Wall clock time and date at job start Mon Mar 8 2021 09:12:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13592 * 1 3 3 C 1.47206 * 179.97438 * 2 1 4 4 H 1.09000 * 109.47090 * 3.84202 * 3 2 1 5 5 C 1.53002 * 109.47021 * 123.83955 * 3 2 1 6 6 C 1.52996 * 109.46972 * 179.97438 * 5 3 2 7 7 C 1.53000 * 109.47114 * 299.99749 * 6 5 3 8 8 H 1.08996 * 109.47966 * 300.00526 * 7 6 5 9 9 C 1.53007 * 109.46791 * 179.97438 * 7 6 5 10 10 N 1.46504 * 109.46613 * 175.00244 * 9 7 6 11 11 C 1.38407 * 119.99658 * 180.02562 * 10 9 7 12 12 N 1.32500 * 119.21675 * 359.73180 * 11 10 9 13 13 C 1.32276 * 120.73690 * 179.71767 * 12 11 10 14 14 C 1.38609 * 119.19723 * 0.54857 * 13 12 11 15 15 C 1.50698 * 120.71849 * 179.71145 * 14 13 12 16 16 O 1.42907 * 109.46851 * 245.01981 * 15 14 13 17 17 Si 1.86298 * 109.47329 * 5.01474 * 15 14 13 18 18 C 1.38599 * 118.55761 * 359.72586 * 14 13 12 19 19 N 1.32274 * 119.19942 * 0.02562 * 18 14 13 20 20 C 1.53002 * 109.46673 * 60.00467 * 7 6 5 21 21 C 1.52996 * 109.47343 * 299.99618 * 20 7 6 22 22 H 1.08996 * 109.47407 * 300.00412 * 5 3 2 23 23 H 1.09004 * 109.46733 * 59.99729 * 5 3 2 24 24 H 1.08996 * 109.47134 * 60.00785 * 6 5 3 25 25 H 1.09001 * 109.46993 * 180.02562 * 6 5 3 26 26 H 1.08992 * 109.47354 * 295.00668 * 9 7 6 27 27 H 1.08994 * 109.46790 * 55.01015 * 9 7 6 28 28 H 0.96994 * 120.00180 * 0.02562 * 10 9 7 29 29 H 1.08000 * 120.40191 * 180.25417 * 13 12 11 30 30 H 1.08995 * 109.47669 * 125.01837 * 15 14 13 31 31 H 0.96697 * 113.99937 * 180.02562 * 16 15 14 32 32 H 1.48498 * 110.00296 * 300.00470 * 17 15 14 33 33 H 1.48507 * 109.99754 * 61.32491 * 17 15 14 34 34 H 1.08003 * 120.39709 * 180.02562 * 18 14 13 35 35 H 1.09004 * 109.47059 * 60.00016 * 20 7 6 36 36 H 1.09004 * 109.46930 * 179.97438 * 20 7 6 37 37 H 1.09000 * 109.46870 * 300.00214 * 21 20 7 38 38 H 1.09001 * 109.47372 * 180.02562 * 21 20 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1359 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 1 2.9718 -1.0245 -0.0689 5 6 3.1176 0.8042 -1.1982 6 6 4.6476 0.8054 -1.1978 7 6 5.1567 1.4420 0.0969 8 1 4.7926 2.4671 0.1657 9 6 6.6868 1.4426 0.0975 10 7 7.1743 2.1579 1.2795 11 6 8.5349 2.2898 1.4961 12 7 9.3827 1.7586 0.6274 13 6 10.6890 1.8714 0.8020 14 6 11.1667 2.5450 1.9153 15 6 12.6481 2.6883 2.1514 16 8 13.0124 1.9781 3.3368 17 14 13.5793 1.9885 0.6974 18 6 10.2522 3.0836 2.8067 19 7 8.9588 2.9393 2.5704 20 6 4.6471 0.6384 1.2951 21 6 3.1172 0.6372 1.2948 22 1 2.7544 0.3510 -2.1205 23 1 2.7537 1.8294 -1.1293 24 1 5.0117 -0.2196 -1.2665 25 1 5.0106 1.3782 -2.0511 26 1 7.0506 0.4154 0.1187 27 1 7.0502 1.9383 -0.8026 28 1 6.5436 2.5390 1.9102 29 1 11.3751 1.4398 0.0883 30 1 12.8971 3.7429 2.2687 31 1 13.9541 2.0272 3.5510 32 1 13.2486 0.5509 0.5267 33 1 13.2333 2.7393 -0.5363 34 1 10.5917 3.6147 3.6837 35 1 5.0114 -0.3867 1.2264 36 1 5.0102 1.0917 2.2175 37 1 2.7530 1.6622 1.3634 38 1 2.7541 0.0650 2.1486 There are 50 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 50 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_16496580_12175864.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 09:12:17 Heat of formation + Delta-G solvation = 41.703238 kcal Electronic energy + Delta-G solvation = -20365.503307 eV Core-core repulsion = 17209.297583 eV Total energy + Delta-G solvation = -3156.205724 eV No. of doubly occupied orbitals = 50 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 275.137 amu Computer time = 0.60 seconds Orbital eigenvalues (eV) -42.06912 -40.48750 -38.20734 -37.57388 -36.46452 -34.71626 -33.62738 -32.13981 -31.73388 -27.83451 -26.18844 -25.65334 -23.99073 -23.29584 -22.70806 -21.18502 -19.44736 -18.82266 -18.68290 -18.35991 -16.80778 -16.63091 -16.24661 -16.02773 -15.69272 -15.53200 -15.38727 -15.11367 -14.79636 -14.70893 -14.45039 -14.22097 -14.01402 -13.63649 -13.44543 -13.16671 -13.15771 -12.85913 -12.34840 -12.30042 -12.22693 -11.85612 -11.81584 -11.79109 -11.53999 -11.42176 -11.18708 -10.59537 -9.96928 -9.10084 -5.07395 0.04981 0.16224 1.19835 1.56413 1.77528 1.80534 1.81443 1.87260 2.79224 2.81725 3.08586 3.36294 3.43971 3.46892 3.55507 3.58221 3.72348 3.85658 3.87715 4.00539 4.08209 4.11091 4.14986 4.24212 4.27048 4.45202 4.52439 4.57352 4.62368 4.73087 4.77127 4.85011 4.89814 4.93498 4.97085 5.07486 5.18014 5.26002 5.75444 5.98579 6.38132 6.56983 6.59259 7.28497 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.432 5.432 2 C 0.206 3.794 3 C 0.008 3.992 4 H 0.115 0.885 5 C -0.111 4.111 6 C -0.109 4.109 7 C -0.104 4.104 8 H 0.082 0.918 9 C 0.139 3.861 10 N -0.694 5.694 11 C 0.566 3.434 12 N -0.561 5.561 13 C 0.194 3.806 14 C -0.249 4.249 15 C -0.050 4.050 16 O -0.548 6.548 17 Si 0.680 3.320 18 C 0.227 3.773 19 N -0.568 5.568 20 C -0.115 4.115 21 C -0.112 4.112 22 H 0.076 0.924 23 H 0.074 0.926 24 H 0.074 0.926 25 H 0.076 0.924 26 H 0.071 0.929 27 H 0.070 0.930 28 H 0.415 0.585 29 H 0.158 0.842 30 H 0.076 0.924 31 H 0.384 0.616 32 H -0.249 1.249 33 H -0.253 1.253 34 H 0.172 0.828 35 H 0.073 0.927 36 H 0.071 0.929 37 H 0.073 0.927 38 H 0.075 0.925 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.450 1.178 -0.362 7.552 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.108 5.108 2 C -0.112 4.112 3 C -0.014 4.014 4 H 0.133 0.867 5 C -0.150 4.150 6 C -0.147 4.147 7 C -0.123 4.123 8 H 0.101 0.899 9 C 0.015 3.985 10 N -0.332 5.332 11 C 0.210 3.790 12 N -0.284 5.284 13 C 0.027 3.973 14 C -0.257 4.257 15 C -0.163 4.163 16 O -0.354 6.354 17 Si 0.581 3.419 18 C 0.058 3.942 19 N -0.289 5.289 20 C -0.152 4.152 21 C -0.151 4.151 22 H 0.095 0.905 23 H 0.092 0.908 24 H 0.093 0.907 25 H 0.094 0.906 26 H 0.089 0.911 27 H 0.088 0.912 28 H 0.253 0.747 29 H 0.174 0.826 30 H 0.094 0.906 31 H 0.231 0.769 32 H -0.173 1.173 33 H -0.177 1.177 34 H 0.189 0.811 35 H 0.091 0.909 36 H 0.089 0.911 37 H 0.092 0.908 38 H 0.094 0.906 Dipole moment (debyes) X Y Z Total from point charges 3.904 0.438 -1.497 4.204 hybrid contribution 0.633 0.454 0.639 1.007 sum 4.537 0.891 -0.858 4.703 Atomic orbital electron populations 1.81279 1.13018 1.08416 1.08041 1.29230 0.95135 0.93392 0.93486 1.18972 0.81218 1.03156 0.98032 0.86675 1.21557 0.95929 1.00785 0.96691 1.21475 0.94342 1.02036 0.96818 1.21502 0.93709 1.00981 0.96102 0.89926 1.21414 0.92820 0.97138 0.87091 1.44163 1.00971 1.60148 1.27877 1.19373 0.87190 0.86888 0.85582 1.67912 1.03275 1.25421 1.31757 1.22610 0.91039 0.89804 0.93851 1.20715 0.96369 1.08363 1.00257 1.24300 0.94234 0.99841 0.97877 1.86494 1.30676 1.74889 1.43372 0.95054 0.89873 0.80520 0.76437 1.22824 0.86087 0.89577 0.95672 1.67989 1.18132 1.21934 1.20895 1.21619 0.94298 1.01247 0.98049 1.21568 0.96052 1.01877 0.95565 0.90490 0.90769 0.90731 0.90576 0.91110 0.91199 0.74690 0.82584 0.90626 0.76861 1.17315 1.17730 0.81085 0.90861 0.91067 0.90789 0.90636 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.43 -2.04 18.54 42.15 0.78 -1.25 16 2 C 0.21 0.19 14.65 -20.76 -0.30 -0.12 16 3 C 0.01 -0.02 2.57 -93.40 -0.24 -0.26 16 4 H 0.12 -0.54 8.14 -51.93 -0.42 -0.96 16 5 C -0.11 0.42 5.16 -26.73 -0.14 0.28 16 6 C -0.11 0.48 5.20 -26.73 -0.14 0.34 16 7 C -0.10 0.40 2.23 -90.62 -0.20 0.20 16 8 H 0.08 -0.31 8.14 -51.93 -0.42 -0.74 16 9 C 0.14 -0.24 5.04 -4.04 -0.02 -0.26 16 10 N -0.69 -0.08 5.43 -62.31 -0.34 -0.42 16 11 C 0.57 1.77 8.43 -322.80 -2.72 -0.95 16 12 N -0.56 -2.05 9.59 -13.93 -0.13 -2.18 16 13 C 0.19 0.52 9.92 -17.22 -0.17 0.35 16 14 C -0.25 -0.41 5.40 -104.35 -0.56 -0.98 16 15 C -0.05 0.07 2.82 36.00 0.10 0.17 16 16 O -0.55 0.58 12.82 -35.23 -0.45 0.13 16 17 Si 0.68 -1.53 29.92 -169.99 -5.09 -6.61 16 18 C 0.23 0.45 10.99 -17.23 -0.19 0.26 16 19 N -0.57 -1.93 10.46 -13.93 -0.15 -2.08 16 20 C -0.11 0.45 5.08 -26.73 -0.14 0.31 16 21 C -0.11 0.40 5.16 -26.73 -0.14 0.26 16 22 H 0.08 -0.28 8.14 -51.93 -0.42 -0.71 16 23 H 0.07 -0.25 8.14 -51.93 -0.42 -0.67 16 24 H 0.07 -0.35 8.14 -51.93 -0.42 -0.77 16 25 H 0.08 -0.33 8.14 -51.93 -0.42 -0.75 16 26 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 27 H 0.07 -0.06 8.14 -51.93 -0.42 -0.49 16 28 H 0.42 -0.48 7.77 -40.82 -0.32 -0.80 16 29 H 0.16 0.21 5.04 -52.49 -0.26 -0.06 16 30 H 0.08 -0.24 7.96 -51.93 -0.41 -0.66 16 31 H 0.38 -2.32 8.74 45.56 0.40 -1.92 16 32 H -0.25 -0.21 7.06 56.52 0.40 0.19 16 33 H -0.25 -0.05 7.11 56.52 0.40 0.35 16 34 H 0.17 -0.08 8.06 -52.48 -0.42 -0.50 16 35 H 0.07 -0.28 8.14 -51.93 -0.42 -0.71 16 36 H 0.07 -0.25 7.18 -51.93 -0.37 -0.62 16 37 H 0.07 -0.24 8.14 -51.93 -0.42 -0.66 16 38 H 0.07 -0.25 8.14 -51.93 -0.42 -0.67 16 LS Contribution 317.86 15.07 4.79 4.79 Total: 0.00 -8.96 317.86 -10.68 -19.64 By element: Atomic # 1 Polarization: -6.39 SS G_CDS: -5.24 Total: -11.63 kcal Atomic # 6 Polarization: 4.47 SS G_CDS: -4.86 Total: -0.39 kcal Atomic # 7 Polarization: -6.09 SS G_CDS: 0.16 Total: -5.93 kcal Atomic # 8 Polarization: 0.58 SS G_CDS: -0.45 Total: 0.13 kcal Atomic # 14 Polarization: -1.53 SS G_CDS: -5.09 Total: -6.61 kcal Total LS contribution 4.79 Total: 4.79 kcal Total: -8.96 -10.68 -19.64 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_16496580_12175864.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 61.347 kcal (2) G-P(sol) polarization free energy of solvation -8.960 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 52.388 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.684 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.644 kcal (6) G-S(sol) free energy of system = (1) + (5) 41.703 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.60 seconds