Wall clock time and date at job start Mon Mar 8 2021 09:12:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13601 * 1 3 3 C 1.47197 * 179.97438 * 2 1 4 4 H 1.08998 * 109.47229 * 47.81159 * 3 2 1 5 5 C 1.52999 * 109.46944 * 167.81071 * 3 2 1 6 6 C 1.53002 * 109.47200 * 180.02562 * 5 3 2 7 7 C 1.53006 * 109.46833 * 299.99800 * 6 5 3 8 8 H 1.09000 * 109.46884 * 299.99920 * 7 6 5 9 9 C 1.53002 * 109.46833 * 179.97438 * 7 6 5 10 10 N 1.46494 * 109.47154 * 175.00293 * 9 7 6 11 11 C 1.39144 * 120.00339 * 180.02562 * 10 9 7 12 12 N 1.32336 * 119.71367 * 0.02562 * 11 10 9 13 13 C 1.32011 * 121.64556 * 179.75674 * 12 11 10 14 14 C 1.37993 * 120.89651 * 0.49288 * 13 12 11 15 15 C 1.50694 * 120.32186 * 179.77569 * 14 13 12 16 16 O 1.42901 * 109.47118 * 244.71777 * 15 14 13 17 17 Si 1.86298 * 109.47775 * 4.72022 * 15 14 13 18 18 C 1.38899 * 119.34940 * 359.49841 * 14 13 12 19 19 C 1.38446 * 118.48252 * 0.25429 * 18 14 13 20 20 F 1.35102 * 120.46708 * 180.02562 * 19 18 14 21 21 C 1.52999 * 109.47064 * 60.00117 * 7 6 5 22 22 C 1.52993 * 109.47119 * 299.99805 * 21 7 6 23 23 H 1.08998 * 109.47085 * 60.00001 * 5 3 2 24 24 H 1.08997 * 109.47177 * 300.00098 * 5 3 2 25 25 H 1.09005 * 109.47139 * 180.02562 * 6 5 3 26 26 H 1.08998 * 109.47165 * 59.99971 * 6 5 3 27 27 H 1.09006 * 109.47056 * 55.00030 * 9 7 6 28 28 H 1.09001 * 109.47230 * 294.99952 * 9 7 6 29 29 H 0.97001 * 120.00118 * 359.97438 * 10 9 7 30 30 H 1.07996 * 119.55233 * 180.26480 * 13 12 11 31 31 H 1.09004 * 109.47407 * 124.72134 * 15 14 13 32 32 H 0.96708 * 114.00246 * 180.02562 * 16 15 14 33 33 H 1.48506 * 109.99834 * 300.00486 * 17 15 14 34 34 H 1.48502 * 110.00011 * 61.31751 * 17 15 14 35 35 H 1.07997 * 120.76011 * 180.22994 * 18 14 13 36 36 H 1.08998 * 109.47085 * 59.99737 * 21 7 6 37 37 H 1.08997 * 109.47177 * 179.97438 * 21 7 6 38 38 H 1.09000 * 109.47241 * 300.00448 * 22 21 7 39 39 H 1.08998 * 109.47385 * 179.97438 * 22 21 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 1 2.9716 -0.6893 -0.7614 5 6 3.1173 1.4109 -0.3046 6 6 4.6473 1.4115 -0.3052 7 6 5.1580 0.9703 1.0680 8 1 4.7947 1.6603 1.8296 9 6 6.6881 0.9703 1.0671 10 7 7.1771 0.6640 2.4136 11 6 8.5453 0.6082 2.6610 12 7 9.3997 0.8331 1.6758 13 6 10.7051 0.7945 1.8687 14 6 11.2293 0.5061 3.1122 15 6 12.7216 0.4605 3.3167 16 8 13.1149 -0.8696 3.6604 17 14 13.5800 0.9754 1.7455 18 6 10.3680 0.2639 4.1747 19 6 9.0039 0.3161 3.9439 20 9 8.1300 0.0876 4.9485 21 6 4.6487 -0.4399 1.3725 22 6 3.1188 -0.4405 1.3731 23 1 2.7537 2.1008 0.4568 24 1 2.7538 1.7250 -1.2829 25 1 5.0102 2.4163 -0.5218 26 1 5.0106 0.7216 -1.0669 27 1 7.0512 1.9521 0.7632 28 1 7.0510 0.2164 0.3686 29 1 6.5472 0.5009 3.1330 30 1 11.3717 0.9877 1.0414 31 1 12.9990 1.1408 4.1219 32 1 14.0651 -0.9733 3.8075 33 1 13.2101 0.0556 0.6398 34 1 13.2041 2.3685 1.3944 35 1 10.7536 0.0397 5.1582 36 1 5.0120 -1.1298 0.6109 37 1 5.0129 -0.7544 2.3505 38 1 2.7555 0.2494 2.1347 39 1 2.7559 -1.4453 1.5897 There are 53 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 53 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_16496580_17656566.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 09:12:27 Heat of formation + Delta-G solvation = -20.063733 kcal Electronic energy + Delta-G solvation = -22627.136170 eV Core-core repulsion = 19064.223965 eV Total energy + Delta-G solvation = -3562.912205 eV No. of doubly occupied orbitals = 53 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 292.133 amu Computer time = 0.69 seconds Orbital eigenvalues (eV) -49.87842 -41.42818 -40.44771 -38.19625 -37.51347 -36.42226 -33.68025 -33.01389 -32.07654 -31.17393 -27.74555 -26.16113 -24.81840 -23.97782 -23.02527 -22.61867 -21.18276 -19.35616 -18.81893 -18.57609 -18.27942 -18.00550 -16.96116 -16.71829 -16.44094 -15.96836 -15.61178 -15.48775 -15.46841 -15.06211 -14.84840 -14.71901 -14.44066 -14.35169 -14.17384 -13.93955 -13.80661 -13.58940 -13.44541 -13.13103 -12.86863 -12.55775 -12.34923 -12.24739 -12.09677 -11.80016 -11.54767 -11.42195 -11.20267 -10.76860 -10.69362 -10.34936 -8.77083 -5.05119 -0.09497 0.12209 1.19839 1.58255 1.77787 1.81009 1.88518 1.94153 2.51508 2.81339 3.03929 3.17506 3.32111 3.44100 3.48386 3.58453 3.63690 3.82846 3.85061 3.97257 4.07545 4.09986 4.14993 4.23563 4.25002 4.26765 4.46667 4.53459 4.59077 4.61882 4.66347 4.78370 4.84533 4.90047 4.93436 4.96738 4.97062 5.08231 5.23084 5.34427 5.91125 6.13683 6.55671 6.58907 6.92817 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.432 5.432 2 C 0.206 3.794 3 C 0.008 3.992 4 H 0.115 0.885 5 C -0.111 4.111 6 C -0.109 4.109 7 C -0.105 4.105 8 H 0.081 0.919 9 C 0.136 3.864 10 N -0.717 5.717 11 C 0.390 3.610 12 N -0.511 5.511 13 C 0.143 3.857 14 C -0.164 4.164 15 C -0.059 4.059 16 O -0.547 6.547 17 Si 0.681 3.319 18 C -0.035 4.035 19 C -0.019 4.019 20 F -0.132 7.132 21 C -0.114 4.114 22 C -0.112 4.112 23 H 0.073 0.927 24 H 0.076 0.924 25 H 0.075 0.925 26 H 0.074 0.926 27 H 0.069 0.931 28 H 0.070 0.930 29 H 0.413 0.587 30 H 0.154 0.846 31 H 0.076 0.924 32 H 0.384 0.616 33 H -0.247 1.247 34 H -0.251 1.251 35 H 0.151 0.849 36 H 0.073 0.927 37 H 0.069 0.931 38 H 0.073 0.927 39 H 0.075 0.925 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.449 1.166 0.228 7.543 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.107 5.107 2 C -0.112 4.112 3 C -0.014 4.014 4 H 0.133 0.867 5 C -0.150 4.150 6 C -0.147 4.147 7 C -0.124 4.124 8 H 0.100 0.900 9 C 0.012 3.988 10 N -0.350 5.350 11 C 0.151 3.849 12 N -0.228 5.228 13 C -0.014 4.014 14 C -0.169 4.169 15 C -0.171 4.171 16 O -0.353 6.353 17 Si 0.582 3.418 18 C -0.061 4.061 19 C -0.045 4.045 20 F -0.111 7.111 21 C -0.152 4.152 22 C -0.151 4.151 23 H 0.092 0.908 24 H 0.095 0.905 25 H 0.094 0.906 26 H 0.093 0.907 27 H 0.087 0.913 28 H 0.088 0.912 29 H 0.250 0.750 30 H 0.171 0.829 31 H 0.094 0.906 32 H 0.231 0.769 33 H -0.171 1.171 34 H -0.176 1.176 35 H 0.168 0.832 36 H 0.092 0.908 37 H 0.088 0.912 38 H 0.092 0.908 39 H 0.094 0.906 Dipole moment (debyes) X Y Z Total from point charges 4.528 1.555 -1.670 5.071 hybrid contribution -0.131 -0.323 1.692 1.728 sum 4.397 1.232 0.022 4.566 Atomic orbital electron populations 1.81283 1.13007 1.08212 1.08242 1.29229 0.95133 0.93443 0.93438 1.18967 0.81219 1.00366 1.00820 0.86677 1.21559 0.95971 0.94238 1.03204 1.21479 0.94301 1.02663 0.96221 1.21504 0.93945 0.97893 0.99020 0.90049 1.21392 0.92699 1.01646 0.83047 1.44567 1.01580 1.76309 1.12581 1.18405 0.86781 0.92078 0.87620 1.67283 1.03093 1.20879 1.31561 1.22155 0.90411 0.93739 0.95099 1.19918 0.94939 1.08047 0.94012 1.24467 0.93829 0.88355 1.10405 1.86500 1.29424 1.26644 1.92770 0.95082 0.90242 0.80032 0.76427 1.21264 0.90061 0.94069 1.00751 1.17975 0.88100 1.13300 0.85132 1.91493 1.68099 1.92889 1.58652 1.21611 0.94283 0.96523 1.02765 1.21570 0.96061 1.02616 0.94823 0.90790 0.90505 0.90596 0.90748 0.91286 0.91202 0.74991 0.82892 0.90630 0.76866 1.17142 1.17581 0.83150 0.90835 0.91189 0.90816 0.90645 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.43 -2.05 18.54 42.15 0.78 -1.27 16 2 C 0.21 0.19 14.65 -20.76 -0.30 -0.11 16 3 C 0.01 -0.02 2.56 -93.41 -0.24 -0.26 16 4 H 0.12 -0.53 8.14 -51.93 -0.42 -0.95 16 5 C -0.11 0.41 5.16 -26.73 -0.14 0.27 16 6 C -0.11 0.47 5.20 -26.73 -0.14 0.33 16 7 C -0.10 0.40 2.23 -90.62 -0.20 0.20 16 8 H 0.08 -0.30 8.14 -51.93 -0.42 -0.72 16 9 C 0.14 -0.24 5.09 -4.04 -0.02 -0.26 16 10 N -0.72 0.26 5.43 -60.34 -0.33 -0.07 16 11 C 0.39 0.84 7.49 -154.86 -1.16 -0.32 16 12 N -0.51 -1.53 9.57 -12.36 -0.12 -1.64 16 13 C 0.14 0.32 9.84 -17.56 -0.17 0.15 16 14 C -0.16 -0.24 5.39 -104.47 -0.56 -0.80 16 15 C -0.06 0.07 2.81 36.00 0.10 0.17 16 16 O -0.55 0.46 12.82 -35.23 -0.45 0.01 16 17 Si 0.68 -1.55 29.87 -169.99 -5.08 -6.63 16 18 C -0.04 -0.06 9.82 -39.26 -0.39 -0.44 16 19 C -0.02 -0.04 7.35 -39.09 -0.29 -0.33 16 20 F -0.13 -0.30 16.65 2.25 0.04 -0.27 16 21 C -0.11 0.44 5.08 -26.73 -0.14 0.31 16 22 C -0.11 0.39 5.16 -26.73 -0.14 0.25 16 23 H 0.07 -0.24 8.14 -51.93 -0.42 -0.66 16 24 H 0.08 -0.28 8.14 -51.93 -0.42 -0.70 16 25 H 0.08 -0.32 8.14 -51.93 -0.42 -0.74 16 26 H 0.07 -0.34 8.14 -51.93 -0.42 -0.76 16 27 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 28 H 0.07 -0.07 8.14 -51.93 -0.42 -0.50 16 29 H 0.41 -0.65 7.13 -40.82 -0.29 -0.94 16 30 H 0.15 0.18 4.87 -52.49 -0.26 -0.08 16 31 H 0.08 -0.22 7.96 -51.93 -0.41 -0.64 16 32 H 0.38 -2.24 8.74 45.56 0.40 -1.84 16 33 H -0.25 -0.18 7.06 56.52 0.40 0.22 16 34 H -0.25 -0.02 7.11 56.52 0.40 0.38 16 35 H 0.15 0.01 8.06 -52.49 -0.42 -0.41 16 36 H 0.07 -0.28 8.14 -51.93 -0.42 -0.70 16 37 H 0.07 -0.25 7.18 -51.93 -0.37 -0.62 16 38 H 0.07 -0.23 8.14 -51.93 -0.42 -0.65 16 39 H 0.07 -0.24 8.14 -51.93 -0.42 -0.66 16 LS Contribution 328.36 15.07 4.95 4.95 Total: 0.00 -8.06 328.36 -9.20 -17.26 By element: Atomic # 1 Polarization: -6.28 SS G_CDS: -5.21 Total: -11.49 kcal Atomic # 6 Polarization: 2.93 SS G_CDS: -3.78 Total: -0.86 kcal Atomic # 7 Polarization: -3.32 SS G_CDS: 0.34 Total: -2.98 kcal Atomic # 8 Polarization: 0.46 SS G_CDS: -0.45 Total: 0.01 kcal Atomic # 9 Polarization: -0.30 SS G_CDS: 0.04 Total: -0.27 kcal Atomic # 14 Polarization: -1.55 SS G_CDS: -5.08 Total: -6.63 kcal Total LS contribution 4.95 Total: 4.95 kcal Total: -8.06 -9.20 -17.26 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_16496580_17656566.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -2.804 kcal (2) G-P(sol) polarization free energy of solvation -8.060 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -10.864 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.200 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.260 kcal (6) G-S(sol) free energy of system = (1) + (5) -20.064 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.69 seconds