Wall clock time and date at job start Mon Mar 8 2021 06:27:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86300 * 109.46934 * 2 1 4 4 C 1.50699 * 109.47051 * 240.00154 * 2 1 3 5 5 C 1.38840 * 120.33882 * 299.99542 * 4 2 1 6 6 C 1.38334 * 118.50792 * 180.02562 * 5 4 2 7 7 C 1.39095 * 119.09969 * 0.02562 * 6 5 4 8 8 N 1.39008 * 119.70868 * 179.72112 * 7 6 5 9 9 C 1.46505 * 119.99578 * 0.02562 * 8 7 6 10 10 C 1.53002 * 109.46792 * 179.97438 * 9 8 7 11 11 F 1.39901 * 112.85072 * 316.19978 * 10 9 8 12 12 C 1.53781 * 113.61429 * 87.50590 * 10 9 8 13 13 C 1.53776 * 87.08533 * 89.11358 * 12 10 9 14 14 H 1.09005 * 113.61717 * 270.89056 * 13 12 10 15 15 C 1.52994 * 113.69321 * 139.99023 * 13 12 10 16 16 O 1.42909 * 109.46790 * 87.46980 * 15 13 12 17 17 C 1.53784 * 113.61400 * 185.00048 * 10 9 8 18 18 N 1.32431 * 120.58957 * 0.02562 * 7 6 5 19 19 C 1.31940 * 121.61846 * 0.02562 * 18 7 6 20 20 H 0.96707 * 113.99998 * 60.00389 * 1 2 3 21 21 H 1.09002 * 109.46872 * 119.99863 * 2 1 3 22 22 H 1.48494 * 110.00291 * 298.67859 * 3 2 1 23 23 H 1.48506 * 109.99693 * 60.00036 * 3 2 1 24 24 H 1.07999 * 120.74548 * 0.02562 * 5 4 2 25 25 H 1.07999 * 120.45444 * 180.02562 * 6 5 4 26 26 H 0.96998 * 120.00522 * 180.02562 * 8 7 6 27 27 H 1.08999 * 109.47017 * 299.99528 * 9 8 7 28 28 H 1.09000 * 109.47004 * 60.00439 * 9 8 7 29 29 H 1.09000 * 113.61652 * 203.66407 * 12 10 9 30 30 H 1.09005 * 113.61662 * 334.56524 * 12 10 9 31 31 H 1.09002 * 109.46981 * 207.46483 * 15 13 12 32 32 H 1.09001 * 109.47054 * 327.46885 * 15 13 12 33 33 H 0.96706 * 113.99612 * 180.02562 * 16 15 13 34 34 H 1.09003 * 113.60970 * 25.43088 * 17 10 9 35 35 H 1.08994 * 113.61189 * 156.33968 * 17 10 9 36 36 H 1.08003 * 119.56553 * 180.02562 * 19 18 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 1.6003 -2.0395 -1.4572 6 6 2.0824 -2.6546 -2.5986 7 6 2.8784 -1.9250 -3.4753 8 7 3.3745 -2.5322 -4.6232 9 6 3.0577 -3.9345 -4.9053 10 6 3.7214 -4.3529 -6.2188 11 9 3.5852 -3.3920 -7.2265 12 6 5.1604 -4.8669 -6.0456 13 6 4.5531 -6.2654 -5.8451 14 1 4.3076 -6.4901 -4.8071 15 6 5.3473 -7.3835 -6.5233 16 8 6.3664 -7.8494 -5.6363 17 6 3.3513 -5.7757 -6.6702 18 7 3.1730 -0.6587 -3.2233 19 6 2.7279 -0.0470 -2.1423 20 1 -0.3933 0.4417 -0.7651 21 1 1.7923 -0.5138 0.8900 22 1 1.5879 2.4586 -1.2242 23 1 1.5613 2.4678 1.2086 24 1 0.9803 -2.5811 -0.7581 25 1 1.8440 -3.6873 -2.8062 26 1 3.9304 -2.0275 -5.2374 27 1 3.4292 -4.5611 -4.0944 28 1 1.9776 -4.0529 -4.9906 29 1 5.7668 -4.7794 -6.9471 30 1 5.6597 -4.4765 -5.1588 31 1 4.6769 -8.2066 -6.7708 32 1 5.8061 -7.0016 -7.4353 33 1 6.9108 -8.5603 -6.0016 34 1 2.3900 -6.1189 -6.2875 35 1 3.4632 -5.9365 -7.7423 36 1 2.9882 0.9869 -1.9698 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_16500646_13915762.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:27:18 Heat of formation + Delta-G solvation = -58.988910 kcal Electronic energy + Delta-G solvation = -20269.187421 eV Core-core repulsion = 16863.320912 eV Total energy + Delta-G solvation = -3405.866509 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 269.121 amu Computer time = 0.53 seconds Orbital eigenvalues (eV) -48.76983 -41.39880 -40.34225 -38.19984 -37.42181 -36.32449 -33.45230 -31.89153 -29.80165 -27.51354 -27.19963 -25.65156 -24.77845 -22.97864 -22.44951 -20.39208 -18.82092 -18.60383 -18.38519 -17.90571 -17.19964 -16.85670 -16.56376 -16.40004 -16.23811 -15.95112 -15.49160 -15.36482 -15.15210 -14.90232 -14.37307 -14.28915 -14.01575 -13.96059 -13.59895 -13.28359 -12.95154 -12.51586 -12.43297 -12.26618 -11.93984 -11.65564 -11.54260 -11.24187 -11.01871 -10.74980 -10.51969 -10.36093 -8.76132 -4.93473 0.24693 0.42409 1.32297 1.62297 1.90147 1.99670 2.80158 2.86419 2.98560 3.07567 3.09288 3.30237 3.40784 3.60499 3.72029 3.77715 3.99434 4.04142 4.08928 4.16105 4.18585 4.27397 4.32747 4.36693 4.43849 4.48108 4.53161 4.58084 4.73323 4.74506 4.86725 4.99864 5.13970 5.27505 5.47218 5.91751 6.42985 6.47011 6.54164 7.14649 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.532 6.532 2 C -0.059 4.059 3 Si 0.678 3.322 4 C -0.234 4.234 5 C -0.004 4.004 6 C -0.240 4.240 7 C 0.409 3.591 8 N -0.721 5.721 9 C 0.129 3.871 10 C 0.081 3.919 11 F -0.193 7.193 12 C -0.145 4.145 13 C -0.108 4.108 14 H 0.106 0.894 15 C 0.086 3.914 16 O -0.573 6.573 17 C -0.141 4.141 18 N -0.537 5.537 19 C 0.158 3.842 20 H 0.375 0.625 21 H 0.117 0.883 22 H -0.258 1.258 23 H -0.256 1.256 24 H 0.137 0.863 25 H 0.132 0.868 26 H 0.410 0.590 27 H 0.087 0.913 28 H 0.079 0.921 29 H 0.099 0.901 30 H 0.086 0.914 31 H 0.051 0.949 32 H 0.050 0.950 33 H 0.383 0.617 34 H 0.089 0.911 35 H 0.103 0.897 36 H 0.156 0.844 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.634 -4.315 -1.274 4.787 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.338 6.338 2 C -0.170 4.170 3 Si 0.579 3.421 4 C -0.239 4.239 5 C -0.030 4.030 6 C -0.265 4.265 7 C 0.174 3.826 8 N -0.354 5.354 9 C 0.003 3.997 10 C 0.062 3.938 11 F -0.174 7.174 12 C -0.183 4.183 13 C -0.126 4.126 14 H 0.124 0.876 15 C 0.008 3.992 16 O -0.379 6.379 17 C -0.179 4.179 18 N -0.254 5.254 19 C 0.000 4.000 20 H 0.223 0.777 21 H 0.135 0.865 22 H -0.183 1.183 23 H -0.180 1.180 24 H 0.154 0.846 25 H 0.150 0.850 26 H 0.247 0.753 27 H 0.105 0.895 28 H 0.097 0.903 29 H 0.117 0.883 30 H 0.104 0.896 31 H 0.069 0.931 32 H 0.068 0.932 33 H 0.230 0.770 34 H 0.107 0.893 35 H 0.122 0.878 36 H 0.173 0.827 Dipole moment (debyes) X Y Z Total from point charges 1.711 -3.060 -0.991 3.643 hybrid contribution -1.181 -0.833 -0.774 1.640 sum 0.530 -3.893 -1.766 4.308 Atomic orbital electron populations 1.86590 1.17961 1.79931 1.49341 1.24754 0.83683 1.10561 0.97967 0.95159 0.91712 0.74711 0.80512 1.20945 1.05939 0.96568 1.00425 1.21185 0.93751 0.93194 0.94838 1.21436 1.05635 1.01790 0.97618 1.18313 0.89274 0.88553 0.86497 1.44229 1.56530 1.11249 1.23433 1.21661 1.00490 0.82581 0.94932 1.22522 0.98832 0.86557 0.85875 1.92879 1.96779 1.66135 1.61566 1.23729 0.94867 0.95350 1.04358 1.22384 0.95478 0.93746 1.01022 0.87552 1.22108 0.89549 0.95708 0.91791 1.86481 1.48655 1.58051 1.44702 1.23618 0.99438 0.92622 1.02250 1.67140 1.27250 1.08994 1.21973 1.22232 0.91344 0.98680 0.87728 0.77706 0.86532 1.18296 1.18043 0.84556 0.84976 0.75279 0.89483 0.90314 0.88301 0.89575 0.93058 0.93197 0.76963 0.89264 0.87841 0.82725 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.69 12.78 -35.23 -0.45 -1.14 16 2 C -0.06 0.00 2.84 36.00 0.10 0.11 16 3 Si 0.68 -0.46 29.82 -169.99 -5.07 -5.53 16 4 C -0.23 -0.17 5.40 -104.46 -0.56 -0.74 16 5 C 0.00 0.00 9.76 -39.32 -0.38 -0.39 16 6 C -0.24 -0.18 9.33 -39.23 -0.37 -0.54 16 7 C 0.41 0.87 7.65 -155.00 -1.19 -0.32 16 8 N -0.72 -0.46 5.62 -60.42 -0.34 -0.80 16 9 C 0.13 -0.22 4.48 -4.04 -0.02 -0.23 16 10 C 0.08 -0.11 1.91 -89.80 -0.17 -0.28 16 11 F -0.19 -0.28 16.61 2.25 0.04 -0.25 16 12 C -0.15 0.23 7.06 -25.92 -0.18 0.04 16 13 C -0.11 0.25 3.66 -89.81 -0.33 -0.08 16 14 H 0.11 -0.24 7.72 -51.93 -0.40 -0.64 16 15 C 0.09 -0.19 6.89 37.15 0.26 0.07 16 16 O -0.57 0.34 13.66 -35.23 -0.48 -0.14 16 17 C -0.14 0.41 7.13 -25.91 -0.18 0.23 16 18 N -0.54 -1.75 10.39 -12.44 -0.13 -1.88 16 19 C 0.16 0.24 9.84 -17.57 -0.17 0.07 16 20 H 0.38 -0.48 8.70 45.56 0.40 -0.08 16 21 H 0.12 -0.10 7.96 -51.93 -0.41 -0.52 16 22 H -0.26 -0.36 7.11 56.52 0.40 0.04 16 23 H -0.26 -0.65 7.11 56.52 0.40 -0.25 16 24 H 0.14 -0.07 8.06 -52.49 -0.42 -0.50 16 25 H 0.13 -0.18 6.71 -52.49 -0.35 -0.53 16 26 H 0.41 0.47 8.15 -40.82 -0.33 0.13 16 27 H 0.09 -0.25 7.18 -51.93 -0.37 -0.62 16 28 H 0.08 -0.18 7.92 -51.93 -0.41 -0.59 16 29 H 0.10 -0.14 7.90 -51.93 -0.41 -0.55 16 30 H 0.09 -0.09 8.10 -51.93 -0.42 -0.51 16 31 H 0.05 -0.16 8.14 -51.93 -0.42 -0.58 16 32 H 0.05 -0.14 7.85 -51.93 -0.41 -0.55 16 33 H 0.38 -1.75 9.12 45.56 0.42 -1.34 16 34 H 0.09 -0.36 8.10 -51.93 -0.42 -0.78 16 35 H 0.10 -0.31 8.10 -51.93 -0.42 -0.73 16 36 H 0.16 -0.07 4.88 -52.48 -0.26 -0.33 16 LS Contribution 303.62 15.07 4.58 4.58 Total: 0.00 -7.24 303.62 -8.91 -16.15 By element: Atomic # 1 Polarization: -5.06 SS G_CDS: -3.85 Total: -8.91 kcal Atomic # 6 Polarization: 1.13 SS G_CDS: -3.20 Total: -2.07 kcal Atomic # 7 Polarization: -2.21 SS G_CDS: -0.47 Total: -2.68 kcal Atomic # 8 Polarization: -0.35 SS G_CDS: -0.93 Total: -1.28 kcal Atomic # 9 Polarization: -0.28 SS G_CDS: 0.04 Total: -0.25 kcal Atomic # 14 Polarization: -0.46 SS G_CDS: -5.07 Total: -5.53 kcal Total LS contribution 4.58 Total: 4.58 kcal Total: -7.24 -8.91 -16.15 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_16500646_13915762.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -42.843 kcal (2) G-P(sol) polarization free energy of solvation -7.240 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -50.083 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.906 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.146 kcal (6) G-S(sol) free energy of system = (1) + (5) -58.989 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.54 seconds