Wall clock time and date at job start Mon Mar 8 2021 06:27:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42907 * 1 3 3 Si 1.86305 * 109.46925 * 2 1 4 4 C 1.50705 * 109.47028 * 119.99511 * 2 1 3 5 5 C 1.37978 * 120.32831 * 244.99913 * 4 2 1 6 6 N 1.32007 * 120.89976 * 179.97438 * 5 4 2 7 7 C 1.32334 * 121.64956 * 0.02562 * 6 5 4 8 8 N 1.39139 * 119.72267 * 179.97438 * 7 6 5 9 9 C 1.46500 * 119.99804 * 0.02562 * 8 7 6 10 10 C 1.53004 * 109.47430 * 179.97438 * 9 8 7 11 11 F 1.39898 * 112.84658 * 48.80009 * 10 9 8 12 12 C 1.53778 * 113.61762 * 179.97438 * 10 9 8 13 13 C 1.53780 * 87.07870 * 140.06516 * 12 10 9 14 14 H 1.09002 * 113.61333 * 89.20168 * 13 12 10 15 15 C 1.53006 * 113.61448 * 220.01695 * 13 12 10 16 16 O 1.42897 * 109.47065 * 183.47447 * 15 13 12 17 17 C 1.53781 * 87.17569 * 334.61029 * 13 12 10 18 18 C 1.39342 * 120.56317 * 0.25616 * 7 6 5 19 19 F 1.35098 * 120.47733 * 179.71916 * 18 7 6 20 20 C 1.38455 * 119.05307 * 359.49438 * 18 7 6 21 21 H 0.96702 * 114.00069 * 300.00158 * 1 2 3 22 22 H 1.09000 * 109.47444 * 239.99841 * 2 1 3 23 23 H 1.48502 * 109.99773 * 178.67956 * 3 2 1 24 24 H 1.48494 * 109.99802 * 299.99712 * 3 2 1 25 25 H 1.07998 * 119.55270 * 0.02562 * 5 4 2 26 26 H 0.97003 * 120.00376 * 180.02562 * 8 7 6 27 27 H 1.09008 * 109.47193 * 59.99806 * 9 8 7 28 28 H 1.08997 * 109.47413 * 299.99962 * 9 8 7 29 29 H 1.09000 * 113.61172 * 25.51782 * 12 10 9 30 30 H 1.08995 * 113.61431 * 254.61764 * 12 10 9 31 31 H 1.09004 * 109.47052 * 303.47534 * 15 13 12 32 32 H 1.09000 * 109.46752 * 63.47591 * 15 13 12 33 33 H 0.96704 * 113.99690 * 180.02562 * 16 15 13 34 34 H 1.08994 * 113.60887 * 139.93976 * 17 13 12 35 35 H 1.08997 * 113.61223 * 270.84350 * 17 13 12 36 36 H 1.07999 * 120.75553 * 180.24380 * 20 18 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7103 1.2306 5 6 2.6382 -0.0201 2.1938 6 7 3.0830 -0.6308 3.2762 7 6 2.8720 -1.9210 3.4817 8 7 3.3595 -2.5243 4.6368 9 6 4.1023 -1.7315 5.6197 10 6 4.5218 -2.6282 6.7863 11 9 5.1254 -3.8186 6.3668 12 6 5.3124 -1.8887 7.8785 13 6 4.5173 -2.7150 8.9032 14 1 4.9867 -3.6656 9.1561 15 6 4.0910 -1.9161 10.1365 16 8 3.4329 -2.7835 11.0619 17 6 3.4158 -2.8364 7.8369 18 6 2.1709 -2.6818 2.5483 19 9 1.9614 -4.0000 2.7572 20 6 1.6878 -2.0665 1.4059 21 1 -0.3933 0.4417 0.7650 22 1 1.7925 -0.5138 -0.8899 23 1 3.5346 1.7703 0.0322 24 1 1.5615 2.4678 -1.2085 25 1 2.8294 1.0345 2.0607 26 1 3.2076 -3.4698 4.7914 27 1 3.4684 -0.9260 5.9907 28 1 4.9897 -1.3082 5.1492 29 1 5.1021 -0.8201 7.9218 30 1 6.3793 -2.1113 7.8716 31 1 4.9714 -1.4808 10.6095 32 1 3.4091 -1.1205 9.8362 33 1 3.1342 -2.3433 11.8695 34 1 2.9540 -3.8228 7.7966 35 1 2.6862 -2.0272 7.8689 36 1 1.1374 -2.6291 0.6663 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_16500594_17656566.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:27:13 Heat of formation + Delta-G solvation = -103.363400 kcal Electronic energy + Delta-G solvation = -22606.701590 eV Core-core repulsion = 18729.456883 eV Total energy + Delta-G solvation = -3877.244707 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 287.112 amu Computer time = 0.58 seconds Orbital eigenvalues (eV) -49.86313 -48.85099 -41.41737 -40.02507 -38.22384 -37.34515 -36.39106 -33.30452 -32.10019 -29.90937 -27.52959 -27.17084 -26.12821 -24.62859 -22.93581 -22.21467 -20.84002 -19.46719 -18.60210 -18.38610 -18.29937 -17.63542 -17.20144 -16.98101 -16.84194 -16.53777 -16.12343 -16.04907 -15.81559 -15.37727 -15.25508 -15.17029 -14.90941 -14.34439 -14.17264 -14.02277 -13.82210 -13.60691 -13.50355 -13.30639 -12.63587 -12.49006 -12.11661 -11.98404 -11.60830 -11.52098 -11.27159 -10.96041 -10.73060 -10.70378 -10.48103 -8.81088 -5.11186 -0.08813 0.10077 1.20665 1.57001 1.83753 1.92235 2.53300 2.86989 2.97685 3.02459 3.10179 3.18781 3.30680 3.38913 3.44465 3.56993 3.68014 3.81521 3.98635 4.13334 4.20652 4.33149 4.38126 4.39140 4.42526 4.45306 4.52426 4.54958 4.67691 4.72053 4.81691 4.86937 4.95699 5.24512 5.31108 5.84664 6.09598 6.50967 6.58490 6.89973 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.540 6.540 2 C -0.055 4.055 3 Si 0.685 3.315 4 C -0.209 4.209 5 C 0.149 3.851 6 N -0.513 5.513 7 C 0.391 3.609 8 N -0.715 5.715 9 C 0.128 3.872 10 C 0.077 3.923 11 F -0.184 7.184 12 C -0.140 4.140 13 C -0.109 4.109 14 H 0.104 0.896 15 C 0.086 3.914 16 O -0.573 6.573 17 C -0.145 4.145 18 C -0.017 4.017 19 F -0.132 7.132 20 C -0.037 4.037 21 H 0.380 0.620 22 H 0.115 0.885 23 H -0.254 1.254 24 H -0.251 1.251 25 H 0.164 0.836 26 H 0.416 0.584 27 H 0.089 0.911 28 H 0.080 0.920 29 H 0.106 0.894 30 H 0.089 0.911 31 H 0.050 0.950 32 H 0.050 0.950 33 H 0.382 0.618 34 H 0.084 0.916 35 H 0.102 0.898 36 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.554 4.968 3.505 6.106 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.345 6.345 2 C -0.167 4.167 3 Si 0.586 3.414 4 C -0.215 4.215 5 C -0.008 4.008 6 N -0.231 5.231 7 C 0.152 3.848 8 N -0.349 5.349 9 C 0.004 3.996 10 C 0.059 3.941 11 F -0.165 7.165 12 C -0.178 4.178 13 C -0.127 4.127 14 H 0.122 0.878 15 C 0.008 3.992 16 O -0.379 6.379 17 C -0.183 4.183 18 C -0.044 4.044 19 F -0.111 7.111 20 C -0.063 4.063 21 H 0.227 0.773 22 H 0.133 0.867 23 H -0.178 1.178 24 H -0.176 1.176 25 H 0.180 0.820 26 H 0.254 0.746 27 H 0.107 0.893 28 H 0.098 0.902 29 H 0.125 0.875 30 H 0.108 0.892 31 H 0.068 0.932 32 H 0.068 0.932 33 H 0.229 0.771 34 H 0.103 0.897 35 H 0.120 0.880 36 H 0.167 0.833 Dipole moment (debyes) X Y Z Total from point charges 0.738 5.316 2.823 6.064 hybrid contribution -0.448 -1.462 -0.306 1.560 sum 0.290 3.854 2.517 4.612 Atomic orbital electron populations 1.86520 1.17053 1.81676 1.49283 1.24870 0.85239 1.09934 0.96616 0.94917 0.81157 0.77552 0.87789 1.20934 1.05709 0.94650 1.00168 1.22299 0.91717 0.99196 0.87592 1.67269 1.24974 1.07267 1.23546 1.18377 0.90614 0.88983 0.86783 1.44344 1.59407 1.12368 1.18791 1.21745 0.97107 0.93268 0.87525 1.22163 0.95681 0.82867 0.93427 1.92885 1.84497 1.47749 1.91349 1.23533 1.00754 1.00630 0.92932 1.22513 0.96976 1.00440 0.92788 0.87760 1.22137 0.95779 0.91706 0.89578 1.86493 1.78973 1.39417 1.32991 1.23723 0.96480 1.04573 0.93507 1.17996 1.08538 0.79500 0.98344 1.91503 1.93680 1.31006 1.94928 1.21294 0.95501 0.94444 0.95104 0.77303 0.86720 1.17844 1.17585 0.81968 0.74606 0.89291 0.90195 0.87546 0.89194 0.93151 0.93214 0.77067 0.89722 0.87958 0.83255 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.34 12.84 -35.23 -0.45 -0.11 16 2 C -0.06 0.06 2.82 36.01 0.10 0.17 16 3 Si 0.68 -1.46 29.83 -169.99 -5.07 -6.53 16 4 C -0.21 0.07 5.36 -104.47 -0.56 -0.49 16 5 C 0.15 -0.06 9.83 -17.57 -0.17 -0.23 16 6 N -0.51 -0.69 9.57 -12.37 -0.12 -0.81 16 7 C 0.39 0.69 7.49 -154.87 -1.16 -0.47 16 8 N -0.72 -0.47 5.62 -60.34 -0.34 -0.81 16 9 C 0.13 -0.11 5.39 -4.04 -0.02 -0.14 16 10 C 0.08 -0.07 1.67 -89.72 -0.15 -0.22 16 11 F -0.18 -0.36 16.79 2.25 0.04 -0.32 16 12 C -0.14 0.33 7.10 -25.92 -0.18 0.15 16 13 C -0.11 0.12 3.98 -89.80 -0.36 -0.24 16 14 H 0.10 0.05 8.14 -51.93 -0.42 -0.37 16 15 C 0.09 -0.15 6.87 37.16 0.26 0.10 16 16 O -0.57 -0.02 13.66 -35.23 -0.48 -0.50 16 17 C -0.15 0.18 7.10 -25.83 -0.18 0.00 16 18 C -0.02 -0.03 7.35 -39.09 -0.29 -0.32 16 19 F -0.13 -0.38 16.65 2.25 0.04 -0.34 16 20 C -0.04 -0.03 9.82 -39.26 -0.39 -0.41 16 21 H 0.38 -1.70 8.70 45.56 0.40 -1.31 16 22 H 0.12 -0.09 7.96 -51.93 -0.41 -0.51 16 23 H -0.25 -0.05 7.11 56.52 0.40 0.35 16 24 H -0.25 -0.32 7.11 56.52 0.40 0.09 16 25 H 0.16 -0.48 4.91 -52.49 -0.26 -0.74 16 26 H 0.42 0.24 7.66 -40.82 -0.31 -0.07 16 27 H 0.09 -0.17 7.96 -51.92 -0.41 -0.58 16 28 H 0.08 -0.03 8.14 -51.93 -0.42 -0.45 16 29 H 0.11 -0.45 8.06 -51.93 -0.42 -0.87 16 30 H 0.09 -0.19 8.14 -51.93 -0.42 -0.62 16 31 H 0.05 -0.13 8.14 -51.93 -0.42 -0.56 16 32 H 0.05 -0.15 7.87 -51.93 -0.41 -0.56 16 33 H 0.38 -1.59 9.12 45.56 0.42 -1.17 16 34 H 0.08 -0.01 8.14 -51.93 -0.42 -0.44 16 35 H 0.10 -0.24 7.75 -51.93 -0.40 -0.64 16 36 H 0.15 -0.01 8.06 -52.49 -0.42 -0.43 16 LS Contribution 312.70 15.07 4.71 4.71 Total: 0.00 -7.36 312.70 -8.33 -15.69 By element: Atomic # 1 Polarization: -5.33 SS G_CDS: -3.55 Total: -8.88 kcal Atomic # 6 Polarization: 1.00 SS G_CDS: -3.10 Total: -2.10 kcal Atomic # 7 Polarization: -1.16 SS G_CDS: -0.46 Total: -1.62 kcal Atomic # 8 Polarization: 0.32 SS G_CDS: -0.93 Total: -0.61 kcal Atomic # 9 Polarization: -0.74 SS G_CDS: 0.08 Total: -0.66 kcal Atomic # 14 Polarization: -1.46 SS G_CDS: -5.07 Total: -6.53 kcal Total LS contribution 4.71 Total: 4.71 kcal Total: -7.36 -8.33 -15.69 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_16500594_17656566.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -87.672 kcal (2) G-P(sol) polarization free energy of solvation -7.365 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -95.036 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.327 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.692 kcal (6) G-S(sol) free energy of system = (1) + (5) -103.363 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.58 seconds