Wall clock time and date at job start Mon Mar 8 2021 06:27:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86301 * 109.47440 * 2 1 4 4 C 1.50706 * 109.46938 * 120.00218 * 2 1 3 5 5 C 1.38833 * 120.33551 * 64.72243 * 4 2 1 6 6 C 1.38347 * 118.50392 * 179.73650 * 5 4 2 7 7 C 1.39097 * 119.09627 * 0.51490 * 6 5 4 8 8 N 1.39008 * 119.70499 * 179.72284 * 7 6 5 9 9 C 1.46505 * 119.99845 * 0.02562 * 8 7 6 10 10 C 1.52999 * 109.46737 * 179.97438 * 9 8 7 11 11 F 1.39893 * 112.85363 * 48.79875 * 10 9 8 12 12 C 1.53784 * 113.61230 * 180.02562 * 10 9 8 13 13 C 1.53775 * 87.08324 * 139.97671 * 12 10 9 14 14 H 1.09005 * 113.61723 * 89.19672 * 13 12 10 15 15 C 1.52993 * 113.61870 * 220.01707 * 13 12 10 16 16 O 1.42898 * 109.47527 * 185.00160 * 15 13 12 17 17 C 1.53784 * 113.61092 * 277.49529 * 10 9 8 18 18 N 1.32429 * 120.58915 * 359.74660 * 7 6 5 19 19 C 1.31935 * 121.62214 * 0.02562 * 18 7 6 20 20 H 0.96696 * 114.00485 * 300.00541 * 1 2 3 21 21 H 1.09001 * 109.47268 * 239.99988 * 2 1 3 22 22 H 1.48501 * 110.00188 * 178.67968 * 3 2 1 23 23 H 1.48498 * 109.99815 * 299.99572 * 3 2 1 24 24 H 1.07998 * 120.75295 * 359.97438 * 5 4 2 25 25 H 1.07997 * 120.45388 * 180.25835 * 6 5 4 26 26 H 0.97001 * 120.00020 * 180.02562 * 8 7 6 27 27 H 1.09000 * 109.46680 * 299.99637 * 9 8 7 28 28 H 1.08998 * 109.47192 * 59.99650 * 9 8 7 29 29 H 1.08996 * 113.61232 * 254.52923 * 12 10 9 30 30 H 1.09001 * 113.61313 * 25.42498 * 12 10 9 31 31 H 1.08997 * 109.47121 * 305.00410 * 15 13 12 32 32 H 1.09004 * 109.47208 * 64.99780 * 15 13 12 33 33 H 0.96707 * 114.00294 * 179.97438 * 16 15 13 34 34 H 1.08994 * 113.61452 * 334.56530 * 17 10 9 35 35 H 1.08998 * 113.61566 * 105.47944 * 17 10 9 36 36 H 1.08010 * 119.57233 * 180.02562 * 19 18 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 1.2305 5 6 1.6826 -2.0647 1.4089 6 6 2.1660 -2.6800 2.5498 7 6 2.8715 -1.9230 3.4794 8 7 3.3579 -2.5272 4.6329 9 6 3.1272 -3.9552 4.8650 10 6 3.7614 -4.3645 6.1958 11 9 3.4243 -3.5038 7.2458 12 6 3.5755 -5.8530 6.5348 13 6 5.0231 -5.8349 7.0533 14 1 5.1063 -5.5679 8.1068 15 6 5.8185 -7.0915 6.6943 16 8 7.1048 -7.0344 7.3140 17 6 5.2679 -4.6570 6.0960 18 7 3.0834 -0.6318 3.2754 19 6 2.6381 -0.0199 2.1947 20 1 -0.3934 0.4417 0.7649 21 1 1.7923 -0.5138 -0.8900 22 1 3.5346 1.7702 0.0322 23 1 1.5616 2.4678 -1.2085 24 1 1.1276 -2.6260 0.6719 25 1 1.9944 -3.7328 2.7184 26 1 3.8501 -2.0032 5.2842 27 1 2.0551 -4.1493 4.8981 28 1 3.5760 -4.5319 4.0563 29 1 2.8349 -6.0341 7.3137 30 1 3.4333 -6.4858 5.6588 31 1 5.2838 -7.9732 7.0476 32 1 5.9386 -7.1489 5.6124 33 1 7.6647 -7.8010 7.1296 34 1 5.5882 -4.9631 5.1002 35 1 5.8941 -3.8724 6.5207 36 1 2.8303 1.0346 2.0618 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_27_16500594_13915762.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:27:06 Heat of formation + Delta-G solvation = -60.221144 kcal Electronic energy + Delta-G solvation = -20190.130770 eV Core-core repulsion = 16784.210827 eV Total energy + Delta-G solvation = -3405.919943 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 269.121 amu Computer time = 0.58 seconds Orbital eigenvalues (eV) -48.87611 -41.40059 -39.93596 -38.11038 -37.26762 -36.29674 -33.49586 -31.93243 -29.83574 -27.41489 -27.01418 -25.66957 -24.80828 -22.72175 -21.95187 -20.73136 -18.84410 -18.53471 -18.27497 -17.69670 -16.99865 -16.72129 -16.49552 -16.48633 -16.05127 -15.86860 -15.44574 -15.41614 -15.05050 -14.81304 -14.33934 -14.22997 -14.02923 -13.78874 -13.46473 -13.35548 -13.22420 -12.40605 -12.35069 -12.14358 -11.87992 -11.46360 -11.40918 -11.14553 -10.82502 -10.75921 -10.43971 -10.38539 -8.74980 -4.98913 0.21740 0.38958 1.34291 1.64050 1.96999 1.98418 2.82150 3.03853 3.11919 3.18961 3.34987 3.52323 3.56189 3.62699 3.78735 3.81483 4.00553 4.10607 4.23440 4.33775 4.35173 4.43842 4.49517 4.53828 4.59316 4.62112 4.71185 4.74951 4.84215 4.91232 4.98222 4.99245 5.27782 5.35466 5.48897 5.94521 6.42304 6.79870 6.88194 7.10900 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.556 6.556 2 C -0.051 4.051 3 Si 0.761 3.239 4 C -0.237 4.237 5 C -0.011 4.011 6 C -0.239 4.239 7 C 0.393 3.607 8 N -0.724 5.724 9 C 0.122 3.878 10 C 0.076 3.924 11 F -0.204 7.204 12 C -0.128 4.128 13 C -0.116 4.116 14 H 0.080 0.920 15 C 0.084 3.916 16 O -0.601 6.601 17 C -0.144 4.144 18 N -0.568 5.568 19 C 0.147 3.853 20 H 0.394 0.606 21 H 0.109 0.891 22 H -0.289 1.289 23 H -0.296 1.296 24 H 0.149 0.851 25 H 0.155 0.845 26 H 0.404 0.596 27 H 0.086 0.914 28 H 0.107 0.893 29 H 0.088 0.912 30 H 0.135 0.865 31 H 0.061 0.939 32 H 0.067 0.933 33 H 0.397 0.603 34 H 0.118 0.882 35 H 0.065 0.935 36 H 0.168 0.832 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.161 -5.203 -0.501 5.354 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.364 6.364 2 C -0.163 4.163 3 Si 0.667 3.333 4 C -0.242 4.242 5 C -0.036 4.036 6 C -0.264 4.264 7 C 0.158 3.842 8 N -0.356 5.356 9 C -0.002 4.002 10 C 0.058 3.942 11 F -0.185 7.185 12 C -0.165 4.165 13 C -0.135 4.135 14 H 0.098 0.902 15 C 0.006 3.994 16 O -0.410 6.410 17 C -0.182 4.182 18 N -0.285 5.285 19 C -0.010 4.010 20 H 0.244 0.756 21 H 0.127 0.873 22 H -0.216 1.216 23 H -0.224 1.224 24 H 0.166 0.834 25 H 0.172 0.828 26 H 0.239 0.761 27 H 0.104 0.896 28 H 0.124 0.876 29 H 0.107 0.893 30 H 0.153 0.847 31 H 0.079 0.921 32 H 0.085 0.915 33 H 0.247 0.753 34 H 0.136 0.864 35 H 0.084 0.916 36 H 0.184 0.816 Dipole moment (debyes) X Y Z Total from point charges -0.423 -4.099 -0.558 4.158 hybrid contribution 0.222 -1.012 -0.383 1.104 sum -0.201 -5.111 -0.941 5.201 Atomic orbital electron populations 1.86452 1.17355 1.82090 1.50473 1.24807 0.85049 1.09898 0.96530 0.93891 0.77969 0.76146 0.85249 1.21060 1.06747 0.96407 0.99990 1.21425 0.93016 0.93518 0.95671 1.21656 1.06046 1.02275 0.96415 1.18605 0.89848 0.88530 0.87260 1.44425 1.60745 1.09712 1.20732 1.22018 1.02027 0.80631 0.95552 1.22212 0.97514 0.90387 0.84114 1.92848 1.93522 1.72300 1.59790 1.23558 0.96196 0.92735 1.04051 1.22494 0.95687 0.95495 0.99806 0.90197 1.22248 0.83361 0.96723 0.97043 1.86453 1.28447 1.49717 1.76376 1.23721 0.93806 0.98690 1.01971 1.67109 1.26753 1.10003 1.24658 1.22451 0.91554 0.99466 0.87534 0.75621 0.87340 1.21592 1.22351 0.83372 0.82755 0.76111 0.89633 0.87554 0.89305 0.84735 0.92115 0.91466 0.75276 0.86390 0.91623 0.81555 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 0.06 12.84 -148.98 -1.91 -1.86 16 2 C -0.05 0.03 2.82 71.24 0.20 0.23 16 3 Si 0.76 -0.97 29.83 68.60 2.05 1.07 16 4 C -0.24 -0.23 5.36 -19.76 -0.11 -0.34 16 5 C -0.01 0.00 9.83 22.44 0.22 0.22 16 6 C -0.24 0.00 9.33 22.50 0.21 0.21 16 7 C 0.39 1.48 7.65 133.04 1.02 2.50 16 8 N -0.72 -0.61 5.64 -345.07 -1.95 -2.56 16 9 C 0.12 -0.64 4.58 86.38 0.40 -0.24 16 10 C 0.08 -0.24 1.67 -10.27 -0.02 -0.26 16 11 F -0.20 -0.88 16.80 44.97 0.76 -0.12 16 12 C -0.13 0.90 7.10 31.12 0.22 1.12 16 13 C -0.12 0.31 3.99 -10.28 -0.04 0.27 16 14 H 0.08 0.18 8.14 -2.38 -0.02 0.16 16 15 C 0.08 -0.39 6.88 71.98 0.50 0.10 16 16 O -0.60 0.01 13.66 -148.98 -2.03 -2.02 16 17 C -0.14 0.42 7.08 31.11 0.22 0.64 16 18 N -0.57 -3.81 10.39 -193.25 -2.01 -5.82 16 19 C 0.15 0.43 9.84 84.64 0.83 1.26 16 20 H 0.39 -2.97 8.70 -74.06 -0.64 -3.61 16 21 H 0.11 0.00 7.96 -2.39 -0.02 -0.02 16 22 H -0.29 -1.20 7.11 99.48 0.71 -0.49 16 23 H -0.30 -1.73 7.11 99.48 0.71 -1.02 16 24 H 0.15 -0.40 8.06 -2.91 -0.02 -0.43 16 25 H 0.15 -0.83 6.71 -2.91 -0.02 -0.85 16 26 H 0.40 1.19 8.31 -92.71 -0.77 0.42 16 27 H 0.09 -0.57 7.93 -2.39 -0.02 -0.58 16 28 H 0.11 -1.02 7.73 -2.39 -0.02 -1.04 16 29 H 0.09 -0.55 8.14 -2.39 -0.02 -0.57 16 30 H 0.13 -1.73 8.06 -2.39 -0.02 -1.75 16 31 H 0.06 -0.42 8.14 -2.39 -0.02 -0.44 16 32 H 0.07 -0.56 7.84 -2.39 -0.02 -0.58 16 33 H 0.40 -3.40 9.12 -74.05 -0.68 -4.08 16 34 H 0.12 -0.75 7.71 -2.39 -0.02 -0.77 16 35 H 0.06 0.08 8.14 -2.39 -0.02 0.06 16 36 H 0.17 -0.23 4.91 -2.91 -0.01 -0.24 16 Total: 0.00 -19.08 305.09 -2.37 -21.45 By element: Atomic # 1 Polarization: -14.92 SS G_CDS: -0.92 Total: -15.84 kcal Atomic # 6 Polarization: 2.05 SS G_CDS: 3.65 Total: 5.70 kcal Atomic # 7 Polarization: -4.43 SS G_CDS: -3.95 Total: -8.38 kcal Atomic # 8 Polarization: 0.07 SS G_CDS: -3.95 Total: -3.88 kcal Atomic # 9 Polarization: -0.88 SS G_CDS: 0.76 Total: -0.12 kcal Atomic # 14 Polarization: -0.97 SS G_CDS: 2.05 Total: 1.07 kcal Total: -19.08 -2.37 -21.45 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_16500594_13915762.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -38.768 kcal (2) G-P(sol) polarization free energy of solvation -19.079 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -57.847 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.374 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.453 kcal (6) G-S(sol) free energy of system = (1) + (5) -60.221 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.58 seconds