Wall clock time and date at job start Mon Mar 8 2021 06:27:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86301 * 109.47440 * 2 1 4 4 C 1.50706 * 109.46938 * 120.00218 * 2 1 3 5 5 C 1.38833 * 120.33551 * 64.72243 * 4 2 1 6 6 C 1.38347 * 118.50392 * 179.73650 * 5 4 2 7 7 C 1.39097 * 119.09627 * 0.51490 * 6 5 4 8 8 N 1.39008 * 119.70499 * 179.72284 * 7 6 5 9 9 C 1.46505 * 119.99845 * 0.02562 * 8 7 6 10 10 C 1.52999 * 109.46737 * 179.97438 * 9 8 7 11 11 F 1.39893 * 112.85363 * 48.79875 * 10 9 8 12 12 C 1.53784 * 113.61230 * 180.02562 * 10 9 8 13 13 C 1.53775 * 87.08324 * 139.97671 * 12 10 9 14 14 H 1.09005 * 113.61723 * 89.19672 * 13 12 10 15 15 C 1.52993 * 113.61870 * 220.01707 * 13 12 10 16 16 O 1.42898 * 109.47527 * 185.00160 * 15 13 12 17 17 C 1.53784 * 113.61092 * 277.49529 * 10 9 8 18 18 N 1.32429 * 120.58915 * 359.74660 * 7 6 5 19 19 C 1.31935 * 121.62214 * 0.02562 * 18 7 6 20 20 H 0.96696 * 114.00485 * 300.00541 * 1 2 3 21 21 H 1.09001 * 109.47268 * 239.99988 * 2 1 3 22 22 H 1.48501 * 110.00188 * 178.67968 * 3 2 1 23 23 H 1.48498 * 109.99815 * 299.99572 * 3 2 1 24 24 H 1.07998 * 120.75295 * 359.97438 * 5 4 2 25 25 H 1.07997 * 120.45388 * 180.25835 * 6 5 4 26 26 H 0.97001 * 120.00020 * 180.02562 * 8 7 6 27 27 H 1.09000 * 109.46680 * 299.99637 * 9 8 7 28 28 H 1.08998 * 109.47192 * 59.99650 * 9 8 7 29 29 H 1.08996 * 113.61232 * 254.52923 * 12 10 9 30 30 H 1.09001 * 113.61313 * 25.42498 * 12 10 9 31 31 H 1.08997 * 109.47121 * 305.00410 * 15 13 12 32 32 H 1.09004 * 109.47208 * 64.99780 * 15 13 12 33 33 H 0.96707 * 114.00294 * 179.97438 * 16 15 13 34 34 H 1.08994 * 113.61452 * 334.56530 * 17 10 9 35 35 H 1.08998 * 113.61566 * 105.47944 * 17 10 9 36 36 H 1.08010 * 119.57233 * 180.02562 * 19 18 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 1.2305 5 6 1.6826 -2.0647 1.4089 6 6 2.1660 -2.6800 2.5498 7 6 2.8715 -1.9230 3.4794 8 7 3.3579 -2.5272 4.6329 9 6 3.1272 -3.9552 4.8650 10 6 3.7614 -4.3645 6.1958 11 9 3.4243 -3.5038 7.2458 12 6 3.5755 -5.8530 6.5348 13 6 5.0231 -5.8349 7.0533 14 1 5.1063 -5.5679 8.1068 15 6 5.8185 -7.0915 6.6943 16 8 7.1048 -7.0344 7.3140 17 6 5.2679 -4.6570 6.0960 18 7 3.0834 -0.6318 3.2754 19 6 2.6381 -0.0199 2.1947 20 1 -0.3934 0.4417 0.7649 21 1 1.7923 -0.5138 -0.8900 22 1 3.5346 1.7702 0.0322 23 1 1.5616 2.4678 -1.2085 24 1 1.1276 -2.6260 0.6719 25 1 1.9944 -3.7328 2.7184 26 1 3.8501 -2.0032 5.2842 27 1 2.0551 -4.1493 4.8981 28 1 3.5760 -4.5319 4.0563 29 1 2.8349 -6.0341 7.3137 30 1 3.4333 -6.4858 5.6588 31 1 5.2838 -7.9732 7.0476 32 1 5.9386 -7.1489 5.6124 33 1 7.6647 -7.8010 7.1296 34 1 5.5882 -4.9631 5.1002 35 1 5.8941 -3.8724 6.5207 36 1 2.8303 1.0346 2.0618 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_16500594_13915762.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:27:06 Heat of formation + Delta-G solvation = -58.648905 kcal Electronic energy + Delta-G solvation = -20190.062592 eV Core-core repulsion = 16784.210827 eV Total energy + Delta-G solvation = -3405.851765 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 269.121 amu Computer time = 0.52 seconds Orbital eigenvalues (eV) -48.88559 -41.38639 -40.08046 -38.13828 -37.36395 -36.35261 -33.47404 -31.96695 -29.93059 -27.53431 -27.19431 -25.71951 -24.80164 -22.74945 -22.04972 -20.87596 -18.87533 -18.54789 -18.39358 -17.73670 -17.09622 -16.80083 -16.59196 -16.48862 -16.08152 -15.93650 -15.48751 -15.45038 -15.15044 -14.85919 -14.32893 -14.23320 -14.04422 -13.87490 -13.67386 -13.38185 -13.33785 -12.52921 -12.36815 -12.03551 -11.99737 -11.59201 -11.53301 -11.21850 -10.99449 -10.73497 -10.40330 -10.37914 -8.76187 -5.01947 0.23747 0.41470 1.31962 1.64987 1.91570 1.99726 2.83603 2.86107 2.95410 3.01994 3.17715 3.35760 3.49593 3.59031 3.62297 3.77530 3.97986 4.02522 4.07981 4.14921 4.23414 4.27549 4.32898 4.35954 4.38943 4.49895 4.51774 4.66355 4.71860 4.78342 4.80708 4.98438 5.20088 5.27181 5.46351 5.91513 6.46283 6.55858 6.59898 7.13761 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.543 6.543 2 C -0.052 4.052 3 Si 0.680 3.320 4 C -0.236 4.236 5 C -0.004 4.004 6 C -0.240 4.240 7 C 0.409 3.591 8 N -0.721 5.721 9 C 0.122 3.878 10 C 0.082 3.918 11 F -0.182 7.182 12 C -0.142 4.142 13 C -0.109 4.109 14 H 0.105 0.895 15 C 0.086 3.914 16 O -0.573 6.573 17 C -0.146 4.146 18 N -0.537 5.537 19 C 0.159 3.841 20 H 0.379 0.621 21 H 0.112 0.888 22 H -0.256 1.256 23 H -0.253 1.253 24 H 0.136 0.864 25 H 0.132 0.868 26 H 0.410 0.590 27 H 0.077 0.923 28 H 0.084 0.916 29 H 0.090 0.910 30 H 0.105 0.895 31 H 0.050 0.950 32 H 0.049 0.951 33 H 0.382 0.618 34 H 0.102 0.898 35 H 0.085 0.915 36 H 0.156 0.844 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.526 -3.931 0.182 3.971 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.348 6.348 2 C -0.164 4.164 3 Si 0.582 3.418 4 C -0.241 4.241 5 C -0.030 4.030 6 C -0.265 4.265 7 C 0.173 3.827 8 N -0.354 5.354 9 C -0.004 4.004 10 C 0.064 3.936 11 F -0.162 7.162 12 C -0.180 4.180 13 C -0.127 4.127 14 H 0.124 0.876 15 C 0.008 3.992 16 O -0.379 6.379 17 C -0.183 4.183 18 N -0.254 5.254 19 C 0.001 3.999 20 H 0.226 0.774 21 H 0.129 0.871 22 H -0.181 1.181 23 H -0.178 1.178 24 H 0.154 0.846 25 H 0.150 0.850 26 H 0.246 0.754 27 H 0.095 0.905 28 H 0.102 0.898 29 H 0.109 0.891 30 H 0.124 0.876 31 H 0.069 0.931 32 H 0.067 0.933 33 H 0.230 0.770 34 H 0.120 0.880 35 H 0.104 0.896 36 H 0.172 0.828 Dipole moment (debyes) X Y Z Total from point charges 0.226 -2.799 0.100 2.810 hybrid contribution -0.006 -1.412 -0.595 1.532 sum 0.220 -4.211 -0.495 4.246 Atomic orbital electron populations 1.86489 1.17332 1.81684 1.49284 1.24781 0.85012 1.09686 0.96904 0.94879 0.81220 0.78142 0.87573 1.21001 1.06934 0.96119 1.00052 1.21185 0.93032 0.93432 0.95327 1.21432 1.06812 1.01288 0.96974 1.18328 0.89302 0.88524 0.86519 1.44272 1.61058 1.08814 1.21278 1.21848 1.01374 0.81719 0.95434 1.22006 0.97452 0.89768 0.84409 1.92895 1.93350 1.71369 1.58580 1.23556 0.97591 0.93717 1.03127 1.22507 0.94102 0.94948 1.01158 0.87638 1.22134 0.84081 0.96897 0.96094 1.86496 1.27322 1.48324 1.75712 1.23698 0.94026 0.99268 1.01325 1.67121 1.25614 1.08993 1.23668 1.22205 0.91363 0.98726 0.87601 0.77410 0.87089 1.18057 1.17793 0.84629 0.84986 0.75365 0.90456 0.89761 0.89100 0.87644 0.93138 0.93272 0.77040 0.88008 0.89602 0.82768 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.15 12.84 -35.23 -0.45 -0.60 16 2 C -0.05 0.01 2.82 36.01 0.10 0.11 16 3 Si 0.68 -0.56 29.83 -169.99 -5.07 -5.64 16 4 C -0.24 -0.15 5.36 -104.46 -0.56 -0.71 16 5 C 0.00 0.00 9.83 -39.32 -0.39 -0.39 16 6 C -0.24 -0.12 9.33 -39.22 -0.37 -0.49 16 7 C 0.41 0.78 7.65 -155.00 -1.19 -0.41 16 8 N -0.72 -0.26 5.64 -60.42 -0.34 -0.60 16 9 C 0.12 -0.25 4.58 -4.04 -0.02 -0.27 16 10 C 0.08 -0.13 1.67 -89.80 -0.15 -0.28 16 11 F -0.18 -0.28 16.80 2.25 0.04 -0.24 16 12 C -0.14 0.43 7.10 -25.92 -0.18 0.24 16 13 C -0.11 0.16 3.99 -89.83 -0.36 -0.20 16 14 H 0.11 0.02 8.14 -51.93 -0.42 -0.40 16 15 C 0.09 -0.17 6.88 37.15 0.26 0.08 16 16 O -0.57 0.06 13.66 -35.23 -0.48 -0.43 16 17 C -0.15 0.23 7.08 -25.93 -0.18 0.05 16 18 N -0.54 -1.64 10.39 -12.43 -0.13 -1.77 16 19 C 0.16 0.20 9.84 -17.57 -0.17 0.03 16 20 H 0.38 -1.27 8.70 45.56 0.40 -0.88 16 21 H 0.11 0.01 7.96 -51.93 -0.41 -0.40 16 22 H -0.26 -0.41 7.11 56.52 0.40 -0.01 16 23 H -0.25 -0.59 7.11 56.52 0.40 -0.19 16 24 H 0.14 -0.09 8.06 -52.49 -0.42 -0.52 16 25 H 0.13 -0.22 6.71 -52.49 -0.35 -0.57 16 26 H 0.41 0.37 8.31 -40.82 -0.34 0.03 16 27 H 0.08 -0.19 7.93 -51.93 -0.41 -0.61 16 28 H 0.08 -0.31 7.73 -51.93 -0.40 -0.71 16 29 H 0.09 -0.25 8.14 -51.93 -0.42 -0.68 16 30 H 0.11 -0.53 8.06 -51.93 -0.42 -0.95 16 31 H 0.05 -0.15 8.14 -51.93 -0.42 -0.57 16 32 H 0.05 -0.16 7.84 -51.93 -0.41 -0.57 16 33 H 0.38 -1.63 9.12 45.56 0.42 -1.21 16 34 H 0.10 -0.27 7.71 -51.93 -0.40 -0.67 16 35 H 0.09 -0.03 8.14 -51.93 -0.42 -0.45 16 36 H 0.16 -0.14 4.91 -52.48 -0.26 -0.40 16 LS Contribution 305.09 15.07 4.60 4.60 Total: 0.00 -7.71 305.09 -8.95 -16.66 By element: Atomic # 1 Polarization: -5.85 SS G_CDS: -3.90 Total: -9.75 kcal Atomic # 6 Polarization: 0.98 SS G_CDS: -3.21 Total: -2.23 kcal Atomic # 7 Polarization: -1.90 SS G_CDS: -0.47 Total: -2.37 kcal Atomic # 8 Polarization: -0.10 SS G_CDS: -0.93 Total: -1.03 kcal Atomic # 9 Polarization: -0.28 SS G_CDS: 0.04 Total: -0.24 kcal Atomic # 14 Polarization: -0.56 SS G_CDS: -5.07 Total: -5.64 kcal Total LS contribution 4.60 Total: 4.60 kcal Total: -7.71 -8.95 -16.66 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_16500594_13915762.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -41.988 kcal (2) G-P(sol) polarization free energy of solvation -7.713 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -49.701 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.948 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.661 kcal (6) G-S(sol) free energy of system = (1) + (5) -58.649 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.52 seconds