Wall clock time and date at job start Mon Mar 8 2021 06:27:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86304 * 109.47062 * 2 1 4 4 C 1.50690 * 109.47576 * 239.99688 * 2 1 3 5 5 C 1.33323 * 125.95428 * 300.02572 * 4 2 1 6 6 N 1.32126 * 114.58201 * 179.75332 * 5 4 2 7 7 C 1.29677 * 116.86389 * 0.46847 * 6 5 4 8 8 N 1.38606 * 124.95075 * 179.81900 * 7 6 5 9 9 C 1.46498 * 119.99832 * 359.69374 * 8 7 6 10 10 C 1.53006 * 109.47293 * 180.02562 * 9 8 7 11 11 F 1.39901 * 112.84568 * 314.66694 * 10 9 8 12 12 C 1.53781 * 113.61570 * 85.86417 * 10 9 8 13 13 C 1.53954 * 87.01606 * 139.95232 * 12 10 9 14 14 H 1.09006 * 113.53787 * 89.19174 * 13 12 10 15 15 C 1.53004 * 113.74142 * 220.05182 * 13 12 10 16 16 O 1.42897 * 109.47554 * 272.60254 * 15 13 12 17 17 C 1.53778 * 87.11525 * 334.63802 * 13 12 10 18 18 S 1.70970 * 110.10275 * 359.55530 * 7 6 5 19 19 H 0.96696 * 114.00139 * 300.00241 * 1 2 3 20 20 H 1.09001 * 109.46851 * 119.99150 * 2 1 3 21 21 H 1.48494 * 109.99938 * 299.99878 * 3 2 1 22 22 H 1.48502 * 109.99765 * 61.31474 * 3 2 1 23 23 H 1.08006 * 122.70901 * 0.02562 * 5 4 2 24 24 H 0.97002 * 120.00615 * 179.70370 * 8 7 6 25 25 H 1.09004 * 109.47049 * 60.00539 * 9 8 7 26 26 H 1.09000 * 109.47198 * 300.00212 * 9 8 7 27 27 H 1.08994 * 113.60887 * 254.53194 * 12 10 9 28 28 H 1.08997 * 113.61223 * 25.43567 * 12 10 9 29 29 H 1.09000 * 109.46828 * 32.60273 * 15 13 12 30 30 H 1.08998 * 109.46782 * 152.59681 * 15 13 12 31 31 H 0.96695 * 114.00234 * 179.97438 * 16 15 13 32 32 H 1.09000 * 113.61172 * 270.81328 * 17 13 12 33 33 H 1.09000 * 113.69145 * 139.92199 * 17 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 -1.2303 5 6 1.6833 -1.9787 -1.5581 6 7 2.2338 -2.3708 -2.6934 7 6 2.9430 -1.4943 -3.3341 8 7 3.5961 -1.7256 -4.5346 9 6 3.5181 -3.0439 -5.1688 10 6 4.3207 -3.0316 -6.4714 11 9 4.0764 -1.8946 -7.2492 12 6 5.8156 -3.3354 -6.2769 13 6 5.7307 -4.1727 -7.5660 14 1 5.9274 -3.5988 -8.4716 15 6 6.5259 -5.4785 -7.5058 16 8 7.8733 -5.2351 -7.9148 17 6 4.2338 -4.3483 -7.2610 18 16 2.9490 -0.0098 -2.4861 19 1 -0.3933 0.4417 0.7650 20 1 1.7923 -0.5137 0.8901 21 1 1.5615 2.4679 -1.2085 22 1 1.5878 2.4586 1.2242 23 1 1.0773 -2.6315 -0.9473 24 1 4.1050 -1.0146 -4.9548 25 1 2.4766 -3.2817 -5.3856 26 1 3.9300 -3.7958 -4.4957 27 1 6.4548 -2.4572 -6.3668 28 1 6.0287 -3.9260 -5.3859 29 1 6.5194 -5.8611 -6.4852 30 1 6.0709 -6.2119 -8.1716 31 1 8.4366 -6.0209 -7.9007 32 1 4.0137 -5.2164 -6.6395 33 1 3.5969 -4.2871 -8.1434 There are 47 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 47 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_16500594_15704118.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:27:08 Heat of formation + Delta-G solvation = -48.355236 kcal Electronic energy + Delta-G solvation = -18785.706103 eV Core-core repulsion = 15469.452952 eV Total energy + Delta-G solvation = -3316.253152 eV No. of doubly occupied orbitals = 47 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 275.078 amu Computer time = 0.43 seconds Orbital eigenvalues (eV) -48.87910 -40.66269 -39.97485 -38.06452 -37.37259 -36.36188 -31.81998 -30.20548 -27.59069 -27.17918 -26.15480 -24.21488 -22.46621 -20.92344 -20.49208 -19.70223 -18.57711 -18.37589 -17.58115 -17.30050 -16.91668 -16.54455 -16.20067 -16.02433 -15.70963 -15.41957 -15.28432 -14.94352 -14.44046 -14.38990 -13.96123 -13.88161 -13.59910 -13.31777 -12.83941 -12.49220 -12.38176 -12.27807 -11.98474 -11.58290 -11.50157 -11.17850 -10.95751 -10.67960 -10.24843 -10.11471 -8.70335 -5.06349 -0.01469 0.09830 0.73196 1.24640 1.54420 1.91922 2.05548 2.09571 2.88343 2.98605 3.07162 3.23103 3.35063 3.39338 3.65117 3.74403 3.98673 4.14130 4.21389 4.33365 4.39855 4.41251 4.43250 4.51685 4.54260 4.71460 4.80306 4.81249 4.85599 5.09823 5.25400 5.78089 6.02300 6.41072 6.58880 7.03877 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.534 6.534 2 C -0.018 4.018 3 Si 0.650 3.350 4 C -0.261 4.261 5 C 0.118 3.882 6 N -0.550 5.550 7 C 0.323 3.677 8 N -0.691 5.691 9 C 0.130 3.870 10 C 0.079 3.921 11 F -0.184 7.184 12 C -0.145 4.145 13 C -0.109 4.109 14 H 0.105 0.895 15 C 0.086 3.914 16 O -0.573 6.573 17 C -0.141 4.141 18 S 0.102 5.898 19 H 0.381 0.619 20 H 0.084 0.916 21 H -0.239 1.239 22 H -0.241 1.241 23 H 0.176 0.824 24 H 0.418 0.582 25 H 0.080 0.920 26 H 0.089 0.911 27 H 0.085 0.915 28 H 0.103 0.897 29 H 0.050 0.950 30 H 0.050 0.950 31 H 0.382 0.618 32 H 0.106 0.894 33 H 0.090 0.910 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.167 -2.283 1.653 4.240 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.342 6.342 2 C -0.131 4.131 3 Si 0.549 3.451 4 C -0.383 4.383 5 C -0.033 4.033 6 N -0.276 5.276 7 C -0.047 4.047 8 N -0.332 5.332 9 C 0.004 3.996 10 C 0.060 3.940 11 F -0.164 7.164 12 C -0.183 4.183 13 C -0.127 4.127 14 H 0.123 0.877 15 C 0.008 3.992 16 O -0.379 6.379 17 C -0.179 4.179 18 S 0.351 5.649 19 H 0.229 0.771 20 H 0.102 0.898 21 H -0.163 1.163 22 H -0.164 1.164 23 H 0.193 0.807 24 H 0.256 0.744 25 H 0.098 0.902 26 H 0.107 0.893 27 H 0.104 0.896 28 H 0.121 0.879 29 H 0.068 0.932 30 H 0.069 0.931 31 H 0.229 0.771 32 H 0.124 0.876 33 H 0.109 0.891 Dipole moment (debyes) X Y Z Total from point charges 3.181 -0.829 0.536 3.331 hybrid contribution -1.298 -0.946 0.804 1.796 sum 1.883 -1.776 1.340 2.914 Atomic orbital electron populations 1.86614 1.17728 1.79966 1.49887 1.23697 0.84106 1.09730 0.95534 0.95256 0.91689 0.75468 0.82681 1.24330 1.12622 0.97942 1.03427 1.21278 0.97058 0.93289 0.91646 1.66475 1.16994 1.33761 1.10385 1.23643 0.95254 0.93695 0.92119 1.43768 1.55174 1.14577 1.19681 1.21831 1.01313 0.85116 0.91383 1.22117 0.97520 0.84332 0.90011 1.92880 1.95314 1.52093 1.76149 1.23749 0.93880 1.01644 0.99031 1.22540 0.93994 0.96720 0.99434 0.87712 1.22135 0.82601 0.95995 0.98489 1.86487 1.21689 1.39022 1.90688 1.23544 0.96791 0.96371 1.01212 1.83966 1.50900 1.13148 1.16923 0.77078 0.89797 1.16279 1.16448 0.80744 0.74394 0.90151 0.89279 0.89629 0.87897 0.93196 0.93141 0.77059 0.87560 0.89149 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.70 12.84 -35.23 -0.45 -1.15 16 2 C -0.02 -0.01 2.98 36.00 0.11 0.10 16 3 Si 0.65 -0.18 31.05 -169.99 -5.28 -5.45 16 4 C -0.26 -0.55 5.78 -36.03 -0.21 -0.76 16 5 C 0.12 0.35 11.22 -19.14 -0.21 0.13 16 6 N -0.55 -2.07 10.14 -15.21 -0.15 -2.22 16 7 C 0.32 0.75 8.09 -87.69 -0.71 0.04 16 8 N -0.69 -0.28 5.61 -62.30 -0.35 -0.63 16 9 C 0.13 -0.08 5.68 -4.04 -0.02 -0.10 16 10 C 0.08 -0.09 1.71 -89.80 -0.15 -0.24 16 11 F -0.18 -0.26 16.64 2.25 0.04 -0.22 16 12 C -0.15 0.23 7.10 -25.83 -0.18 0.05 16 13 C -0.11 0.13 3.98 -89.72 -0.36 -0.23 16 14 H 0.10 0.03 8.14 -51.93 -0.42 -0.39 16 15 C 0.09 -0.15 6.89 37.16 0.26 0.11 16 16 O -0.57 0.02 13.66 -35.23 -0.48 -0.46 16 17 C -0.14 0.32 7.10 -25.92 -0.18 0.14 16 18 S 0.10 0.14 20.57 -107.50 -2.21 -2.08 16 19 H 0.38 -1.11 8.74 45.56 0.40 -0.71 16 20 H 0.08 -0.15 7.96 -51.93 -0.41 -0.56 16 21 H -0.24 -0.71 7.11 56.52 0.40 -0.31 16 22 H -0.24 -0.23 7.11 56.52 0.40 0.17 16 23 H 0.18 0.26 8.06 -52.48 -0.42 -0.17 16 24 H 0.42 -0.34 8.20 -40.82 -0.33 -0.68 16 25 H 0.08 0.02 8.14 -51.93 -0.42 -0.40 16 26 H 0.09 -0.11 7.87 -51.93 -0.41 -0.51 16 27 H 0.08 -0.07 8.14 -51.93 -0.42 -0.50 16 28 H 0.10 -0.26 7.68 -51.93 -0.40 -0.66 16 29 H 0.05 -0.15 7.86 -51.93 -0.41 -0.56 16 30 H 0.05 -0.13 8.14 -51.93 -0.42 -0.55 16 31 H 0.38 -1.60 9.12 45.56 0.42 -1.18 16 32 H 0.11 -0.41 8.06 -51.93 -0.42 -0.83 16 33 H 0.09 -0.19 8.14 -51.93 -0.42 -0.61 16 LS Contribution 299.53 15.07 4.51 4.51 Total: 0.00 -7.57 299.53 -9.35 -16.92 By element: Atomic # 1 Polarization: -5.15 SS G_CDS: -3.30 Total: -8.45 kcal Atomic # 6 Polarization: 0.91 SS G_CDS: -1.67 Total: -0.77 kcal Atomic # 7 Polarization: -2.34 SS G_CDS: -0.50 Total: -2.85 kcal Atomic # 8 Polarization: -0.68 SS G_CDS: -0.93 Total: -1.62 kcal Atomic # 9 Polarization: -0.26 SS G_CDS: 0.04 Total: -0.22 kcal Atomic # 14 Polarization: -0.18 SS G_CDS: -5.28 Total: -5.45 kcal Atomic # 16 Polarization: 0.14 SS G_CDS: -2.21 Total: -2.08 kcal Total LS contribution 4.51 Total: 4.51 kcal Total: -7.57 -9.35 -16.92 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_16500594_15704118.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -31.437 kcal (2) G-P(sol) polarization free energy of solvation -7.569 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -39.006 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.349 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.918 kcal (6) G-S(sol) free energy of system = (1) + (5) -48.355 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.43 seconds