Wall clock time and date at job start Mon Mar 8 2021 05:59:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42896 * 1 3 3 C 1.35906 * 116.99754 * 2 1 4 4 C 1.38706 * 120.05835 * 180.02562 * 3 2 1 5 5 C 1.50704 * 120.02690 * 0.02562 * 4 3 2 6 6 H 1.09002 * 112.90631 * 10.96864 * 5 4 3 7 7 C 1.54049 * 113.62132 * 142.22541 * 5 4 3 8 8 C 1.53778 * 86.98292 * 139.97730 * 7 5 4 9 9 H 1.09002 * 113.61412 * 219.98092 * 8 7 5 10 10 N 1.46500 * 113.61572 * 89.16340 * 8 7 5 11 11 C 1.38619 * 120.00285 * 105.85920 * 10 8 7 12 12 N 1.29680 * 124.95194 * 180.02562 * 11 10 8 13 13 C 1.32117 * 116.86756 * 179.71888 * 12 11 10 14 14 C 1.50698 * 122.71459 * 180.34523 * 13 12 11 15 15 O 1.42900 * 109.47494 * 150.18789 * 14 13 12 16 16 Si 1.86306 * 109.46820 * 30.18534 * 14 13 12 17 17 C 1.33329 * 114.57659 * 0.51986 * 13 12 11 18 18 C 1.50706 * 125.94840 * 179.79019 * 17 13 12 19 19 S 1.70970 * 124.94581 * 0.03085 * 11 10 8 20 20 C 1.53774 * 87.17662 * 334.57046 * 8 7 5 21 21 C 1.38161 * 119.94762 * 179.72088 * 4 3 2 22 22 C 1.38249 * 120.05539 * 0.27937 * 21 4 3 23 23 C 1.38291 * 120.10937 * 359.97281 * 22 21 4 24 24 C 1.38128 * 120.05617 * 0.02562 * 23 22 21 25 25 H 1.08999 * 109.47764 * 60.00065 * 1 2 3 26 26 H 1.09009 * 109.47074 * 180.02562 * 1 2 3 27 27 H 1.09004 * 109.47235 * 299.99337 * 1 2 3 28 28 H 1.08996 * 113.60940 * 25.47749 * 7 5 4 29 29 H 1.08997 * 113.69621 * 254.48919 * 7 5 4 30 30 H 0.97002 * 120.00062 * 285.86420 * 10 8 7 31 31 H 1.09000 * 109.47423 * 270.18703 * 14 13 12 32 32 H 0.96700 * 113.99477 * 300.00239 * 15 14 13 33 33 H 1.48498 * 109.99923 * 58.68552 * 16 14 13 34 34 H 1.48506 * 109.99804 * 180.02562 * 16 14 13 35 35 H 1.09001 * 109.46953 * 179.71216 * 18 17 13 36 36 H 1.09000 * 109.47318 * 299.70813 * 18 17 13 37 37 H 1.09000 * 109.47161 * 59.71444 * 18 17 13 38 38 H 1.09001 * 113.61772 * 140.02025 * 20 8 7 39 39 H 1.08993 * 113.61729 * 270.84365 * 20 8 7 40 40 H 1.08002 * 119.97574 * 180.25113 * 21 4 3 41 41 H 1.07995 * 119.94662 * 179.97438 * 22 21 4 42 42 H 1.07997 * 119.96941 * 179.97438 * 23 22 21 43 43 H 1.07997 * 120.02826 * 179.97438 * 24 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0459 1.2110 0.0000 4 6 3.4310 1.2850 -0.0005 5 6 4.2537 0.0224 -0.0017 6 1 3.6594 -0.8711 -0.1931 7 6 5.5250 0.1148 -0.8668 8 6 6.2417 -0.6666 0.2471 9 1 7.2518 -0.3106 0.4497 10 7 6.1734 -2.1205 0.0813 11 6 7.2932 -2.8241 -0.3343 12 7 7.3402 -4.1077 -0.5124 13 6 8.4919 -4.6125 -0.9180 14 6 8.6913 -6.0842 -1.1733 15 8 9.6789 -6.2617 -2.1907 16 14 7.0827 -6.8413 -1.7303 17 6 9.4645 -3.7149 -1.0796 18 6 10.8735 -4.0080 -1.5267 19 16 8.8135 -2.1258 -0.6867 20 6 5.1857 -0.1067 1.2147 21 6 4.0558 2.5173 -0.0064 22 6 3.3017 3.6760 -0.0058 23 6 1.9206 3.6049 0.0000 24 6 1.2912 2.3753 0.0058 25 1 -0.3634 0.5138 -0.8899 26 1 -0.3634 -1.0277 0.0005 27 1 -0.3634 0.5137 0.8901 28 1 5.8941 1.1326 -0.9930 29 1 5.4553 -0.4311 -1.8076 30 1 5.3447 -2.5910 0.2623 31 1 9.0233 -6.5704 -0.2559 32 1 9.4495 -5.8538 -3.0369 33 1 6.6033 -6.1657 -2.9627 34 1 7.2659 -8.2929 -1.9849 35 1 11.4410 -3.0785 -1.5721 36 1 11.3458 -4.6877 -0.8174 37 1 10.8528 -4.4697 -2.5138 38 1 4.8422 -0.8312 1.9530 39 1 5.4628 0.8499 1.6575 40 1 5.1342 2.5754 -0.0109 41 1 3.7919 4.6382 -0.0100 42 1 1.3337 4.5114 0.0008 43 1 0.2127 2.3203 0.0107 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_15784316_15704122.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:59:25 Heat of formation + Delta-G solvation = 37.465837 kcal Electronic energy + Delta-G solvation = -25623.801958 eV Core-core repulsion = 21956.744463 eV Total energy + Delta-G solvation = -3667.057495 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 333.119 amu Computer time = 0.94 seconds Orbital eigenvalues (eV) -41.70683 -40.96312 -40.11736 -38.26927 -37.73300 -35.34754 -32.74184 -31.68486 -31.10593 -29.18439 -28.26477 -26.85309 -26.26156 -25.46708 -24.28763 -23.20498 -22.76995 -20.79257 -20.35012 -19.15433 -18.76251 -17.85168 -17.67023 -17.21423 -16.73959 -16.69025 -16.60579 -16.38466 -15.64866 -15.53336 -15.42903 -15.10792 -15.01340 -14.43624 -14.23632 -14.08694 -13.92703 -13.71111 -13.59797 -13.41716 -13.24792 -13.09858 -12.87502 -12.67258 -12.41930 -12.28816 -12.11229 -11.88902 -11.75964 -11.70918 -11.33595 -10.88179 -10.54049 -10.44558 -9.94786 -9.81203 -9.10266 -8.56403 -4.62921 0.07673 0.23723 0.30632 0.46653 0.84080 1.42978 1.85884 1.88284 2.00652 2.16080 2.28812 2.72112 3.30418 3.33694 3.49311 3.56721 3.59813 3.81977 3.87400 3.97306 4.10363 4.14878 4.17642 4.20194 4.32887 4.38309 4.40008 4.40681 4.53022 4.58695 4.63128 4.65794 4.68626 4.82884 4.85323 4.91548 4.94375 5.01781 5.07361 5.16408 5.33885 5.36358 5.49852 5.57299 5.70564 5.78358 6.30117 6.39227 6.42705 7.00957 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.315 6.315 3 C 0.131 3.869 4 C -0.104 4.104 5 C -0.061 4.061 6 H 0.104 0.896 7 C -0.149 4.149 8 C 0.125 3.875 9 H 0.096 0.904 10 N -0.675 5.675 11 C 0.323 3.677 12 N -0.539 5.539 13 C 0.068 3.932 14 C -0.041 4.041 15 O -0.526 6.526 16 Si 0.721 3.279 17 C -0.244 4.244 18 C -0.059 4.059 19 S 0.102 5.898 20 C -0.132 4.132 21 C -0.080 4.080 22 C -0.154 4.154 23 C -0.083 4.083 24 C -0.207 4.207 25 H 0.055 0.945 26 H 0.101 0.899 27 H 0.056 0.944 28 H 0.098 0.902 29 H 0.077 0.923 30 H 0.415 0.585 31 H 0.124 0.876 32 H 0.375 0.625 33 H -0.268 1.268 34 H -0.261 1.261 35 H 0.058 0.942 36 H 0.075 0.925 37 H 0.079 0.921 38 H 0.080 0.920 39 H 0.101 0.899 40 H 0.130 0.870 41 H 0.125 0.875 42 H 0.125 0.875 43 H 0.128 0.872 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.474 4.233 1.421 5.104 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.228 6.228 3 C 0.086 3.914 4 C -0.105 4.105 5 C -0.079 4.079 6 H 0.123 0.877 7 C -0.188 4.188 8 C 0.019 3.981 9 H 0.114 0.886 10 N -0.315 5.315 11 C -0.048 4.048 12 N -0.265 5.265 13 C -0.063 4.063 14 C -0.154 4.154 15 O -0.331 6.331 16 Si 0.622 3.378 17 C -0.367 4.367 18 C -0.119 4.119 19 S 0.351 5.649 20 C -0.170 4.170 21 C -0.098 4.098 22 C -0.173 4.173 23 C -0.101 4.101 24 C -0.225 4.225 25 H 0.074 0.926 26 H 0.120 0.880 27 H 0.074 0.926 28 H 0.116 0.884 29 H 0.096 0.904 30 H 0.253 0.747 31 H 0.141 0.859 32 H 0.223 0.777 33 H -0.192 1.192 34 H -0.186 1.186 35 H 0.077 0.923 36 H 0.094 0.906 37 H 0.098 0.902 38 H 0.099 0.901 39 H 0.120 0.880 40 H 0.147 0.853 41 H 0.143 0.857 42 H 0.143 0.857 43 H 0.146 0.854 Dipole moment (debyes) X Y Z Total from point charges -2.573 4.189 1.400 5.111 hybrid contribution -0.054 -0.165 -0.821 0.839 sum -2.627 4.023 0.579 4.840 Atomic orbital electron populations 1.23089 0.78145 1.04208 1.01417 1.86056 1.21476 1.26731 1.88552 1.18871 0.91826 0.84316 0.96416 1.19002 0.90134 0.95251 1.06092 1.21419 0.93942 0.96107 0.96481 0.87734 1.23749 0.95575 1.01256 0.98264 1.21969 0.99933 0.78544 0.97693 0.88604 1.43600 1.10090 1.05256 1.72546 1.23242 0.93030 0.90731 0.97827 1.65716 1.26435 1.08731 1.25636 1.20058 0.87371 0.97813 1.01027 1.24458 1.03816 0.91889 0.95218 1.86621 1.44315 1.79015 1.23173 0.93612 0.80390 0.77464 0.86369 1.25136 1.02350 0.93334 1.15839 1.20138 0.88433 1.01194 1.02094 1.83969 1.03393 1.10561 1.66994 1.23416 0.94816 1.02236 0.96515 1.20859 0.99972 0.91008 0.97984 1.21081 0.93941 0.98510 1.03728 1.20988 0.94803 0.97061 0.97231 1.21277 1.00171 0.92419 1.08680 0.92594 0.88030 0.92563 0.88393 0.90389 0.74670 0.85869 0.77688 1.19240 1.18644 0.92321 0.90596 0.90244 0.90099 0.88047 0.85266 0.85743 0.85742 0.85434 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.05 9.81 101.05 0.99 0.95 16 2 O -0.31 -0.38 9.43 -19.44 -0.18 -0.56 16 3 C 0.13 0.18 6.66 -39.22 -0.26 -0.08 16 4 C -0.10 -0.05 5.30 -104.48 -0.55 -0.60 16 5 C -0.06 0.05 3.76 -90.82 -0.34 -0.29 16 6 H 0.10 0.00 7.33 -51.93 -0.38 -0.38 16 7 C -0.15 0.24 7.27 -25.78 -0.19 0.05 16 8 C 0.13 -0.22 4.28 -67.12 -0.29 -0.50 16 9 H 0.10 -0.19 7.11 -51.93 -0.37 -0.56 16 10 N -0.67 0.17 5.42 -54.99 -0.30 -0.13 16 11 C 0.32 0.61 8.24 -87.68 -0.72 -0.11 16 12 N -0.54 -1.66 8.95 -11.36 -0.10 -1.77 16 13 C 0.07 0.19 5.91 -84.18 -0.50 -0.31 16 14 C -0.04 -0.07 2.94 36.00 0.11 0.04 16 15 O -0.53 -0.79 10.17 -35.23 -0.36 -1.15 16 16 Si 0.72 1.22 32.09 -169.99 -5.45 -4.24 16 17 C -0.24 -0.53 6.50 -36.02 -0.23 -0.76 16 18 C -0.06 -0.04 8.92 36.01 0.32 0.29 16 19 S 0.10 0.12 21.71 -107.50 -2.33 -2.21 16 20 C -0.13 0.27 7.29 -25.92 -0.19 0.09 16 21 C -0.08 0.04 8.61 -39.61 -0.34 -0.31 16 22 C -0.15 0.04 10.04 -39.56 -0.40 -0.36 16 23 C -0.08 -0.01 10.04 -39.60 -0.40 -0.40 16 24 C -0.21 -0.12 9.04 -39.43 -0.36 -0.48 16 25 H 0.06 -0.13 7.67 -51.93 -0.40 -0.53 16 26 H 0.10 -0.32 8.14 -51.92 -0.42 -0.74 16 27 H 0.06 -0.14 7.65 -51.93 -0.40 -0.53 16 28 H 0.10 -0.25 6.32 -51.93 -0.33 -0.58 16 29 H 0.08 -0.03 8.14 -51.93 -0.42 -0.45 16 30 H 0.41 -0.34 8.83 -40.82 -0.36 -0.70 16 31 H 0.12 0.11 7.96 -51.93 -0.41 -0.30 16 32 H 0.38 -0.33 8.13 45.56 0.37 0.04 16 33 H -0.27 -1.19 7.11 56.52 0.40 -0.79 16 34 H -0.26 -1.01 7.11 56.52 0.40 -0.61 16 35 H 0.06 -0.01 8.14 -51.93 -0.42 -0.43 16 36 H 0.08 0.07 8.14 -51.93 -0.42 -0.35 16 37 H 0.08 -0.01 6.37 -51.93 -0.33 -0.34 16 38 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 39 H 0.10 -0.28 7.73 -51.93 -0.40 -0.68 16 40 H 0.13 -0.32 6.66 -52.49 -0.35 -0.67 16 41 H 0.12 -0.24 8.06 -52.49 -0.42 -0.66 16 42 H 0.12 -0.21 8.06 -52.49 -0.42 -0.63 16 43 H 0.13 -0.13 6.30 -52.49 -0.33 -0.46 16 LS Contribution 361.49 15.07 5.45 5.45 Total: 0.00 -5.88 361.49 -12.48 -18.35 By element: Atomic # 1 Polarization: -5.10 SS G_CDS: -5.85 Total: -10.94 kcal Atomic # 6 Polarization: 0.55 SS G_CDS: -3.35 Total: -2.80 kcal Atomic # 7 Polarization: -1.49 SS G_CDS: -0.40 Total: -1.89 kcal Atomic # 8 Polarization: -1.17 SS G_CDS: -0.54 Total: -1.71 kcal Atomic # 14 Polarization: 1.22 SS G_CDS: -5.45 Total: -4.24 kcal Atomic # 16 Polarization: 0.12 SS G_CDS: -2.33 Total: -2.21 kcal Total LS contribution 5.45 Total: 5.45 kcal Total: -5.88 -12.48 -18.35 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_15784316_15704122.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 55.819 kcal (2) G-P(sol) polarization free energy of solvation -5.875 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 49.943 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.477 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.353 kcal (6) G-S(sol) free energy of system = (1) + (5) 37.466 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.94 seconds