 0.10 0.10 16 16 O -0.54 -0.24 12.78 -35.23 -0.45 -0.69 16 17 Si 0.68 -0.45 29.82 -169.99 -5.07 -5.52 16 18 C -0.01 -0.01 9.77 -39.32 -0.38 -0.39 16 19 C -0.24 -0.23 9.28 -39.23 -0.36 -0.59 16 20 C -0.15 0.16 7.27 -25.78 -0.19 -0.02 16 21 C -0.08 0.00 8.63 -39.61 -0.34 -0.34 16 22 C -0.15 -0.02 10.04 -39.56 -0.40 -0.42 16 23 C -0.08 -0.03 10.04 -39.60 -0.40 -0.43 16 24 C -0.21 -0.20 9.04 -39.43 -0.36 -0.56 16 25 H 0.06 -0.12 7.66 -51.93 -0.40 -0.51 16 26 H 0.10 -0.28 8.14 -51.93 -0.42 -0.70 16 27 H 0.06 -0.11 7.66 -51.93 -0.40 -0.51 16 28 H 0.10 -0.21 7.73 -51.93 -0.40 -0.61 16 29 H 0.08 -0.08 8.14 -51.93 -0.42 -0.50 16 30 H 0.41 0.11 8.83 -40.82 -0.36 -0.25 16 31 H 0.15 -0.07 4.88 -52.49 -0.26 -0.32 16 32 H 0.11 0.05 7.96 -51.93 -0.41 -0.36 16 33 H 0.38 -1.23 8.70 45.56 0.40 -0.83 16 34 H -0.25 -0.63 7.11 56.52 0.40 -0.23 16 35 H -0.26 -0.44 7.11 56.52 0.40 -0.04 16 36 H 0.14 -0.03 8.06 -52.48 -0.42 -0.45 16 37 H 0.13 -0.12 6.06 -52.48 -0.32 -0.44 16 38 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 39 H 0.09 -0.20 6.32 -51.93 -0.33 -0.53 16 40 H 0.13 -0.27 6.65 -52.49 -0.35 -0.62 16 41 H 0.12 -0.20 8.06 -52.48 -0.42 -0.62 16 42 H 0.12 -0.17 8.06 -52.49 -0.42 -0.60 16 43 H 0.13 -0.09 6.30 -52.49 -0.33 -0.42 16 LS Contribution 349.60 15.07 5.27 5.27 Total: 0.00 -6.66 349.60 -11.32 -17.98 By element: Atomic # 1 Polarization: -4.18 SS G_CDS: -5.59 Total: -9.77 kcal Atomic # 6 Polarization: 0.68 SS G_CDS: -4.88 Total: -4.20 kcal Atomic # 7 Polarization: -1.92 SS G_CDS: -0.42 Total: -2.34 kcal Atomic # 8 Polarization: -0.78 SS G_CDS: -0.63 Total: -1.42 kcal Atomic # 14 Polarization: -0.45 SS G_CDS: -5.07 Total: -5.52 kcal Total LS contribution 5.27 Total: 5.27 kcal Total: -6.66 -11.32 -17.98 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_15784316_13915762.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 52.485 kcal (2) G-P(sol) polarization free energy of solvation -6.655 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 45.830 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.320 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.975 kcal (6) G-S(sol) free energy of system = (1) + (5) 34.510 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.80 seconds