Wall clock time and date at job start Mon Mar 8 2021 09:12:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13595 * 1 3 3 C 1.47203 * 179.97438 * 2 1 4 4 H 1.09000 * 109.47409 * 343.52311 * 3 2 1 5 5 C 1.53006 * 109.46868 * 103.52243 * 3 2 1 6 6 C 1.52999 * 109.46626 * 179.97438 * 5 3 2 7 7 C 1.52997 * 109.47592 * 300.00035 * 6 5 3 8 8 H 1.09000 * 109.47140 * 300.00346 * 7 6 5 9 9 C 1.53002 * 109.47092 * 180.02562 * 7 6 5 10 10 N 1.46504 * 109.47145 * 65.00161 * 9 7 6 11 11 C 1.39007 * 119.99918 * 179.97438 * 10 9 7 12 12 C 1.39098 * 119.70406 * 359.72826 * 11 10 9 13 13 C 1.38337 * 119.09384 * 179.79246 * 12 11 10 14 14 C 1.38842 * 118.50991 * 0.46993 * 13 12 11 15 15 C 1.50695 * 120.33771 * 179.72866 * 14 13 12 16 16 O 1.42901 * 109.47542 * 65.02217 * 15 14 13 17 17 Si 1.86304 * 109.47041 * 185.02316 * 15 14 13 18 18 C 1.38069 * 119.32383 * 359.75037 * 14 13 12 19 19 N 1.31940 * 120.85444 * 0.02562 * 18 14 13 20 20 C 1.52996 * 109.47165 * 60.00300 * 7 6 5 21 21 C 1.52997 * 109.47101 * 223.52126 * 3 2 1 22 22 H 1.08993 * 109.46955 * 300.00020 * 5 3 2 23 23 H 1.09000 * 109.47050 * 59.99849 * 5 3 2 24 24 H 1.09000 * 109.47160 * 60.00369 * 6 5 3 25 25 H 1.09002 * 109.46719 * 180.02562 * 6 5 3 26 26 H 1.09005 * 109.46847 * 185.00127 * 9 7 6 27 27 H 1.08999 * 109.47369 * 304.99894 * 9 7 6 28 28 H 0.96997 * 119.99900 * 0.02562 * 10 9 7 29 29 H 1.07999 * 120.44913 * 359.97438 * 12 11 10 30 30 H 1.07998 * 120.74637 * 180.20491 * 13 12 11 31 31 H 1.08999 * 109.47078 * 305.02416 * 15 14 13 32 32 H 0.96693 * 114.00187 * 179.97438 * 16 15 14 33 33 H 1.48502 * 109.99888 * 178.67859 * 17 15 14 34 34 H 1.48492 * 110.00083 * 299.99813 * 17 15 14 35 35 H 1.07999 * 119.57060 * 179.97438 * 18 14 13 36 36 H 1.08992 * 109.47534 * 180.02562 * 20 7 6 37 37 H 1.08996 * 109.47134 * 59.99508 * 20 7 6 38 38 H 1.09000 * 109.47140 * 300.00349 * 21 3 2 39 39 H 1.09001 * 109.47230 * 59.99493 * 21 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 1 2.9718 -0.9846 0.2915 5 6 3.1178 0.3382 -1.4026 6 6 4.6478 0.3395 -1.4024 7 6 5.1569 1.3860 -0.4091 8 1 4.7927 2.3711 -0.7008 9 6 6.6869 1.3876 -0.4095 10 7 7.1745 1.8270 -1.7193 11 6 8.5410 1.9097 -1.9602 12 6 9.4400 1.5792 -0.9516 13 6 10.7971 1.6618 -1.2065 14 6 11.2110 2.0832 -2.4630 15 6 12.6793 2.1940 -2.7833 16 8 13.2744 0.8954 -2.7461 17 14 12.8905 2.9255 -4.4836 18 6 10.2635 2.4000 -3.4160 19 7 8.9752 2.3075 -3.1463 20 6 4.6471 1.0485 0.9934 21 6 3.1175 1.0468 0.9933 22 1 2.7548 -0.4071 -2.1102 23 1 2.7540 1.3235 -1.6941 24 1 5.0119 -0.6456 -1.1108 25 1 5.0110 0.5804 -2.4015 26 1 7.0496 2.0687 0.3604 27 1 7.0514 0.3809 -0.2051 28 1 6.5437 2.0609 -2.4181 29 1 9.0832 1.2596 0.0164 30 1 11.5186 1.4084 -0.4438 31 1 13.1640 2.8368 -2.0484 32 1 14.2210 0.8907 -2.9436 33 1 14.3346 3.0696 -4.7987 34 1 12.2342 2.0583 -5.4947 35 1 10.5809 2.7286 -4.3946 36 1 5.0093 1.7942 1.7009 37 1 5.0111 0.0633 1.2849 38 1 2.7537 2.0321 0.7018 39 1 2.7542 0.8065 1.9925 There are 50 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 50 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_16496580_13915762.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 09:12:19 Heat of formation + Delta-G solvation = 23.868854 kcal Electronic energy + Delta-G solvation = -20188.641422 eV Core-core repulsion = 17097.088252 eV Total energy + Delta-G solvation = -3091.553170 eV No. of doubly occupied orbitals = 50 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 274.142 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -41.35838 -40.43558 -38.18178 -37.53220 -36.38077 -33.68061 -33.00766 -32.10048 -31.08750 -27.70445 -25.77043 -24.81340 -23.93953 -23.20231 -22.11594 -21.16739 -18.88735 -18.66393 -18.48849 -17.99319 -16.69438 -16.54704 -16.04531 -15.87828 -15.54011 -15.47543 -15.19623 -14.96747 -14.71987 -14.46850 -14.23534 -13.99598 -13.86384 -13.78110 -13.61094 -13.45828 -13.16176 -12.86243 -12.37969 -12.34824 -12.20579 -11.94636 -11.80447 -11.55271 -11.36288 -11.08692 -10.67021 -10.54610 -10.26013 -8.66589 -4.95637 0.31103 0.48816 1.30232 1.59665 1.77640 1.80770 1.96567 2.09265 2.80813 2.86227 3.41096 3.43442 3.46490 3.50750 3.66054 3.81920 3.86699 3.94443 4.05128 4.08041 4.13132 4.14998 4.21690 4.25524 4.33867 4.43620 4.45274 4.52111 4.60184 4.70399 4.80079 4.83746 4.87460 4.91645 4.95568 5.05247 5.08634 5.21618 5.34029 5.55833 6.02514 6.45633 6.55535 6.58689 7.21326 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.432 5.432 2 C 0.205 3.795 3 C 0.008 3.992 4 H 0.115 0.885 5 C -0.112 4.112 6 C -0.114 4.114 7 C -0.102 4.102 8 H 0.083 0.917 9 C 0.130 3.870 10 N -0.723 5.723 11 C 0.407 3.593 12 C -0.238 4.238 13 C -0.005 4.005 14 C -0.189 4.189 15 C -0.060 4.060 16 O -0.538 6.538 17 Si 0.676 3.324 18 C 0.159 3.841 19 N -0.539 5.539 20 C -0.110 4.110 21 C -0.111 4.111 22 H 0.075 0.925 23 H 0.073 0.927 24 H 0.072 0.928 25 H 0.072 0.928 26 H 0.066 0.934 27 H 0.066 0.934 28 H 0.406 0.594 29 H 0.133 0.867 30 H 0.134 0.866 31 H 0.074 0.926 32 H 0.378 0.622 33 H -0.260 1.260 34 H -0.253 1.253 35 H 0.155 0.845 36 H 0.075 0.925 37 H 0.073 0.927 38 H 0.074 0.926 39 H 0.076 0.924 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.156 1.980 2.546 5.261 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.107 5.107 2 C -0.113 4.113 3 C -0.014 4.014 4 H 0.133 0.867 5 C -0.151 4.151 6 C -0.152 4.152 7 C -0.121 4.121 8 H 0.102 0.898 9 C 0.006 3.994 10 N -0.356 5.356 11 C 0.171 3.829 12 C -0.263 4.263 13 C -0.031 4.031 14 C -0.194 4.194 15 C -0.170 4.170 16 O -0.345 6.345 17 Si 0.578 3.422 18 C 0.001 3.999 19 N -0.256 5.256 20 C -0.148 4.148 21 C -0.150 4.150 22 H 0.093 0.907 23 H 0.092 0.908 24 H 0.091 0.909 25 H 0.091 0.909 26 H 0.085 0.915 27 H 0.084 0.916 28 H 0.242 0.758 29 H 0.151 0.849 30 H 0.152 0.848 31 H 0.092 0.908 32 H 0.226 0.774 33 H -0.185 1.185 34 H -0.178 1.178 35 H 0.172 0.828 36 H 0.094 0.906 37 H 0.092 0.908 38 H 0.092 0.908 39 H 0.095 0.905 Dipole moment (debyes) X Y Z Total from point charges 1.453 1.833 1.458 2.756 hybrid contribution 1.666 -0.996 0.697 2.062 sum 3.119 0.837 2.154 3.882 Atomic orbital electron populations 1.81283 1.13027 1.08367 1.08054 1.29231 0.95141 0.93416 0.93493 1.18971 0.81224 1.02734 0.98438 0.86707 1.21574 0.96110 1.03213 0.94209 1.21610 0.94244 0.99595 0.99726 1.21449 0.93530 1.00601 0.96475 0.89842 1.21482 0.93745 0.99895 0.84276 1.44500 1.02584 1.73144 1.15388 1.18374 0.85564 0.89794 0.89149 1.21423 0.93291 1.11019 1.00592 1.21169 0.95010 0.91170 0.95741 1.19902 0.94323 1.09181 0.95997 1.24522 0.92388 0.88637 1.11501 1.86598 1.27439 1.27866 1.92642 0.95176 0.82367 0.88928 0.75750 1.22195 0.86923 0.92998 0.97803 1.67162 1.17461 1.20852 1.20134 1.21484 0.94445 1.03039 0.95795 1.21548 0.95937 0.98677 0.98831 0.90654 0.90786 0.90915 0.90924 0.91541 0.91556 0.75817 0.84896 0.84842 0.90818 0.77376 1.18534 1.17784 0.82836 0.90587 0.90793 0.90750 0.90515 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.43 -1.90 18.54 42.15 0.78 -1.12 16 2 C 0.21 0.11 14.65 -20.76 -0.30 -0.20 16 3 C 0.01 -0.03 2.57 -93.40 -0.24 -0.27 16 4 H 0.12 -0.60 8.14 -51.93 -0.42 -1.02 16 5 C -0.11 0.45 5.16 -26.73 -0.14 0.31 16 6 C -0.11 0.53 5.08 -26.73 -0.14 0.39 16 7 C -0.10 0.51 2.22 -90.62 -0.20 0.30 16 8 H 0.08 -0.38 8.14 -51.93 -0.42 -0.80 16 9 C 0.13 -0.50 4.28 -4.04 -0.02 -0.51 16 10 N -0.72 0.98 5.46 -60.42 -0.33 0.65 16 11 C 0.41 0.55 7.65 -155.01 -1.19 -0.64 16 12 C -0.24 -0.11 9.33 -39.23 -0.37 -0.48 16 13 C -0.01 0.00 9.83 -39.32 -0.39 -0.39 16 14 C -0.19 -0.26 5.39 -104.46 -0.56 -0.82 16 15 C -0.06 0.01 2.81 36.00 0.10 0.11 16 16 O -0.54 -0.55 12.82 -35.23 -0.45 -1.00 16 17 Si 0.68 -0.65 29.88 -169.99 -5.08 -5.73 16 18 C 0.16 0.30 9.84 -17.57 -0.17 0.13 16 19 N -0.54 -1.55 10.39 -12.44 -0.13 -1.68 16 20 C -0.11 0.60 5.20 -26.75 -0.14 0.46 16 21 C -0.11 0.50 5.16 -26.75 -0.14 0.36 16 22 H 0.07 -0.27 8.14 -51.93 -0.42 -0.69 16 23 H 0.07 -0.26 8.14 -51.93 -0.42 -0.69 16 24 H 0.07 -0.34 8.14 -51.93 -0.42 -0.76 16 25 H 0.07 -0.29 7.18 -51.93 -0.37 -0.66 16 26 H 0.07 -0.26 7.92 -51.93 -0.41 -0.67 16 27 H 0.07 -0.26 7.94 -51.93 -0.41 -0.67 16 28 H 0.41 -0.70 7.78 -40.82 -0.32 -1.02 16 29 H 0.13 -0.22 6.71 -52.49 -0.35 -0.57 16 30 H 0.13 -0.07 8.06 -52.49 -0.42 -0.49 16 31 H 0.07 -0.14 7.96 -51.93 -0.41 -0.56 16 32 H 0.38 -1.11 8.74 45.56 0.40 -0.71 16 33 H -0.26 -0.26 7.11 56.52 0.40 0.15 16 34 H -0.25 -0.55 7.05 56.52 0.40 -0.15 16 35 H 0.15 0.02 4.87 -52.49 -0.26 -0.24 16 36 H 0.08 -0.42 8.14 -51.93 -0.42 -0.84 16 37 H 0.07 -0.44 8.14 -51.93 -0.42 -0.86 16 38 H 0.07 -0.29 8.14 -51.93 -0.42 -0.71 16 39 H 0.08 -0.33 8.14 -51.93 -0.42 -0.75 16 LS Contribution 320.83 15.07 4.83 4.83 Total: 0.00 -8.20 320.83 -9.82 -18.03 By element: Atomic # 1 Polarization: -7.18 SS G_CDS: -5.56 Total: -12.75 kcal Atomic # 6 Polarization: 2.65 SS G_CDS: -3.89 Total: -1.24 kcal Atomic # 7 Polarization: -2.47 SS G_CDS: 0.32 Total: -2.15 kcal Atomic # 8 Polarization: -0.55 SS G_CDS: -0.45 Total: -1.00 kcal Atomic # 14 Polarization: -0.65 SS G_CDS: -5.08 Total: -5.73 kcal Total LS contribution 4.83 Total: 4.83 kcal Total: -8.20 -9.82 -18.03 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_16496580_13915762.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 41.897 kcal (2) G-P(sol) polarization free energy of solvation -8.204 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 33.693 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.824 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.028 kcal (6) G-S(sol) free energy of system = (1) + (5) 23.869 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds