Wall clock time and date at job start Mon Mar 8 2021 06:04:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 C 1.53005 * 109.47253 * 2 1 4 4 C 1.52996 * 109.47003 * 240.00195 * 2 1 3 5 5 O 1.45199 * 109.47258 * 119.99979 * 2 1 3 6 6 C 1.34633 * 117.00008 * 59.99669 * 5 2 1 7 7 O 1.21515 * 120.00065 * 0.02562 * 6 5 2 8 8 N 1.34776 * 120.00346 * 179.97438 * 6 5 2 9 9 C 1.46498 * 120.00224 * 180.02562 * 8 6 5 10 10 H 1.08997 * 112.90871 * 336.25964 * 9 8 6 11 11 C 1.53787 * 113.61269 * 107.51002 * 9 8 6 12 12 C 1.53787 * 87.08199 * 89.11558 * 11 9 8 13 13 H 1.09003 * 113.68507 * 270.87671 * 12 11 9 14 14 C 1.52992 * 113.61317 * 139.98416 * 12 11 9 15 15 C 1.52997 * 109.47482 * 87.50189 * 14 12 11 16 16 N 1.46505 * 109.47212 * 179.97438 * 15 14 12 17 17 C 1.38406 * 119.99805 * 179.97438 * 16 15 14 18 18 N 1.32487 * 119.21713 * 359.73708 * 17 16 15 19 19 C 1.32283 * 120.73953 * 179.71372 * 18 17 16 20 20 C 1.38603 * 119.19375 * 0.54310 * 19 18 17 21 21 C 1.50699 * 120.71797 * 179.75208 * 20 19 18 22 22 O 1.42910 * 109.47100 * 244.97654 * 21 20 19 23 23 Si 1.86292 * 109.47442 * 4.97723 * 21 20 19 24 24 C 1.38605 * 118.56212 * 359.73071 * 20 19 18 25 25 N 1.32277 * 119.19635 * 0.02562 * 24 20 19 26 26 C 1.53780 * 87.07977 * 25.42927 * 12 11 9 27 27 H 1.09010 * 109.47310 * 299.99953 * 1 2 3 28 28 H 1.08999 * 109.47313 * 59.99865 * 1 2 3 29 29 H 1.08996 * 109.47068 * 180.02562 * 1 2 3 30 30 H 1.09000 * 109.47421 * 180.02562 * 3 2 1 31 31 H 1.08999 * 109.47071 * 300.00283 * 3 2 1 32 32 H 1.09002 * 109.47267 * 59.99720 * 3 2 1 33 33 H 1.09001 * 109.47345 * 299.99928 * 4 2 1 34 34 H 1.08999 * 109.47135 * 59.99831 * 4 2 1 35 35 H 1.09000 * 109.47211 * 179.97438 * 4 2 1 36 36 H 0.97008 * 119.99595 * 0.02562 * 8 6 5 37 37 H 1.09001 * 113.61123 * 334.57035 * 11 9 8 38 38 H 1.08997 * 113.61284 * 203.66541 * 11 9 8 39 39 H 1.09002 * 109.47103 * 327.49942 * 14 12 11 40 40 H 1.08998 * 109.46862 * 207.50754 * 14 12 11 41 41 H 1.09002 * 109.47153 * 59.99783 * 15 14 12 42 42 H 1.09001 * 109.46832 * 299.99974 * 15 14 12 43 43 H 0.96996 * 119.99606 * 0.02562 * 16 15 14 44 44 H 1.08004 * 120.39977 * 180.29764 * 19 18 17 45 45 H 1.09000 * 109.47089 * 124.98261 * 21 20 19 46 46 H 0.96696 * 113.99626 * 179.97438 * 22 21 20 47 47 H 1.48502 * 110.00135 * 300.00184 * 23 21 20 48 48 H 1.48499 * 110.00043 * 61.31737 * 23 21 20 49 49 H 1.07989 * 120.40398 * 180.02562 * 24 20 19 50 50 H 1.09007 * 113.61238 * 89.11652 * 26 12 11 51 51 H 1.08997 * 113.61790 * 219.92833 * 26 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0399 -0.7212 -1.2492 5 8 2.0140 -0.6845 1.1855 6 6 1.6522 -1.9722 1.3384 7 8 0.9515 -2.5097 0.5036 8 7 2.0680 -2.6657 2.4166 9 6 1.6748 -4.0671 2.5826 10 1 0.7610 -4.3180 2.0440 11 6 2.8234 -5.0616 2.3441 12 6 3.1510 -4.9209 3.8400 13 1 3.8472 -4.1119 4.0616 14 6 3.5412 -6.2405 4.5086 15 6 5.0462 -6.4667 4.3511 16 7 5.4199 -7.7300 4.9919 17 6 6.7388 -8.1495 4.9778 18 7 7.6497 -7.3991 4.3759 19 6 8.9197 -7.7683 4.3492 20 6 9.2898 -8.9608 4.9508 21 6 10.7259 -9.4173 4.9360 22 8 10.8354 -10.6206 4.1728 23 14 11.7898 -8.0954 4.1672 24 6 8.3105 -9.7242 5.5668 25 7 7.0593 -9.2949 5.5617 26 6 1.6761 -4.5380 4.0465 27 1 -0.3634 0.5139 0.8901 28 1 -0.3634 0.5138 -0.8900 29 1 -0.3633 -1.0276 0.0005 30 1 3.1300 1.4426 -0.0005 31 1 1.6767 1.9564 -0.8900 32 1 1.6767 1.9564 0.8900 33 1 1.6766 -1.7489 -1.2493 34 1 1.6766 -0.2074 -2.1392 35 1 3.1299 -0.7208 -1.2495 36 1 2.6277 -2.2368 3.0828 37 1 3.6044 -4.6773 1.6880 38 1 2.4858 -6.0591 2.0629 39 1 2.9993 -7.0606 4.0377 40 1 3.2889 -6.1994 5.5682 41 1 5.5882 -5.6465 4.8220 42 1 5.2984 -6.5078 3.2915 43 1 4.7428 -8.2727 5.4254 44 1 9.6585 -7.1499 3.8611 45 1 11.0586 -9.6033 5.9572 46 1 11.7346 -10.9723 4.1201 47 1 11.3464 -7.8326 2.7745 48 1 11.7096 -6.8484 4.9696 49 1 8.5658 -10.6582 6.0450 50 1 1.0248 -5.3925 4.2309 51 1 1.5307 -3.7322 4.7660 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_16498396_12175864.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:04:23 Heat of formation + Delta-G solvation = -30.535327 kcal Electronic energy + Delta-G solvation = -30297.966762 eV Core-core repulsion = 26007.339819 eV Total energy + Delta-G solvation = -4290.626943 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 351.199 amu Computer time = 1.16 seconds Orbital eigenvalues (eV) -42.04868 -41.83955 -40.56247 -38.27177 -37.86187 -37.05299 -35.27775 -34.71263 -34.33632 -33.07446 -30.99424 -28.31858 -28.27659 -27.07876 -26.81954 -26.03087 -25.28701 -23.74261 -22.89455 -22.70275 -21.06105 -20.35723 -19.44943 -19.11624 -18.67964 -18.35206 -17.52032 -17.08329 -16.82158 -16.59951 -16.52919 -16.20164 -15.91168 -15.67352 -15.49576 -15.31308 -15.24118 -14.98705 -14.77723 -14.61898 -14.32712 -14.04220 -13.90587 -13.61841 -13.40254 -13.16508 -13.15678 -12.84969 -12.81701 -12.79746 -12.66631 -12.31728 -12.26814 -12.24076 -12.07279 -11.83871 -11.79109 -11.51880 -11.35279 -11.27511 -11.20426 -10.95321 -10.58559 -10.15422 -9.95927 -9.09163 -5.06886 0.06022 0.17487 1.17895 1.20578 1.57094 1.80962 1.88249 1.89001 2.80594 3.08576 3.12101 3.33864 3.34756 3.37284 3.57688 3.63713 3.70383 3.77741 3.78845 3.84560 3.88432 3.98243 4.01961 4.11712 4.17849 4.33001 4.42547 4.46415 4.54604 4.57696 4.61538 4.64033 4.66134 4.73721 4.76860 4.78685 4.79172 4.85758 4.90830 4.94261 4.97329 5.06238 5.07707 5.11884 5.22135 5.37591 5.37953 5.51739 5.62965 5.76499 6.00068 6.39862 6.42609 6.57871 7.29902 7.44244 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.137 3.863 3 C -0.142 4.142 4 C -0.184 4.184 5 O -0.365 6.365 6 C 0.652 3.348 7 O -0.565 6.565 8 N -0.695 5.695 9 C 0.136 3.864 10 H 0.108 0.892 11 C -0.149 4.149 12 C -0.107 4.107 13 H 0.094 0.906 14 C -0.123 4.123 15 C 0.136 3.864 16 N -0.696 5.696 17 C 0.566 3.434 18 N -0.561 5.561 19 C 0.194 3.806 20 C -0.249 4.249 21 C -0.050 4.050 22 O -0.548 6.548 23 Si 0.680 3.320 24 C 0.227 3.773 25 N -0.568 5.568 26 C -0.140 4.140 27 H 0.060 0.940 28 H 0.072 0.928 29 H 0.087 0.913 30 H 0.067 0.933 31 H 0.082 0.918 32 H 0.067 0.933 33 H 0.087 0.913 34 H 0.072 0.928 35 H 0.060 0.940 36 H 0.406 0.594 37 H 0.074 0.926 38 H 0.095 0.905 39 H 0.074 0.926 40 H 0.074 0.926 41 H 0.067 0.933 42 H 0.069 0.931 43 H 0.415 0.585 44 H 0.157 0.843 45 H 0.076 0.924 46 H 0.383 0.617 47 H -0.249 1.249 48 H -0.253 1.253 49 H 0.172 0.828 50 H 0.101 0.899 51 H 0.077 0.923 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.817 0.367 2.597 4.632 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.241 4.241 2 C 0.100 3.900 3 C -0.199 4.199 4 C -0.241 4.241 5 O -0.280 6.280 6 C 0.406 3.594 7 O -0.453 6.453 8 N -0.353 5.353 9 C 0.031 3.969 10 H 0.126 0.874 11 C -0.188 4.188 12 C -0.126 4.126 13 H 0.113 0.887 14 C -0.161 4.161 15 C 0.012 3.988 16 N -0.333 5.333 17 C 0.209 3.791 18 N -0.284 5.284 19 C 0.027 3.973 20 C -0.257 4.257 21 C -0.162 4.162 22 O -0.354 6.354 23 Si 0.581 3.419 24 C 0.058 3.942 25 N -0.289 5.289 26 C -0.178 4.178 27 H 0.079 0.921 28 H 0.091 0.909 29 H 0.106 0.894 30 H 0.086 0.914 31 H 0.101 0.899 32 H 0.086 0.914 33 H 0.106 0.894 34 H 0.091 0.909 35 H 0.079 0.921 36 H 0.241 0.759 37 H 0.092 0.908 38 H 0.114 0.886 39 H 0.093 0.907 40 H 0.092 0.908 41 H 0.085 0.915 42 H 0.087 0.913 43 H 0.253 0.747 44 H 0.174 0.826 45 H 0.094 0.906 46 H 0.231 0.769 47 H -0.173 1.173 48 H -0.177 1.177 49 H 0.190 0.810 50 H 0.119 0.881 51 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges 1.762 1.601 1.591 2.863 hybrid contribution 0.492 -0.440 0.686 0.952 sum 2.254 1.162 2.276 3.408 Atomic orbital electron populations 1.22523 0.93826 1.05056 1.02718 1.22121 0.94458 0.91549 0.81845 1.21880 1.02331 0.92348 1.03342 1.22522 1.01604 1.03466 0.96540 1.86303 1.71476 1.23424 1.46774 1.18074 0.78638 0.80562 0.82132 1.90919 1.40944 1.70507 1.42971 1.44366 1.55439 1.11704 1.23804 1.21786 0.98969 0.78448 0.97650 0.87407 1.23582 0.98810 1.00141 0.96253 1.22532 0.96725 0.97382 0.95934 0.88743 1.21789 0.94609 0.97794 1.01867 1.21360 0.94828 0.84480 0.98098 1.44172 1.03626 1.24580 1.60898 1.19378 0.87130 0.85648 0.86894 1.67911 1.01724 1.35272 1.23474 1.22611 0.91813 0.92484 0.90401 1.20716 0.97124 0.99444 1.08454 1.24301 0.96558 0.95868 0.99506 1.86496 1.34302 1.40639 1.73990 0.95082 0.88478 0.77935 0.80389 1.22829 0.85649 0.96718 0.88967 1.68000 1.21456 1.15277 1.24190 1.23403 0.96714 1.01970 0.95681 0.92119 0.90911 0.89428 0.91402 0.89915 0.91391 0.89415 0.90920 0.92132 0.75873 0.90755 0.88616 0.90709 0.90760 0.91456 0.91307 0.74720 0.82590 0.90602 0.76868 1.17328 1.17730 0.81046 0.88093 0.90410 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.30 8.37 37.16 0.31 0.01 16 2 C 0.14 0.23 1.13 -90.62 -0.10 0.12 16 3 C -0.14 0.06 8.85 37.16 0.33 0.39 16 4 C -0.18 -0.32 8.37 37.16 0.31 -0.01 16 5 O -0.37 -1.01 9.94 -40.31 -0.40 -1.41 16 6 C 0.65 2.04 8.06 54.05 0.44 2.48 16 7 O -0.56 -3.10 11.48 -19.28 -0.22 -3.32 16 8 N -0.69 -0.11 5.27 -57.93 -0.31 -0.42 16 9 C 0.14 -0.10 4.32 -67.12 -0.29 -0.39 16 10 H 0.11 0.08 7.47 -51.93 -0.39 -0.30 16 11 C -0.15 0.21 7.43 -25.91 -0.19 0.02 16 12 C -0.11 0.30 3.53 -89.81 -0.32 -0.02 16 13 H 0.09 -0.27 8.13 -51.93 -0.42 -0.69 16 14 C -0.12 0.33 5.16 -26.74 -0.14 0.19 16 15 C 0.14 -0.05 5.64 -4.04 -0.02 -0.07 16 16 N -0.70 -0.89 5.70 -62.31 -0.36 -1.25 16 17 C 0.57 2.32 8.42 -322.81 -2.72 -0.40 16 18 N -0.56 -2.57 9.59 -13.93 -0.13 -2.70 16 19 C 0.19 0.66 9.92 -17.22 -0.17 0.49 16 20 C -0.25 -0.56 5.40 -104.35 -0.56 -1.12 16 21 C -0.05 0.04 2.82 36.01 0.10 0.15 16 22 O -0.55 0.33 12.82 -35.23 -0.45 -0.12 16 23 Si 0.68 -1.21 29.92 -169.99 -5.09 -6.30 16 24 C 0.23 0.58 10.99 -17.22 -0.19 0.39 16 25 N -0.57 -2.35 10.46 -13.93 -0.15 -2.49 16 26 C -0.14 0.40 7.39 -25.92 -0.19 0.21 16 27 H 0.06 0.08 8.14 -51.92 -0.42 -0.34 16 28 H 0.07 0.02 8.14 -51.93 -0.42 -0.41 16 29 H 0.09 0.33 5.88 -51.93 -0.31 0.02 16 30 H 0.07 -0.03 8.14 -51.93 -0.42 -0.46 16 31 H 0.08 -0.14 8.14 -51.93 -0.42 -0.57 16 32 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 33 H 0.09 0.34 5.88 -51.93 -0.31 0.03 16 34 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 35 H 0.06 0.09 8.14 -51.93 -0.42 -0.33 16 36 H 0.41 -0.71 8.81 -40.82 -0.36 -1.07 16 37 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 38 H 0.10 -0.17 7.90 -51.93 -0.41 -0.58 16 39 H 0.07 -0.21 7.84 -51.93 -0.41 -0.62 16 40 H 0.07 -0.22 8.14 -51.93 -0.42 -0.64 16 41 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 42 H 0.07 0.06 8.14 -51.93 -0.42 -0.37 16 43 H 0.42 -0.08 8.59 -40.82 -0.35 -0.43 16 44 H 0.16 0.32 5.04 -52.48 -0.26 0.05 16 45 H 0.08 -0.22 7.96 -51.93 -0.41 -0.63 16 46 H 0.38 -2.16 8.74 45.56 0.40 -1.76 16 47 H -0.25 -0.34 7.06 56.52 0.40 0.05 16 48 H -0.25 -0.17 7.11 56.52 0.40 0.24 16 49 H 0.17 0.00 8.06 -52.49 -0.42 -0.42 16 50 H 0.10 -0.35 8.10 -51.93 -0.42 -0.77 16 51 H 0.08 -0.23 8.14 -51.93 -0.42 -0.66 16 LS Contribution 411.25 15.07 6.20 6.20 Total: 0.00 -9.06 411.25 -12.65 -21.72 By element: Atomic # 1 Polarization: -4.00 SS G_CDS: -8.34 Total: -12.34 kcal Atomic # 6 Polarization: 5.85 SS G_CDS: -3.41 Total: 2.44 kcal Atomic # 7 Polarization: -5.92 SS G_CDS: -0.94 Total: -6.86 kcal Atomic # 8 Polarization: -3.78 SS G_CDS: -1.07 Total: -4.85 kcal Atomic # 14 Polarization: -1.21 SS G_CDS: -5.09 Total: -6.30 kcal Total LS contribution 6.20 Total: 6.20 kcal Total: -9.06 -12.65 -21.72 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_16498396_12175864.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -8.817 kcal (2) G-P(sol) polarization free energy of solvation -9.064 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -17.881 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.655 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.718 kcal (6) G-S(sol) free energy of system = (1) + (5) -30.535 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.16 seconds