Wall clock time and date at job start Mon Mar 8 2021 06:27:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.33333 * 125.94953 * 2 1 4 4 C 1.50694 * 122.70711 * 359.97438 * 3 2 1 5 5 O 1.42892 * 109.47399 * 329.99441 * 4 3 2 6 6 Si 1.86308 * 109.46696 * 209.99410 * 4 3 2 7 7 N 1.32117 * 114.57623 * 180.02562 * 3 2 1 8 8 C 1.29688 * 116.86910 * 359.97438 * 7 3 2 9 9 N 1.38616 * 124.94753 * 179.97438 * 8 7 3 10 10 C 1.46500 * 119.99760 * 180.02562 * 9 8 7 11 11 C 1.52997 * 109.46929 * 180.02562 * 10 9 8 12 12 F 1.39893 * 112.91079 * 48.74839 * 11 10 9 13 13 C 1.53787 * 113.61251 * 180.02562 * 11 10 9 14 14 C 1.53779 * 87.07963 * 139.97890 * 13 11 10 15 15 H 1.09001 * 113.61377 * 89.20020 * 14 13 11 16 16 C 1.52998 * 113.61250 * 220.01477 * 14 13 11 17 17 O 1.42900 * 109.47401 * 185.00015 * 16 14 13 18 18 C 1.53779 * 87.08402 * 334.56577 * 14 13 11 19 19 S 1.70959 * 110.09995 * 0.24446 * 8 7 3 20 20 H 1.09005 * 109.46972 * 90.00252 * 1 2 3 21 21 H 1.09006 * 109.47008 * 209.99548 * 1 2 3 22 22 H 1.08999 * 109.47335 * 329.99758 * 1 2 3 23 23 H 1.08994 * 109.47438 * 89.99787 * 4 3 2 24 24 H 0.96705 * 114.00129 * 180.02562 * 5 4 3 25 25 H 1.48494 * 110.00053 * 298.68321 * 6 4 3 26 26 H 1.48499 * 110.00099 * 60.00267 * 6 4 3 27 27 H 0.96997 * 119.99861 * 0.02562 * 9 8 7 28 28 H 1.08999 * 109.46930 * 59.99915 * 10 9 8 29 29 H 1.09003 * 109.46934 * 300.00189 * 10 9 8 30 30 H 1.08997 * 113.61028 * 254.52850 * 13 11 10 31 31 H 1.09000 * 113.61529 * 25.42990 * 13 11 10 32 32 H 1.09007 * 109.47269 * 305.00322 * 16 14 13 33 33 H 1.08998 * 109.47235 * 64.99931 * 16 14 13 34 34 H 0.96697 * 114.00419 * 180.02562 * 17 16 14 35 35 H 1.09002 * 113.61557 * 270.88569 * 18 14 13 36 36 H 1.09004 * 113.61501 * 139.97990 * 18 14 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2898 1.0794 0.0000 4 6 1.7413 2.4830 -0.0006 5 8 0.4816 2.5019 -0.6747 6 14 2.9326 3.6147 -0.8786 7 7 3.5850 0.8188 -0.0005 8 6 3.9315 -0.4309 -0.0005 9 7 5.2385 -0.8925 -0.0015 10 6 5.5067 -2.3328 -0.0019 11 6 7.0181 -2.5701 -0.0024 12 9 7.6882 -1.8154 0.9664 13 6 7.4081 -4.0577 -0.0034 14 6 8.5257 -3.6830 -0.9910 15 1 9.4603 -3.4010 -0.5063 16 6 8.7226 -4.7068 -2.1108 17 8 9.8508 -4.3337 -2.9044 18 6 7.6548 -2.4832 -1.3995 19 16 2.5414 -1.4260 -0.0065 20 1 -0.3633 0.0000 -1.0277 21 1 -0.3633 -0.8901 0.5138 22 1 -0.3634 0.8899 0.5139 23 1 1.6087 2.8217 1.0269 24 1 0.0693 3.3758 -0.7136 25 1 4.2369 3.6285 -0.1689 26 1 3.1221 3.1637 -2.2807 27 1 5.9756 -0.2619 -0.0019 28 1 5.0673 -2.7839 -0.8916 29 1 5.0686 -2.7841 0.8884 30 1 7.7767 -4.4130 0.9588 31 1 6.6462 -4.7085 -0.4325 32 1 8.8936 -5.6919 -1.6765 33 1 7.8312 -4.7359 -2.7375 34 1 10.0352 -4.9393 -3.6354 35 1 6.9604 -2.7036 -2.2103 36 1 8.2227 -1.5675 -1.5643 There are 50 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 50 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_27_16500594_15704122.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:27:10 Heat of formation + Delta-G solvation = -54.872784 kcal Electronic energy + Delta-G solvation = -20823.955789 eV Core-core repulsion = 17351.882397 eV Total energy + Delta-G solvation = -3472.073393 eV No. of doubly occupied orbitals = 50 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 289.093 amu Computer time = 0.60 seconds Orbital eigenvalues (eV) -49.00452 -41.16107 -40.05220 -38.05438 -37.32051 -36.49269 -33.08736 -30.55544 -29.12135 -27.24948 -26.91732 -25.63459 -24.22188 -22.55255 -20.88103 -20.41426 -19.42568 -18.36289 -18.18276 -17.60158 -17.36163 -16.96374 -16.68078 -16.25900 -16.19031 -15.67032 -15.56495 -15.31789 -14.99321 -14.64365 -14.32119 -14.03808 -13.96996 -13.75683 -13.54815 -13.45280 -13.30887 -12.93329 -12.47869 -12.39234 -11.95937 -11.89564 -11.54155 -11.53347 -11.19978 -10.86662 -10.83212 -10.41159 -10.10330 -8.78493 -4.99555 -0.15124 -0.01916 0.59575 1.24541 1.61761 1.70831 1.73738 2.18656 2.91878 2.99034 2.99321 3.13349 3.24625 3.43281 3.72493 3.93998 4.05634 4.08379 4.21265 4.28457 4.29809 4.39489 4.40888 4.51439 4.54500 4.64304 4.75500 4.78387 4.81363 4.85276 4.90392 5.03111 5.26727 5.31350 5.38592 6.00992 6.71444 6.85016 6.93739 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.053 4.053 2 C -0.241 4.241 3 C 0.071 3.929 4 C -0.033 4.033 5 O -0.550 6.550 6 Si 0.809 3.191 7 N -0.587 5.587 8 C 0.302 3.698 9 N -0.694 5.694 10 C 0.114 3.886 11 C 0.078 3.922 12 F -0.202 7.202 13 C -0.125 4.125 14 C -0.114 4.114 15 H 0.082 0.918 16 C 0.084 3.916 17 O -0.601 6.601 18 C -0.147 4.147 19 S 0.141 5.859 20 H 0.072 0.928 21 H 0.067 0.933 22 H 0.094 0.906 23 H 0.101 0.899 24 H 0.408 0.592 25 H -0.308 1.308 26 H -0.322 1.322 27 H 0.410 0.590 28 H 0.110 0.890 29 H 0.090 0.910 30 H 0.093 0.907 31 H 0.136 0.864 32 H 0.063 0.937 33 H 0.067 0.933 34 H 0.398 0.602 35 H 0.118 0.882 36 H 0.066 0.934 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.963 -3.608 -0.808 5.420 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.112 4.112 2 C -0.363 4.363 3 C -0.057 4.057 4 C -0.145 4.145 5 O -0.360 6.360 6 Si 0.718 3.282 7 N -0.316 5.316 8 C -0.068 4.068 9 N -0.334 5.334 10 C -0.010 4.010 11 C 0.059 3.941 12 F -0.182 7.182 13 C -0.163 4.163 14 C -0.132 4.132 15 H 0.101 0.899 16 C 0.006 3.994 17 O -0.410 6.410 18 C -0.184 4.184 19 S 0.390 5.610 20 H 0.091 0.909 21 H 0.086 0.914 22 H 0.113 0.887 23 H 0.119 0.881 24 H 0.260 0.740 25 H -0.236 1.236 26 H -0.252 1.252 27 H 0.247 0.753 28 H 0.128 0.872 29 H 0.108 0.892 30 H 0.111 0.889 31 H 0.154 0.846 32 H 0.081 0.919 33 H 0.085 0.915 34 H 0.248 0.752 35 H 0.137 0.863 36 H 0.085 0.915 Dipole moment (debyes) X Y Z Total from point charges -2.779 -4.557 -0.831 5.402 hybrid contribution 0.714 0.334 -0.031 0.789 sum -2.065 -4.222 -0.862 4.779 Atomic orbital electron populations 1.20143 0.84695 1.03351 1.03005 1.25553 1.02720 0.92584 1.15491 1.19444 0.86314 0.96862 1.03105 1.23913 0.93588 0.94425 1.02590 1.86415 1.32820 1.37946 1.78837 0.95423 0.76190 0.82696 0.73910 1.65742 1.18349 1.18299 1.29242 1.23471 0.92746 0.91638 0.98991 1.43897 1.01427 1.07828 1.80292 1.22217 0.94472 0.79152 1.05129 1.22171 0.89552 0.94028 0.88335 1.92858 1.81990 1.78085 1.65293 1.23569 0.98671 0.92798 1.01276 1.22483 0.98062 0.96044 0.96626 0.89946 1.22243 0.88710 0.96712 0.91707 1.86449 1.50478 1.56387 1.47666 1.23765 0.99380 0.99840 0.95435 1.83578 0.94803 1.09250 1.73401 0.90930 0.91372 0.88732 0.88103 0.73951 1.23641 1.25177 0.75261 0.87232 0.89157 0.88881 0.84589 0.91874 0.91483 0.75226 0.86349 0.91539 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.05 -0.10 8.96 71.24 0.64 0.53 16 2 C -0.24 -1.70 6.50 24.58 0.16 -1.54 16 3 C 0.07 0.71 5.95 41.40 0.25 0.96 16 4 C -0.03 -0.10 2.82 71.23 0.20 0.10 16 5 O -0.55 0.56 9.86 -148.98 -1.47 -0.91 16 6 Si 0.81 3.72 32.08 68.60 2.20 5.92 16 7 N -0.59 -7.74 8.94 -189.86 -1.70 -9.44 16 8 C 0.30 2.56 8.24 179.32 1.48 4.04 16 9 N -0.69 -2.99 5.62 -351.01 -1.97 -4.97 16 10 C 0.11 -0.31 5.22 86.38 0.45 0.14 16 11 C 0.08 -0.14 1.67 -10.27 -0.02 -0.16 16 12 F -0.20 -1.09 16.80 44.97 0.76 -0.34 16 13 C -0.13 0.80 7.10 31.12 0.22 1.02 16 14 C -0.11 0.24 3.99 -10.27 -0.04 0.20 16 15 H 0.08 0.21 8.14 -2.39 -0.02 0.19 16 16 C 0.08 -0.36 6.88 71.98 0.50 0.13 16 17 O -0.60 -0.23 13.66 -148.98 -2.03 -2.27 16 18 C -0.15 0.25 7.08 31.12 0.22 0.47 16 19 S 0.14 0.56 22.32 -56.49 -1.26 -0.70 16 20 H 0.07 0.16 8.14 -2.38 -0.02 0.14 16 21 H 0.07 -0.03 8.14 -2.38 -0.02 -0.05 16 22 H 0.09 0.07 6.62 -2.39 -0.02 0.06 16 23 H 0.10 -0.09 7.96 -2.39 -0.02 -0.10 16 24 H 0.41 -4.89 8.74 -74.05 -0.65 -5.54 16 25 H -0.31 -4.19 7.11 99.48 0.71 -3.49 16 26 H -0.32 -4.59 7.11 99.48 0.71 -3.88 16 27 H 0.41 2.51 8.31 -92.71 -0.77 1.73 16 28 H 0.11 -0.76 7.94 -2.39 -0.02 -0.77 16 29 H 0.09 -0.38 8.14 -2.39 -0.02 -0.40 16 30 H 0.09 -0.55 8.14 -2.39 -0.02 -0.57 16 31 H 0.14 -1.66 8.06 -2.39 -0.02 -1.67 16 32 H 0.06 -0.43 8.14 -2.38 -0.02 -0.45 16 33 H 0.07 -0.53 7.84 -2.39 -0.02 -0.54 16 34 H 0.40 -3.25 9.12 -74.06 -0.68 -3.92 16 35 H 0.12 -0.61 7.72 -2.39 -0.02 -0.62 16 36 H 0.07 0.15 8.14 -2.39 -0.02 0.14 16 Total: 0.00 -24.23 317.21 -2.35 -26.59 By element: Atomic # 1 Polarization: -18.85 SS G_CDS: -0.93 Total: -19.77 kcal Atomic # 6 Polarization: 1.85 SS G_CDS: 4.05 Total: 5.90 kcal Atomic # 7 Polarization: -10.74 SS G_CDS: -3.67 Total: -14.41 kcal Atomic # 8 Polarization: 0.33 SS G_CDS: -3.50 Total: -3.18 kcal Atomic # 9 Polarization: -1.09 SS G_CDS: 0.76 Total: -0.34 kcal Atomic # 14 Polarization: 3.72 SS G_CDS: 2.20 Total: 5.92 kcal Atomic # 16 Polarization: 0.56 SS G_CDS: -1.26 Total: -0.70 kcal Total: -24.23 -2.35 -26.59 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_16500594_15704122.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -28.287 kcal (2) G-P(sol) polarization free energy of solvation -24.231 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -52.518 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.355 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.585 kcal (6) G-S(sol) free energy of system = (1) + (5) -54.873 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.60 seconds