Wall clock time and date at job start Mon Mar 8 2021 06:19:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 C 1.52995 * 109.47383 * 2 1 4 4 C 1.53004 * 109.46994 * 239.99781 * 2 1 3 5 5 O 1.45203 * 109.46959 * 120.00183 * 2 1 3 6 6 C 1.34634 * 117.00260 * 59.99903 * 5 2 1 7 7 O 1.21522 * 119.99765 * 359.97438 * 6 5 2 8 8 N 1.34775 * 120.00590 * 180.02562 * 6 5 2 9 9 C 1.46497 * 120.00275 * 179.97438 * 8 6 5 10 10 C 1.52999 * 109.46958 * 179.97438 * 9 8 6 11 11 F 1.39904 * 112.84961 * 48.80501 * 10 9 8 12 12 C 1.53787 * 113.61615 * 179.97438 * 10 9 8 13 13 C 1.53781 * 87.07987 * 139.98149 * 12 10 9 14 14 H 1.09002 * 113.61228 * 89.11929 * 13 12 10 15 15 C 1.52995 * 113.61293 * 219.93573 * 13 12 10 16 16 N 1.46500 * 109.47108 * 183.47228 * 15 13 12 17 17 C 1.38413 * 120.00032 * 179.97438 * 16 15 13 18 18 N 1.32494 * 119.21828 * 359.73669 * 17 16 15 19 19 C 1.32275 * 120.74190 * 179.71910 * 18 17 16 20 20 C 1.38608 * 119.19602 * 0.53589 * 19 18 17 21 21 C 1.50693 * 120.72259 * 179.75293 * 20 19 18 22 22 O 1.42897 * 109.47160 * 119.97852 * 21 20 19 23 23 Si 1.86306 * 109.47116 * 359.97438 * 21 20 19 24 24 C 1.38607 * 118.55679 * 359.73762 * 20 19 18 25 25 N 1.32277 * 119.19997 * 359.97438 * 24 20 19 26 26 C 1.53779 * 113.61451 * 277.49786 * 10 9 8 27 27 H 1.09000 * 109.47044 * 299.99949 * 1 2 3 28 28 H 1.09008 * 109.46876 * 59.99793 * 1 2 3 29 29 H 1.08995 * 109.47411 * 179.97438 * 1 2 3 30 30 H 1.09002 * 109.47137 * 179.97438 * 3 2 1 31 31 H 1.09000 * 109.47542 * 300.00198 * 3 2 1 32 32 H 1.09000 * 109.46989 * 60.00017 * 3 2 1 33 33 H 1.08995 * 109.47255 * 300.00357 * 4 2 1 34 34 H 1.09000 * 109.46636 * 60.00595 * 4 2 1 35 35 H 1.09002 * 109.46961 * 180.02562 * 4 2 1 36 36 H 0.97003 * 119.99511 * 359.97438 * 8 6 5 37 37 H 1.09000 * 109.47113 * 60.00215 * 9 8 6 38 38 H 1.08994 * 109.47187 * 299.99481 * 9 8 6 39 39 H 1.09005 * 113.61051 * 25.43553 * 12 10 9 40 40 H 1.08996 * 113.69311 * 254.54182 * 12 10 9 41 41 H 1.09005 * 109.47501 * 303.47224 * 15 13 12 42 42 H 1.09004 * 109.47494 * 63.47236 * 15 13 12 43 43 H 0.96997 * 120.00462 * 0.02562 * 16 15 13 44 44 H 1.07998 * 120.40235 * 180.29647 * 19 18 17 45 45 H 1.08998 * 109.47539 * 239.98253 * 21 20 19 46 46 H 0.96701 * 114.00597 * 300.00107 * 22 21 20 47 47 H 1.48496 * 110.00051 * 179.97438 * 23 21 20 48 48 H 1.48506 * 109.99730 * 301.31574 * 23 21 20 49 49 H 1.07997 * 120.40101 * 180.02562 * 24 20 19 50 50 H 1.09003 * 113.61775 * 105.47647 * 26 10 9 51 51 H 1.08996 * 113.61960 * 334.56374 * 26 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4424 0.0000 4 6 2.0400 -0.7213 -1.2493 5 8 2.0139 -0.6845 1.1856 6 6 1.6522 -1.9723 1.3383 7 8 0.9507 -2.5095 0.5039 8 7 2.0671 -2.6655 2.4171 9 6 1.6729 -4.0666 2.5836 10 6 2.2731 -4.6147 3.8799 11 9 2.0544 -3.7750 4.9773 12 6 1.9168 -6.0861 4.1499 13 6 3.3636 -6.2648 4.6394 14 1 3.4930 -6.0617 5.7025 15 6 3.9984 -7.5875 4.2056 16 7 5.3385 -7.6998 4.7869 17 6 6.1112 -8.8198 4.5332 18 7 5.6216 -9.7833 3.7668 19 6 6.3360 -10.8641 3.5003 20 6 7.6058 -10.9859 4.0425 21 6 8.4473 -12.2051 3.7659 22 8 9.6588 -11.8108 3.1188 23 14 7.5048 -13.3728 2.6618 24 6 8.0849 -9.9619 4.8443 25 7 7.3211 -8.9050 5.0665 26 6 3.7330 -5.0759 3.7360 27 1 -0.3633 0.5138 0.8900 28 1 -0.3633 0.5139 -0.8900 29 1 -0.3634 -1.0276 -0.0005 30 1 3.1300 1.4424 0.0005 31 1 1.6767 1.9564 -0.8899 32 1 1.6767 1.9563 0.8900 33 1 1.6766 -1.7489 -1.2493 34 1 1.6767 -0.2074 -2.1392 35 1 3.1300 -0.7217 -1.2490 36 1 2.6267 -2.2366 3.0834 37 1 2.0394 -4.6500 1.7389 38 1 0.5861 -4.1354 2.6285 39 1 1.6881 -6.6527 3.2472 40 1 1.1711 -6.2194 4.9336 41 1 3.3817 -8.4172 4.5513 42 1 4.0704 -7.6166 3.1183 43 1 5.6840 -6.9897 5.3501 44 1 5.9333 -11.6440 2.8710 45 1 8.6833 -12.7045 4.7056 46 1 9.5247 -11.3591 2.2743 47 1 8.3242 -14.5790 2.3811 48 1 6.2277 -13.7653 3.3101 49 1 9.0703 -10.0256 5.2817 50 1 4.4532 -4.3926 4.1861 51 1 4.0012 -5.3663 2.7202 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_27_16499942_12175864.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:19:27 Heat of formation + Delta-G solvation = -73.302787 kcal Electronic energy + Delta-G solvation = -32983.119409 eV Core-core repulsion = 28221.183954 eV Total energy + Delta-G solvation = -4761.935455 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 369.190 amu Computer time = 1.55 seconds Orbital eigenvalues (eV) -48.86251 -42.08029 -41.84031 -39.99174 -38.48720 -38.05377 -36.57669 -35.77515 -34.83897 -34.72582 -32.63790 -30.08990 -28.38182 -28.32161 -27.78715 -27.01634 -26.10654 -25.62218 -23.57671 -23.06625 -22.24450 -21.26250 -20.68374 -19.41760 -19.23937 -18.69196 -18.01861 -17.80465 -17.43637 -17.06101 -16.75929 -16.68657 -16.47651 -16.27618 -15.94917 -15.80854 -15.71537 -15.55226 -15.44622 -15.19937 -14.90183 -14.56969 -14.47796 -14.39001 -14.05027 -13.89921 -13.61593 -13.39766 -13.36458 -13.12713 -13.11451 -12.93537 -12.88912 -12.52115 -12.39223 -12.27997 -12.21414 -12.04332 -11.91078 -11.77870 -11.54221 -11.42588 -11.33225 -11.21071 -11.12712 -10.54071 -10.34166 -10.03603 -9.08359 -4.98242 0.05957 0.14017 1.07243 1.33372 1.64659 1.68727 1.82944 1.99924 2.80679 2.94308 3.09709 3.13794 3.22318 3.24516 3.49582 3.52900 3.56315 3.68542 3.72242 3.73719 3.77649 3.85955 3.92587 4.07766 4.25524 4.28024 4.34995 4.45037 4.56352 4.56862 4.60072 4.65962 4.66900 4.73230 4.75027 4.76273 4.77984 4.83181 4.85954 4.87698 4.90218 4.99931 5.04277 5.17635 5.22619 5.25607 5.31447 5.38365 5.52568 5.76420 6.03881 6.26018 6.39829 6.79376 7.24507 7.27312 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.126 3.874 3 C -0.138 4.138 4 C -0.179 4.179 5 O -0.370 6.370 6 C 0.646 3.354 7 O -0.590 6.590 8 N -0.702 5.702 9 C 0.130 3.870 10 C 0.080 3.920 11 F -0.198 7.198 12 C -0.129 4.129 13 C -0.115 4.115 14 H 0.103 0.897 15 C 0.153 3.847 16 N -0.692 5.692 17 C 0.550 3.450 18 N -0.576 5.576 19 C 0.194 3.806 20 C -0.288 4.288 21 C -0.048 4.048 22 O -0.555 6.555 23 Si 0.769 3.231 24 C 0.212 3.788 25 N -0.591 5.591 26 C -0.143 4.143 27 H 0.060 0.940 28 H 0.088 0.912 29 H 0.064 0.936 30 H 0.069 0.931 31 H 0.099 0.901 32 H 0.068 0.932 33 H 0.065 0.935 34 H 0.087 0.913 35 H 0.062 0.938 36 H 0.415 0.585 37 H 0.102 0.898 38 H 0.077 0.923 39 H 0.126 0.874 40 H 0.091 0.909 41 H 0.068 0.932 42 H 0.076 0.924 43 H 0.418 0.582 44 H 0.188 0.812 45 H 0.113 0.887 46 H 0.395 0.605 47 H -0.297 1.297 48 H -0.282 1.282 49 H 0.180 0.820 50 H 0.085 0.915 51 H 0.114 0.886 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.280 0.485 -2.462 2.525 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.238 4.238 2 C 0.090 3.910 3 C -0.195 4.195 4 C -0.236 4.236 5 O -0.285 6.285 6 C 0.399 3.601 7 O -0.481 6.481 8 N -0.363 5.363 9 C 0.008 3.992 10 C 0.061 3.939 11 F -0.178 7.178 12 C -0.168 4.168 13 C -0.133 4.133 14 H 0.121 0.879 15 C 0.030 3.970 16 N -0.328 5.328 17 C 0.193 3.807 18 N -0.299 5.299 19 C 0.027 3.973 20 C -0.297 4.297 21 C -0.159 4.159 22 O -0.362 6.362 23 Si 0.675 3.325 24 C 0.044 3.956 25 N -0.314 5.314 26 C -0.180 4.180 27 H 0.079 0.921 28 H 0.107 0.893 29 H 0.083 0.917 30 H 0.088 0.912 31 H 0.118 0.882 32 H 0.087 0.913 33 H 0.084 0.916 34 H 0.106 0.894 35 H 0.081 0.919 36 H 0.251 0.749 37 H 0.120 0.880 38 H 0.095 0.905 39 H 0.144 0.856 40 H 0.110 0.890 41 H 0.086 0.914 42 H 0.094 0.906 43 H 0.256 0.744 44 H 0.204 0.796 45 H 0.130 0.870 46 H 0.245 0.755 47 H -0.225 1.225 48 H -0.209 1.209 49 H 0.197 0.803 50 H 0.104 0.896 51 H 0.132 0.868 Dipole moment (debyes) X Y Z Total from point charges -0.961 0.133 -2.349 2.541 hybrid contribution 0.951 -0.062 1.273 1.591 sum -0.009 0.071 -1.075 1.078 Atomic orbital electron populations 1.22479 0.94020 1.03745 1.03511 1.22388 0.94499 0.92601 0.81520 1.21896 1.02478 0.90907 1.04235 1.22470 1.01669 1.02297 0.97199 1.86316 1.71536 1.23213 1.47416 1.18252 0.78685 0.80841 0.82297 1.90915 1.42010 1.70983 1.44205 1.44550 1.55535 1.12734 1.23436 1.21904 1.00990 0.79408 0.96940 1.22161 0.99255 0.90125 0.82353 1.92869 1.95798 1.73330 1.55806 1.23546 0.96782 0.91926 1.04538 1.22698 0.96097 0.93741 1.00790 0.87925 1.21316 0.80507 0.96758 0.98434 1.44238 1.16256 1.17946 1.54407 1.19670 0.86157 0.87676 0.87190 1.67962 1.37970 1.03631 1.20311 1.23185 0.89185 0.92963 0.91965 1.21763 0.99005 1.01757 1.07148 1.24805 0.90076 0.98090 1.02962 1.86475 1.29035 1.80334 1.40406 0.93934 0.75535 0.77681 0.85360 1.23108 0.97936 0.85709 0.88797 1.68003 1.06316 1.28502 1.28551 1.23778 0.94191 0.97587 1.02483 0.92108 0.89336 0.91689 0.91157 0.88197 0.91331 0.91607 0.89398 0.91881 0.74890 0.87986 0.90464 0.85562 0.88987 0.91417 0.90596 0.74408 0.79573 0.87007 0.75532 1.22451 1.20873 0.80278 0.89644 0.86753 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.58 8.37 71.98 0.60 0.03 16 2 C 0.13 0.36 1.13 -10.79 -0.01 0.35 16 3 C -0.14 0.27 8.85 71.98 0.64 0.91 16 4 C -0.18 -0.46 8.37 71.98 0.60 0.14 16 5 O -0.37 -2.14 9.94 -55.44 -0.55 -2.69 16 6 C 0.65 4.21 8.06 129.79 1.05 5.25 16 7 O -0.59 -6.51 11.88 19.77 0.23 -6.27 16 8 N -0.70 -0.53 5.47 -590.86 -3.23 -3.77 16 9 C 0.13 -0.36 5.37 86.38 0.46 0.10 16 10 C 0.08 -0.42 1.67 -10.27 -0.02 -0.44 16 11 F -0.20 -0.03 16.80 44.97 0.76 0.72 16 12 C -0.13 1.07 7.10 31.12 0.22 1.29 16 13 C -0.11 0.87 3.73 -10.25 -0.04 0.83 16 14 H 0.10 -0.68 8.14 -2.39 -0.02 -0.70 16 15 C 0.15 -0.77 5.48 86.38 0.47 -0.30 16 16 N -0.69 0.69 5.70 -351.03 -2.00 -1.31 16 17 C 0.55 2.18 8.43 261.48 2.20 4.38 16 18 N -0.58 -1.78 9.59 -197.98 -1.90 -3.68 16 19 C 0.19 -0.15 9.92 84.71 0.84 0.69 16 20 C -0.29 0.33 5.40 -19.69 -0.11 0.22 16 21 C -0.05 0.16 2.85 71.23 0.20 0.36 16 22 O -0.55 1.43 12.79 -148.98 -1.90 -0.47 16 23 Si 0.77 -3.68 29.87 68.60 2.05 -1.63 16 24 C 0.21 0.35 10.92 84.71 0.93 1.28 16 25 N -0.59 -3.02 10.46 -197.98 -2.07 -5.09 16 26 C -0.14 1.08 7.09 31.13 0.22 1.30 16 27 H 0.06 0.18 8.14 -2.39 -0.02 0.16 16 28 H 0.09 -0.04 8.14 -2.38 -0.02 -0.06 16 29 H 0.06 0.53 5.88 -2.39 -0.01 0.52 16 30 H 0.07 -0.16 8.14 -2.39 -0.02 -0.18 16 31 H 0.10 -0.54 8.14 -2.39 -0.02 -0.56 16 32 H 0.07 -0.13 8.14 -2.39 -0.02 -0.15 16 33 H 0.06 0.49 5.88 -2.39 -0.01 0.48 16 34 H 0.09 -0.08 8.14 -2.39 -0.02 -0.10 16 35 H 0.06 0.12 8.14 -2.39 -0.02 0.10 16 36 H 0.41 -0.66 8.30 -92.71 -0.77 -1.43 16 37 H 0.10 -0.45 7.94 -2.39 -0.02 -0.47 16 38 H 0.08 -0.08 8.14 -2.39 -0.02 -0.10 16 39 H 0.13 -1.43 8.06 -2.38 -0.02 -1.45 16 40 H 0.09 -0.70 8.14 -2.39 -0.02 -0.72 16 41 H 0.07 -0.23 8.14 -2.38 -0.02 -0.25 16 42 H 0.08 -0.39 7.88 -2.39 -0.02 -0.41 16 43 H 0.42 -1.11 8.59 -92.71 -0.80 -1.91 16 44 H 0.19 -1.18 5.04 -2.91 -0.01 -1.19 16 45 H 0.11 -0.30 7.96 -2.39 -0.02 -0.32 16 46 H 0.39 -4.00 8.70 -74.06 -0.64 -4.64 16 47 H -0.30 -0.91 7.11 99.48 0.71 -0.21 16 48 H -0.28 0.07 7.11 99.48 0.71 0.78 16 49 H 0.18 -0.27 8.06 -2.91 -0.02 -0.30 16 50 H 0.08 -0.58 8.14 -2.39 -0.02 -0.60 16 51 H 0.11 -1.01 7.74 -2.39 -0.02 -1.03 16 Total: 0.00 -20.97 417.16 -1.54 -22.51 By element: Atomic # 1 Polarization: -13.55 SS G_CDS: -1.19 Total: -14.74 kcal Atomic # 6 Polarization: 8.15 SS G_CDS: 8.26 Total: 16.41 kcal Atomic # 7 Polarization: -4.64 SS G_CDS: -9.20 Total: -13.85 kcal Atomic # 8 Polarization: -7.22 SS G_CDS: -2.22 Total: -9.44 kcal Atomic # 9 Polarization: -0.03 SS G_CDS: 0.76 Total: 0.72 kcal Atomic # 14 Polarization: -3.68 SS G_CDS: 2.05 Total: -1.63 kcal Total: -20.97 -1.54 -22.51 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_16499942_12175864.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -50.788 kcal (2) G-P(sol) polarization free energy of solvation -20.970 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -71.758 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.545 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.515 kcal (6) G-S(sol) free energy of system = (1) + (5) -73.303 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.55 seconds