Wall clock time and date at job start Mon Mar 8 2021 06:19:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 C 1.53000 * 109.46994 * 2 1 4 4 C 1.52995 * 109.47517 * 239.99724 * 2 1 3 5 5 O 1.45199 * 109.46900 * 119.99536 * 2 1 3 6 6 C 1.34645 * 116.99860 * 60.00620 * 5 2 1 7 7 O 1.21510 * 119.99958 * 359.97438 * 6 5 2 8 8 N 1.34777 * 119.99593 * 179.97438 * 6 5 2 9 9 C 1.46508 * 119.99517 * 179.97438 * 8 6 5 10 10 C 1.52993 * 109.47076 * 180.02562 * 9 8 6 11 11 F 1.39899 * 112.85128 * 48.80557 * 10 9 8 12 12 C 1.53778 * 113.61724 * 180.02562 * 10 9 8 13 13 C 1.53780 * 87.08679 * 140.06457 * 12 10 9 14 14 H 1.08999 * 113.61503 * 89.19725 * 13 12 10 15 15 C 1.52992 * 113.61669 * 220.02242 * 13 12 10 16 16 N 1.46495 * 109.47351 * 183.47101 * 15 13 12 17 17 C 1.38609 * 120.00596 * 179.97438 * 16 15 13 18 18 N 1.29690 * 124.94391 * 359.97438 * 17 16 15 19 19 C 1.32125 * 116.86330 * 180.02562 * 18 17 16 20 20 C 1.33320 * 114.58105 * 359.97438 * 19 18 17 21 21 C 1.50701 * 125.95121 * 180.02562 * 20 19 18 22 22 O 1.42896 * 109.47417 * 64.99793 * 21 20 19 23 23 Si 1.86301 * 109.47149 * 184.99809 * 21 20 19 24 24 S 1.70965 * 124.95596 * 180.32853 * 17 16 15 25 25 C 1.53785 * 87.16866 * 334.61186 * 13 12 10 26 26 H 1.08991 * 109.47330 * 300.00083 * 1 2 3 27 27 H 1.09001 * 109.46761 * 60.00664 * 1 2 3 28 28 H 1.09003 * 109.46776 * 179.97438 * 1 2 3 29 29 H 1.09004 * 109.47386 * 179.97438 * 3 2 1 30 30 H 1.08997 * 109.47060 * 299.99741 * 3 2 1 31 31 H 1.09001 * 109.47125 * 59.99841 * 3 2 1 32 32 H 1.09000 * 109.47098 * 300.00076 * 4 2 1 33 33 H 1.08997 * 109.46942 * 60.00011 * 4 2 1 34 34 H 1.08998 * 109.47464 * 179.97438 * 4 2 1 35 35 H 0.96995 * 120.00571 * 359.97438 * 8 6 5 36 36 H 1.08999 * 109.46738 * 60.00180 * 9 8 6 37 37 H 1.09005 * 109.47072 * 300.00083 * 9 8 6 38 38 H 1.09003 * 113.61149 * 25.51175 * 12 10 9 39 39 H 1.09000 * 113.61190 * 254.61748 * 12 10 9 40 40 H 1.09002 * 109.47122 * 63.46477 * 15 13 12 41 41 H 1.09008 * 109.46751 * 303.46939 * 15 13 12 42 42 H 0.97006 * 120.00108 * 359.97438 * 16 15 13 43 43 H 1.08001 * 122.70419 * 179.97438 * 19 18 17 44 44 H 1.09002 * 109.47060 * 304.99819 * 21 20 19 45 45 H 0.96708 * 114.00101 * 59.99427 * 22 21 20 46 46 H 1.48494 * 109.99914 * 58.67711 * 23 21 20 47 47 H 1.48493 * 110.00101 * 179.97438 * 23 21 20 48 48 H 1.09004 * 113.61505 * 139.93755 * 25 13 12 49 49 H 1.08999 * 113.61101 * 270.83849 * 25 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0401 -0.7213 -1.2491 5 8 2.0140 -0.6844 1.1856 6 6 1.6522 -1.9723 1.3384 7 8 0.9510 -2.5095 0.5041 8 7 2.0680 -2.6656 2.4168 9 6 1.6740 -4.0668 2.5833 10 6 2.2741 -4.6147 3.8796 11 9 2.0552 -3.7751 4.9770 12 6 1.9189 -6.0865 4.1491 13 6 3.3650 -6.2637 4.6412 14 1 3.4921 -6.0619 5.7048 15 6 4.0027 -7.5848 4.2068 16 7 5.3417 -7.6960 4.7905 17 6 6.1178 -8.8160 4.5365 18 7 5.7552 -9.8193 3.7991 19 6 6.6234 -10.8062 3.6649 20 6 7.7716 -10.6274 4.3185 21 6 8.9348 -11.5853 4.3419 22 8 9.4886 -11.6944 3.0291 23 14 10.2369 -10.9525 5.5145 24 16 7.6890 -9.0801 5.1565 25 6 3.7367 -5.0745 3.7398 26 1 -0.3633 0.5138 0.8899 27 1 -0.3633 0.5137 -0.8901 28 1 -0.3633 -1.0277 -0.0005 29 1 3.1300 1.4426 0.0005 30 1 1.6767 1.9563 -0.8900 31 1 1.6766 1.9563 0.8900 32 1 1.6768 -1.7489 -1.2491 33 1 1.6768 -0.2075 -2.1391 34 1 3.1301 -0.7209 -1.2494 35 1 2.6281 -2.2369 3.0826 36 1 2.0398 -4.6499 1.7382 37 1 0.5871 -4.1356 2.6290 38 1 1.6924 -6.6533 3.2460 39 1 1.1719 -6.2191 4.9317 40 1 4.0767 -7.6124 3.1196 41 1 3.3865 -8.4159 4.5501 42 1 5.6853 -6.9857 5.3549 43 1 6.4194 -11.6865 3.0735 44 1 8.5919 -12.5651 4.6742 45 1 9.8147 -10.8582 2.6690 46 1 9.6647 -10.8043 6.8767 47 1 11.3891 -11.8886 5.5471 48 1 4.4553 -4.3912 4.1926 49 1 4.0082 -5.3642 2.7247 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_16499942_15704118.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:19:37 Heat of formation + Delta-G solvation = -84.426396 kcal Electronic energy + Delta-G solvation = -31276.194015 eV Core-core repulsion = 26668.354362 eV Total energy + Delta-G solvation = -4607.839653 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.151 amu Computer time = 1.37 seconds Orbital eigenvalues (eV) -48.98156 -41.71043 -40.81183 -40.06938 -38.40107 -37.93852 -36.52718 -35.66294 -34.77278 -31.67033 -30.23092 -28.33235 -28.29335 -27.92174 -27.31412 -26.25149 -24.40837 -23.52241 -22.49553 -21.33159 -20.93562 -20.66322 -19.71266 -19.21214 -18.16614 -17.80466 -17.42031 -17.24116 -17.10094 -16.69924 -16.63237 -16.50095 -16.17169 -15.97408 -15.69798 -15.59798 -15.41833 -15.26674 -14.93033 -14.83282 -14.50188 -14.37432 -14.03256 -13.99881 -13.81334 -13.65667 -13.41844 -13.10466 -12.88234 -12.85733 -12.83260 -12.54566 -12.39347 -12.33897 -12.31777 -12.27053 -12.04515 -11.68804 -11.56739 -11.30812 -11.19398 -11.00723 -10.80903 -10.31090 -10.25333 -10.17454 -8.77615 -5.15315 -0.03900 0.01559 0.67791 1.10684 1.25063 1.57848 1.85675 1.90285 2.02445 2.04941 2.79057 2.84451 3.02550 3.11578 3.22310 3.32491 3.44009 3.69067 3.77124 3.82473 3.85815 3.93823 3.96666 4.00168 4.16008 4.32734 4.34762 4.41029 4.46968 4.51995 4.56054 4.60091 4.62754 4.63878 4.71177 4.73022 4.75552 4.77920 4.86969 4.92678 5.00652 5.05200 5.10561 5.15341 5.35880 5.42632 5.56830 5.76024 5.97901 6.33183 6.51757 6.98348 7.37134 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.136 3.864 3 C -0.142 4.142 4 C -0.184 4.184 5 O -0.363 6.363 6 C 0.652 3.348 7 O -0.565 6.565 8 N -0.711 5.711 9 C 0.131 3.869 10 C 0.081 3.919 11 F -0.182 7.182 12 C -0.136 4.136 13 C -0.123 4.123 14 H 0.105 0.895 15 C 0.146 3.854 16 N -0.693 5.693 17 C 0.325 3.675 18 N -0.551 5.551 19 C 0.120 3.880 20 C -0.307 4.307 21 C -0.010 4.010 22 O -0.537 6.537 23 Si 0.657 3.343 24 S 0.087 5.913 25 C -0.150 4.150 26 H 0.060 0.940 27 H 0.072 0.928 28 H 0.087 0.913 29 H 0.067 0.933 30 H 0.082 0.918 31 H 0.067 0.933 32 H 0.087 0.913 33 H 0.072 0.928 34 H 0.060 0.940 35 H 0.409 0.591 36 H 0.093 0.907 37 H 0.085 0.915 38 H 0.110 0.890 39 H 0.092 0.908 40 H 0.073 0.927 41 H 0.073 0.927 42 H 0.415 0.585 43 H 0.176 0.824 44 H 0.122 0.878 45 H 0.380 0.620 46 H -0.242 1.242 47 H -0.236 1.236 48 H 0.086 0.914 49 H 0.106 0.894 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.917 3.344 0.927 3.965 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.242 4.242 2 C 0.100 3.900 3 C -0.199 4.199 4 C -0.241 4.241 5 O -0.278 6.278 6 C 0.406 3.594 7 O -0.454 6.454 8 N -0.371 5.371 9 C 0.008 3.992 10 C 0.062 3.938 11 F -0.163 7.163 12 C -0.175 4.175 13 C -0.142 4.142 14 H 0.124 0.876 15 C 0.021 3.979 16 N -0.333 5.333 17 C -0.045 4.045 18 N -0.276 5.276 19 C -0.031 4.031 20 C -0.430 4.430 21 C -0.125 4.125 22 O -0.343 6.343 23 Si 0.557 3.443 24 S 0.336 5.664 25 C -0.187 4.187 26 H 0.079 0.921 27 H 0.091 0.909 28 H 0.106 0.894 29 H 0.086 0.914 30 H 0.101 0.899 31 H 0.086 0.914 32 H 0.106 0.894 33 H 0.091 0.909 34 H 0.079 0.921 35 H 0.245 0.755 36 H 0.111 0.889 37 H 0.103 0.897 38 H 0.128 0.872 39 H 0.111 0.889 40 H 0.092 0.908 41 H 0.091 0.909 42 H 0.252 0.748 43 H 0.193 0.807 44 H 0.139 0.861 45 H 0.227 0.773 46 H -0.166 1.166 47 H -0.159 1.159 48 H 0.105 0.895 49 H 0.125 0.875 Dipole moment (debyes) X Y Z Total from point charges 1.823 2.973 1.624 3.847 hybrid contribution -0.468 -0.417 0.017 0.627 sum 1.356 2.556 1.641 3.326 Atomic orbital electron populations 1.22524 0.93807 1.05052 1.02767 1.22139 0.94491 0.91587 0.81799 1.21880 1.02342 0.92307 1.03377 1.22521 1.01609 1.03431 0.96548 1.86312 1.71448 1.23258 1.46785 1.18024 0.78732 0.80718 0.81959 1.90929 1.40817 1.70508 1.43160 1.44476 1.56118 1.12243 1.24258 1.21785 1.01283 0.80152 0.96000 1.22109 0.98370 0.89862 0.83442 1.92898 1.95649 1.72685 1.55041 1.23510 0.97072 0.93012 1.03859 1.22801 0.96095 0.94407 1.00924 0.87641 1.21371 0.81532 0.96523 0.98512 1.43987 1.16188 1.17928 1.55164 1.23730 0.93631 0.91831 0.95339 1.66489 1.34918 1.02619 1.23590 1.21330 0.87412 0.96965 0.97433 1.25576 1.03906 1.01074 1.12403 1.24116 0.96425 0.99478 0.92453 1.86517 1.80547 1.36718 1.30472 0.94996 0.80514 0.89384 0.79414 1.83949 1.13634 1.17566 1.51300 1.23822 0.95010 0.97793 1.02094 0.92079 0.90881 0.89447 0.91376 0.89887 0.91369 0.89444 0.90884 0.92098 0.75534 0.88859 0.89721 0.87162 0.88913 0.90836 0.90874 0.74788 0.80731 0.86100 0.77288 1.16598 1.15908 0.89514 0.87530 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.24 8.37 37.16 0.31 0.07 16 2 C 0.14 0.17 1.13 -90.62 -0.10 0.07 16 3 C -0.14 0.11 8.85 37.16 0.33 0.44 16 4 C -0.18 -0.20 8.37 37.15 0.31 0.11 16 5 O -0.36 -0.87 9.94 -40.34 -0.40 -1.27 16 6 C 0.65 1.73 8.06 54.06 0.44 2.17 16 7 O -0.57 -2.71 11.88 -19.28 -0.23 -2.94 16 8 N -0.71 0.09 5.47 -65.27 -0.36 -0.27 16 9 C 0.13 -0.22 5.37 -4.04 -0.02 -0.24 16 10 C 0.08 -0.24 1.67 -89.72 -0.15 -0.38 16 11 F -0.18 0.08 16.79 2.25 0.04 0.12 16 12 C -0.14 0.55 7.10 -25.92 -0.18 0.36 16 13 C -0.12 0.51 3.73 -89.81 -0.33 0.18 16 14 H 0.11 -0.43 8.14 -51.93 -0.42 -0.85 16 15 C 0.15 -0.39 5.77 -4.05 -0.02 -0.41 16 16 N -0.69 1.35 5.71 -62.30 -0.36 1.00 16 17 C 0.33 0.19 8.09 -87.68 -0.71 -0.52 16 18 N -0.55 -1.35 10.14 -15.21 -0.15 -1.51 16 19 C 0.12 0.20 11.24 -19.14 -0.22 -0.02 16 20 C -0.31 -0.16 5.73 -36.03 -0.21 -0.36 16 21 C -0.01 0.00 2.99 36.01 0.11 0.11 16 22 O -0.54 -0.07 12.88 -35.23 -0.45 -0.53 16 23 Si 0.66 -0.53 31.06 -169.99 -5.28 -5.81 16 24 S 0.09 -0.04 20.59 -107.50 -2.21 -2.25 16 25 C -0.15 0.62 7.09 -25.82 -0.18 0.44 16 26 H 0.06 0.07 8.14 -51.93 -0.42 -0.35 16 27 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 28 H 0.09 0.29 5.88 -51.93 -0.31 -0.01 16 29 H 0.07 -0.06 8.14 -51.93 -0.42 -0.49 16 30 H 0.08 -0.17 8.14 -51.93 -0.42 -0.60 16 31 H 0.07 -0.05 8.14 -51.93 -0.42 -0.48 16 32 H 0.09 0.27 5.88 -51.93 -0.31 -0.03 16 33 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 34 H 0.06 0.05 8.14 -51.93 -0.42 -0.38 16 35 H 0.41 -0.55 8.30 -40.82 -0.34 -0.89 16 36 H 0.09 -0.20 7.96 -51.93 -0.41 -0.62 16 37 H 0.08 -0.08 8.14 -51.93 -0.42 -0.50 16 38 H 0.11 -0.55 8.06 -51.93 -0.42 -0.97 16 39 H 0.09 -0.35 8.14 -51.93 -0.42 -0.77 16 40 H 0.07 -0.15 7.87 -51.93 -0.41 -0.56 16 41 H 0.07 -0.11 8.14 -51.92 -0.42 -0.53 16 42 H 0.41 -1.64 8.60 -40.82 -0.35 -1.99 16 43 H 0.18 0.10 8.06 -52.49 -0.42 -0.32 16 44 H 0.12 -0.02 7.96 -51.93 -0.41 -0.43 16 45 H 0.38 -1.32 8.70 45.56 0.40 -0.92 16 46 H -0.24 -0.36 7.11 56.52 0.40 0.04 16 47 H -0.24 -0.43 7.11 56.52 0.40 -0.03 16 48 H 0.09 -0.36 8.14 -51.93 -0.42 -0.78 16 49 H 0.11 -0.47 7.75 -51.93 -0.40 -0.87 16 LS Contribution 414.95 15.07 6.25 6.25 Total: 0.00 -7.97 414.95 -11.44 -19.41 By element: Atomic # 1 Polarization: -6.55 SS G_CDS: -7.65 Total: -14.20 kcal Atomic # 6 Polarization: 2.64 SS G_CDS: -0.64 Total: 2.00 kcal Atomic # 7 Polarization: 0.09 SS G_CDS: -0.87 Total: -0.78 kcal Atomic # 8 Polarization: -3.66 SS G_CDS: -1.08 Total: -4.74 kcal Atomic # 9 Polarization: 0.08 SS G_CDS: 0.04 Total: 0.12 kcal Atomic # 14 Polarization: -0.53 SS G_CDS: -5.28 Total: -5.81 kcal Atomic # 16 Polarization: -0.04 SS G_CDS: -2.21 Total: -2.25 kcal Total LS contribution 6.25 Total: 6.25 kcal Total: -7.97 -11.44 -19.41 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_16499942_15704118.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -65.017 kcal (2) G-P(sol) polarization free energy of solvation -7.967 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -72.984 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.443 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.409 kcal (6) G-S(sol) free energy of system = (1) + (5) -84.426 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.37 seconds